RNA–Protein interactions for RNA: ENST00000360264.7

CUX1-203, Transcript of cut like homeobox 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CUX1, Length 13,762 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-203ENST00000360264 NPFFO15130 113 aa8.38□□□□□ -1.07
CUX1-203ENST00000360264 CEACAM4O75871 244 aa8.38□□□□□ -1.07
CUX1-203ENST00000360264 RNASE1P07998 156 aaKnown RBP8.38□□□□□ -1.07
CUX1-203ENST00000360264 PSG2P11465 335 aa8.38□□□□□ -1.07
CUX1-203ENST00000360264 CCL4P13236 92 aa8.38□□□□□ -1.07
CUX1-203ENST00000360264 MPV17P39210 176 aa8.38□□□□□ -1.07
CUX1-203ENST00000360264 PDLIM4P50479 330 aa8.38□□□□□ -1.07
CUX1-203ENST00000360264 B9A039 149 aa8.38□□□□□ -1.07
CUX1-203ENST00000360264 FAM209BQ5JX69 171 aa8.38□□□□□ -1.07
CUX1-203ENST00000360264 DNLZQ5SXM8 178 aa8.38□□□□□ -1.07
CUX1-203ENST00000360264 DUX5Q96PT3 197 aa8.38□□□□□ -1.07
CUX1-203ENST00000360264 A0A1B0GTL3 188 aa8.38□□□□□ -1.07
CUX1-203ENST00000360264 OR4A47Q6IF82 309 aa8.38□□□□□ -1.07
CUX1-203ENST00000360264 GUCD1Q96NT3 240 aa8.38□□□□□ -1.07
CUX1-203ENST00000360264 MRPL13Q9BYD1 178 aaKnown RBP8.38□□□□□ -1.07
CUX1-203ENST00000360264 SMOC1Q9H4F8 434 aa8.38□□□□□ -1.07
CUX1-203ENST00000360264 OR10AC1Q8NH08 325 aa8.38□□□□□ -1.07
CUX1-203ENST00000360264 OR2H2O95918 312 aa8.38□□□□□ -1.07
CUX1-203ENST00000360264 KLRB1Q12918 225 aa8.38□□□□□ -1.07
CUX1-203ENST00000360264 ODAMA1E959 279 aa8.38□□□□□ -1.07
CUX1-203ENST00000360264 RECKO95980 971 aa8.38□□□□□ -1.07
CUX1-203ENST00000360264 UBE2V2Q15819 145 aa8.38□□□□□ -1.07
CUX1-203ENST00000360264 TSPO2Q5TGU0 170 aa8.38□□□□□ -1.07
CUX1-203ENST00000360264 TMEM186Q96B77 213 aa8.38□□□□□ -1.07
CUX1-203ENST00000360264 RCC2Q9P258 522 aaKnown RBP8.38□□□□□ -1.07
CUX1-203ENST00000360264 C7orf66A4D0T2 115 aa8.38□□□□□ -1.07
CUX1-203ENST00000360264 PF4P02776 101 aa8.38□□□□□ -1.07
CUX1-203ENST00000360264 APELAP0DMC3 54 aa8.38□□□□□ -1.07
CUX1-203ENST00000360264 PRSS27Q9BQR3 290 aa8.38□□□□□ -1.07
CUX1-203ENST00000360264 GP6Q9HCN6 339 aa8.38□□□□□ -1.07
CUX1-203ENST00000360264 MTORP42345 2549 aa8.38□□□□□ -1.07
CUX1-203ENST00000360264 DIRC3C9JPN6 131 aa8.38□□□□□ -1.07
CUX1-203ENST00000360264 TMEM250H0YL14 139 aa8.38□□□□□ -1.07
CUX1-203ENST00000360264 MEF2BQ02080 365 aaPredicted RBP8.38□□□□□ -1.07
CUX1-203ENST00000360264 PIGYQ3MUY2 71 aa8.38□□□□□ -1.07
CUX1-203ENST00000360264 RIPPLY2Q5TAB7 128 aa8.38□□□□□ -1.07
CUX1-203ENST00000360264 CHODLQ9H9P2 273 aa8.38□□□□□ -1.07
CUX1-203ENST00000360264 NPPCP23582 126 aa8.38□□□□□ -1.07
CUX1-203ENST00000360264 CYB5R3P00387 301 aaPredicted RBP8.38□□□□□ -1.07
CUX1-203ENST00000360264 LIPFP07098 398 aa8.38□□□□□ -1.07
CUX1-203ENST00000360264 FCGR3AP08637 254 aa8.38□□□□□ -1.07
CUX1-203ENST00000360264 COL9A1P20849 921 aa8.38□□□□□ -1.07
CUX1-203ENST00000360264 MEIG1Q5JSS6 88 aa8.38□□□□□ -1.07
CUX1-203ENST00000360264 TCF23Q7RTU1 214 aa8.38□□□□□ -1.07
CUX1-203ENST00000360264 PLP1P60201 277 aa8.37□□□□□ -1.07
CUX1-203ENST00000360264 JPT1Q9UK76 154 aa8.37□□□□□ -1.07
CUX1-203ENST00000360264 ANAPC1Q9H1A4 1944 aa8.37□□□□□ -1.07
CUX1-203ENST00000360264 OR8G5Q8NG78 346 aa8.37□□□□□ -1.07
CUX1-203ENST00000360264 RPP25Q9BUL9 199 aaKnown RBP8.37□□□□□ -1.07
CUX1-203ENST00000360264 PPIAL4CA0A0B4J2A2 164 aa8.37□□□□□ -1.07
CUX1-203ENST00000360264 A0A1W2PPC1 479 aa8.37□□□□□ -1.07
CUX1-203ENST00000360264 PPIAL4GP0DN37 164 aa8.37□□□□□ -1.07
CUX1-203ENST00000360264 SOSTQ9BQB4 213 aa8.37□□□□□ -1.07
CUX1-203ENST00000360264 K7ERU9 68 aa8.37□□□□□ -1.07
CUX1-203ENST00000360264 CX3CL1P78423 397 aa8.37□□□□□ -1.07
CUX1-203ENST00000360264 CCL13Q99616 98 aa8.37□□□□□ -1.07
CUX1-203ENST00000360264 GPX1P07203 203 aa8.37□□□□□ -1.07
CUX1-203ENST00000360264 PAX1P15863 534 aa8.37□□□□□ -1.07
CUX1-203ENST00000360264 REG1BP48304 166 aa8.37□□□□□ -1.07
CUX1-203ENST00000360264 CCL8P80075 99 aa8.37□□□□□ -1.07
CUX1-203ENST00000360264 FBLL1A6NHQ2 334 aaKnown RBP8.37□□□□□ -1.07
CUX1-203ENST00000360264 ISG15P05161 165 aa8.37□□□□□ -1.07
CUX1-203ENST00000360264 MUC1P15941 1255 aaPredicted RBP8.37□□□□□ -1.07
CUX1-203ENST00000360264 CALYQ9NYX4 217 aa8.37□□□□□ -1.07
CUX1-203ENST00000360264 H3BRM9 83 aa8.37□□□□□ -1.07
CUX1-203ENST00000360264 DLX6P56179 175 aa8.37□□□□□ -1.07
CUX1-203ENST00000360264 ADAD2Q8NCV1 583 aaKnown RBP8.37□□□□□ -1.07
CUX1-203ENST00000360264 CISD1Q9NZ45 108 aaKnown RBP8.37□□□□□ -1.07
CUX1-203ENST00000360264 METTL1Q9UBP6 276 aaKnown RBP8.37□□□□□ -1.07
CUX1-203ENST00000360264 ATP6V0CP27449 155 aa8.37□□□□□ -1.07
CUX1-203ENST00000360264 C2orf83Q53S99 150 aa8.37□□□□□ -1.07
CUX1-203ENST00000360264 DNAJC4Q9NNZ3 241 aa8.37□□□□□ -1.07
CUX1-203ENST00000360264 SPNP16150 400 aa8.37□□□□□ -1.07
CUX1-203ENST00000360264 SLC25A53Q5H9E4 307 aa8.37□□□□□ -1.07
CUX1-203ENST00000360264 CLDND2Q8NHS1 167 aa8.37□□□□□ -1.07
CUX1-203ENST00000360264 MRPS18AQ9NVS2 196 aaKnown RBP8.37□□□□□ -1.07
CUX1-203ENST00000360264 NCOR2Q9Y618 2525 aa8.37□□□□□ -1.07
CUX1-203ENST00000360264 FOXB2Q5VYV0 432 aa8.37□□□□□ -1.07
CUX1-203ENST00000360264 HCP5Q6MZN7 132 aa8.37□□□□□ -1.07
CUX1-203ENST00000360264 AGRNO00468 2067 aa8.37□□□□□ -1.07
CUX1-203ENST00000360264 FXYD3Q14802 87 aa8.37□□□□□ -1.07
CUX1-203ENST00000360264 ZNF385CQ66K41 422 aaPredicted RBP8.37□□□□□ -1.07
CUX1-203ENST00000360264 IL17BQ9UHF5 180 aa8.37□□□□□ -1.07
CUX1-203ENST00000360264 TCL1AP56279 114 aa8.36□□□□□ -1.07
CUX1-203ENST00000360264 DSCAML1Q8TD84 2053 aa8.36□□□□□ -1.07
CUX1-203ENST00000360264 SUMO2P61956 95 aaKnown RBP8.36□□□□□ -1.07
CUX1-203ENST00000360264 OR1K1Q8NGR3 316 aa8.36□□□□□ -1.07
CUX1-203ENST00000360264 TMEM190Q8WZ59 177 aa8.36□□□□□ -1.07
CUX1-203ENST00000360264 MRPL24Q96A35 216 aaKnown RBP8.36□□□□□ -1.07
CUX1-203ENST00000360264 POM121Q96HA1 1249 aa8.36□□□□□ -1.07
CUX1-203ENST00000360264 IL36RNQ9UBH0 155 aa8.36□□□□□ -1.07
CUX1-203ENST00000360264 PAM16Q9Y3D7 125 aa8.36□□□□□ -1.07
CUX1-203ENST00000360264 LOC107984156A0A0G2JMH3 177 aa8.36□□□□□ -1.07
CUX1-203ENST00000360264 ZNF205O95201 554 aa8.36□□□□□ -1.07
CUX1-203ENST00000360264 HLA-DRB1P01911 266 aa8.36□□□□□ -1.07
CUX1-203ENST00000360264 SMUG1Q53HV7 270 aa8.36□□□□□ -1.07
CUX1-203ENST00000360264 ARL17AQ8IVW1 177 aa8.36□□□□□ -1.07
CUX1-203ENST00000360264 FLRT3Q9NZU0 649 aa8.36□□□□□ -1.07
CUX1-203ENST00000360264 SPINT1O43278 529 aa8.36□□□□□ -1.07
CUX1-203ENST00000360264 CD74P04233 296 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms