RNA–Protein interactions for RNA: ENST00000361654.8

CLIP1-203, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 5 BASIC

Gene CLIP1, Length 5,568 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-203ENST00000361654 PRSS27Q9BQR3 290 aa9.38□□□□□ -0.91
CLIP1-203ENST00000361654 ALKBH7Q9BT30 221 aaPredicted RBP9.38□□□□□ -0.91
CLIP1-203ENST00000361654 SRXN1Q9BYN0 137 aa9.38□□□□□ -0.91
CLIP1-203ENST00000361654 TNFSF18Q9UNG2 199 aa9.38□□□□□ -0.91
CLIP1-203ENST00000361654 KCNK7Q9Y2U2 307 aa9.38□□□□□ -0.91
CLIP1-203ENST00000361654 HOXA6P31267 233 aa9.38□□□□□ -0.91
CLIP1-203ENST00000361654 FAM74A4Q5TZK3 123 aa9.38□□□□□ -0.91
CLIP1-203ENST00000361654 TBX15Q96SF7 602 aa9.38□□□□□ -0.91
CLIP1-203ENST00000361654 HDHD3Q9BSH5 251 aaPredicted RBP9.38□□□□□ -0.91
CLIP1-203ENST00000361654 NUDT3O95989 172 aa9.38□□□□□ -0.91
CLIP1-203ENST00000361654 IGKV3-20P01619 116 aa9.38□□□□□ -0.91
CLIP1-203ENST00000361654 RPL29P47914 159 aaKnown RBP9.38□□□□□ -0.91
CLIP1-203ENST00000361654 CMC4P56277 68 aaPredicted RBP9.38□□□□□ -0.91
CLIP1-203ENST00000361654 DUX3Q96PT4 197 aa9.38□□□□□ -0.91
CLIP1-203ENST00000361654 MIXL1Q9H2W2 232 aa9.38□□□□□ -0.91
CLIP1-203ENST00000361654 SHROOM3Q8TF72 1996 aa9.38□□□□□ -0.91
CLIP1-203ENST00000361654 ELOA3CA0A087WX78 387 aaPredicted RBP9.37□□□□□ -0.91
CLIP1-203ENST00000361654 MFAP2P55001 183 aa9.37□□□□□ -0.91
CLIP1-203ENST00000361654 OR13A1Q8NGR1 328 aa9.37□□□□□ -0.91
CLIP1-203ENST00000361654 TNFRSF18Q9Y5U5 241 aa9.37□□□□□ -0.91
CLIP1-203ENST00000361654 IER3P46695 156 aa9.37□□□□□ -0.91
CLIP1-203ENST00000361654 CEBPDP49716 269 aaPredicted RBP9.37□□□□□ -0.91
CLIP1-203ENST00000361654 SUMO2P61956 95 aaKnown RBP9.37□□□□□ -0.91
CLIP1-203ENST00000361654 MAP1LC3AQ9H492 121 aa9.37□□□□□ -0.91
CLIP1-203ENST00000361654 PRR13Q9NZ81 148 aa9.37□□□□□ -0.91
CLIP1-203ENST00000361654 RGPD4Q7Z3J3 1758 aa9.37□□□□□ -0.91
CLIP1-203ENST00000361654 TRGV2A0A075B6R0 118 aa9.37□□□□□ -0.91
CLIP1-203ENST00000361654 TCRBV4S1A1TA0A5B7 111 aa9.37□□□□□ -0.91
CLIP1-203ENST00000361654 CDKN1AP38936 164 aa9.37□□□□□ -0.91
CLIP1-203ENST00000361654 SAPCD1Q5SSQ6 148 aa9.37□□□□□ -0.91
CLIP1-203ENST00000361654 UNQ6494/PRO21346Q6UXR6 183 aa9.37□□□□□ -0.91
CLIP1-203ENST00000361654 FER1L6Q2WGJ9 1857 aa9.37□□□□□ -0.91
CLIP1-203ENST00000361654 TRAV34A0A0B4J273 112 aa9.37□□□□□ -0.91
CLIP1-203ENST00000361654 LOC389332A0A1B0GUA5 103 aa9.37□□□□□ -0.91
CLIP1-203ENST00000361654 TMEM8BA6NDV4 472 aa9.37□□□□□ -0.91
CLIP1-203ENST00000361654 RBFOX2O43251 390 aaKnown RBP eCLIP9.37□□□□□ -0.913e-7■■■□□ 15.9
CLIP1-203ENST00000361654 SEC11BP0C7V7 166 aa9.37□□□□□ -0.91
CLIP1-203ENST00000361654 WNT5BQ9H1J7 359 aa9.37□□□□□ -0.91
CLIP1-203ENST00000361654 PLAUP00749 431 aa9.37□□□□□ -0.91
CLIP1-203ENST00000361654 IGF2P01344 180 aa9.37□□□□□ -0.91
CLIP1-203ENST00000361654 RNASE1P07998 156 aaKnown RBP9.37□□□□□ -0.91
CLIP1-203ENST00000361654 C8orf88P0DMB2 117 aa9.37□□□□□ -0.91
CLIP1-203ENST00000361654 SCGB1A1P11684 91 aa9.37□□□□□ -0.91
CLIP1-203ENST00000361654 LGALS3P17931 250 aaKnown RBP9.37□□□□□ -0.91
CLIP1-203ENST00000361654 CXCL3P19876 107 aa9.37□□□□□ -0.91
CLIP1-203ENST00000361654 CD69Q07108 199 aa9.37□□□□□ -0.91
CLIP1-203ENST00000361654 ZNF146Q15072 292 aa9.37□□□□□ -0.91
CLIP1-203ENST00000361654 DTX2Q86UW9 622 aa9.37□□□□□ -0.91
CLIP1-203ENST00000361654 FAM24BQ8N5W8 94 aa9.37□□□□□ -0.91
CLIP1-203ENST00000361654 GPR61Q9BZJ8 451 aa9.37□□□□□ -0.91
CLIP1-203ENST00000361654 FBXL7Q9UJT9 491 aa9.37□□□□□ -0.91
CLIP1-203ENST00000361654 SCTP09683 121 aa9.36□□□□□ -0.91
CLIP1-203ENST00000361654 VAX1Q5SQQ9 334 aa9.36□□□□□ -0.91
CLIP1-203ENST00000361654 H1FOOQ8IZA3 346 aaPredicted RBP9.36□□□□□ -0.91
CLIP1-203ENST00000361654 OR10D4PQ8NGN7 298 aa9.36□□□□□ -0.91
CLIP1-203ENST00000361654 SIGLEC12Q96PQ1 595 aa9.36□□□□□ -0.91
CLIP1-203ENST00000361654 OR4C46A6NHA9 309 aa9.36□□□□□ -0.91
CLIP1-203ENST00000361654 IL4P05112 153 aa9.36□□□□□ -0.91
CLIP1-203ENST00000361654 CECR9P0C854 216 aa9.36□□□□□ -0.91
CLIP1-203ENST00000361654 CLDND2Q8NHS1 167 aa9.36□□□□□ -0.91
CLIP1-203ENST00000361654 SCARF2Q96GP6 870 aaPredicted RBP9.36□□□□□ -0.91
CLIP1-203ENST00000361654 LINC01587Q99440 93 aa9.36□□□□□ -0.91
CLIP1-203ENST00000361654 ELF5Q9UKW6 265 aaPredicted RBP9.36□□□□□ -0.91
CLIP1-203ENST00000361654 TRIOBPQ9H2D6 2365 aa9.36□□□□□ -0.91
CLIP1-203ENST00000361654 ADAMTS7Q9UKP4 1686 aa9.36□□□□□ -0.91
CLIP1-203ENST00000361654 IFITM10A6NMD0 228 aa9.36□□□□□ -0.91
CLIP1-203ENST00000361654 H3BVH4 76 aa9.36□□□□□ -0.91
CLIP1-203ENST00000361654 TCF24Q7RTU0 167 aa9.36□□□□□ -0.91
CLIP1-203ENST00000361654 OSR1Q8TAX0 266 aaPredicted RBP9.36□□□□□ -0.91
CLIP1-203ENST00000361654 TMEM222Q9H0R3 208 aa9.36□□□□□ -0.91
CLIP1-203ENST00000361654 ATG2BQ96BY7 2078 aa9.36□□□□□ -0.91
CLIP1-203ENST00000361654 IGKV1-8A0A0C4DH67 115 aa9.36□□□□□ -0.91
CLIP1-203ENST00000361654 ZNF98A6NK75 572 aa9.36□□□□□ -0.91
CLIP1-203ENST00000361654 GLIPR1P48060 266 aa9.36□□□□□ -0.91
CLIP1-203ENST00000361654 SNRPEP62304 92 aaKnown RBP9.36□□□□□ -0.91
CLIP1-203ENST00000361654 COLCA1Q6ZS62 124 aa9.36□□□□□ -0.91
CLIP1-203ENST00000361654 STHQ8IWL8 128 aa9.36□□□□□ -0.91
CLIP1-203ENST00000361654 OR11H7Q8NGC8 314 aa9.36□□□□□ -0.91
CLIP1-203ENST00000361654 HSF4Q9ULV5 492 aa9.36□□□□□ -0.91
CLIP1-203ENST00000361654 C20orf204Q6ZNR8 217 aa9.35□□□□□ -0.91
CLIP1-203ENST00000361654 FGFRL1Q8N441 504 aa9.35□□□□□ -0.91
CLIP1-203ENST00000361654 TMEM70Q9BUB7 260 aa9.35□□□□□ -0.91
CLIP1-203ENST00000361654 COL25A1Q9BXS0 654 aaPredicted RBP9.35□□□□□ -0.91
CLIP1-203ENST00000361654 RBKSQ9H477 322 aa9.35□□□□□ -0.91
CLIP1-203ENST00000361654 UNC13CQ8NB66 2214 aa9.35□□□□□ -0.91
CLIP1-203ENST00000361654 MOSP00540 346 aa9.35□□□□□ -0.91
CLIP1-203ENST00000361654 IGKV1D-33P01593 117 aa9.35□□□□□ -0.91
CLIP1-203ENST00000361654 IGKV1-33P01594 117 aa9.35□□□□□ -0.91
CLIP1-203ENST00000361654 MT-ND6P03923 174 aa9.35□□□□□ -0.91
CLIP1-203ENST00000361654 UNC119Q13432 240 aa9.35□□□□□ -0.91
CLIP1-203ENST00000361654 SLC25A28Q96A46 364 aa9.35□□□□□ -0.91
CLIP1-203ENST00000361654 MRPL32Q9BYC8 188 aaKnown RBP9.35□□□□□ -0.91
CLIP1-203ENST00000361654 OR51M1Q9H341 326 aa9.35□□□□□ -0.91
CLIP1-203ENST00000361654 CBY3A6NI87 242 aa9.35□□□□□ -0.91
CLIP1-203ENST00000361654 MARCH11A6NNE9 402 aa9.35□□□□□ -0.91
CLIP1-203ENST00000361654 THBDP07204 575 aa9.35□□□□□ -0.91
CLIP1-203ENST00000361654 C10orf128Q5T292 105 aa9.35□□□□□ -0.91
CLIP1-203ENST00000361654 AHCTF1Q8WYP5 2266 aa9.35□□□□□ -0.91
CLIP1-203ENST00000361654 C17orf100A8MU93 164 aa9.35□□□□□ -0.91
CLIP1-203ENST00000361654 C9JCJ5 164 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms