RNA–Protein interactions for RNA: ENST00000358511.10

COL6A6-201, Transcript of collagen type VI alpha 6 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL6A6, Length 9,581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A6-201ENST00000358511 GABRG3Q99928 467 aa7.6□□□□□ -1.19
COL6A6-201ENST00000358511 SNRPCP09234 159 aaKnown RBP7.6□□□□□ -1.19
COL6A6-201ENST00000358511 OR4A8P0C604 315 aa7.6□□□□□ -1.19
COL6A6-201ENST00000358511 ALKBH6Q3KRA9 238 aa7.6□□□□□ -1.19
COL6A6-201ENST00000358511 ZNF841Q6ZN19 808 aa7.6□□□□□ -1.19
COL6A6-201ENST00000358511 MED13LQ71F56 2210 aa7.6□□□□□ -1.19
COL6A6-201ENST00000358511 CXorf66Q5JRM2 361 aaPredicted RBP7.6□□□□□ -1.19
COL6A6-201ENST00000358511 SF3B5Q9BWJ5 86 aaKnown RBP7.6□□□□□ -1.19
COL6A6-201ENST00000358511 CXXC4Q9H2H0 198 aa7.6□□□□□ -1.19
COL6A6-201ENST00000358511 ASCL3Q9NQ33 180 aa7.6□□□□□ -1.19
COL6A6-201ENST00000358511 IL2RAP01589 272 aa7.6□□□□□ -1.19
COL6A6-201ENST00000358511 C2orf68Q2NKX9 166 aa7.6□□□□□ -1.19
COL6A6-201ENST00000358511 BIVMQ86UB2 503 aa7.6□□□□□ -1.19
COL6A6-201ENST00000358511 C19orf24Q9BVV8 132 aa7.6□□□□□ -1.19
COL6A6-201ENST00000358511 MAP1LC3AQ9H492 121 aa7.6□□□□□ -1.19
COL6A6-201ENST00000358511 NEUROG1Q92886 237 aa7.6□□□□□ -1.19
COL6A6-201ENST00000358511 GNRHR2Q96P88 292 aa7.6□□□□□ -1.19
COL6A6-201ENST00000358511 EDA2RQ9HAV5 297 aa7.6□□□□□ -1.19
COL6A6-201ENST00000358511 NDUFB3O43676 98 aa7.59□□□□□ -1.19
COL6A6-201ENST00000358511 OR5A1Q8NGJ0 315 aa7.59□□□□□ -1.19
COL6A6-201ENST00000358511 OR1L8Q8NGR8 309 aa7.59□□□□□ -1.19
COL6A6-201ENST00000358511 GRAMD2BQ96HH9 432 aa7.59□□□□□ -1.19
COL6A6-201ENST00000358511 SPCS1Q9Y6A9 102 aa7.59□□□□□ -1.19
COL6A6-201ENST00000358511 OR2H1Q9GZK4 316 aa7.59□□□□□ -1.19
COL6A6-201ENST00000358511 J3QR06 171 aa7.59□□□□□ -1.19
COL6A6-201ENST00000358511 WNT5AP41221 380 aa7.59□□□□□ -1.19
COL6A6-201ENST00000358511 SARAFQ96BY9 339 aa7.59□□□□□ -1.19
COL6A6-201ENST00000358511 SMOC1Q9H4F8 434 aa7.59□□□□□ -1.19
COL6A6-201ENST00000358511 C1QCP02747 245 aa7.59□□□□□ -1.19
COL6A6-201ENST00000358511 SRP19P09132 144 aaKnown RBP7.59□□□□□ -1.19
COL6A6-201ENST00000358511 CSRP3P50461 194 aa7.59□□□□□ -1.19
COL6A6-201ENST00000358511 MRPS11P82912 194 aaKnown RBP7.59□□□□□ -1.19
COL6A6-201ENST00000358511 TCF24Q7RTU0 167 aa7.59□□□□□ -1.19
COL6A6-201ENST00000358511 LRRC29Q8WV35 223 aa7.59□□□□□ -1.19
COL6A6-201ENST00000358511 SIGMAR1Q99720 223 aa7.59□□□□□ -1.19
COL6A6-201ENST00000358511 CCL2P13500 99 aa7.59□□□□□ -1.19
COL6A6-201ENST00000358511 SELENOTP62341 195 aa7.59□□□□□ -1.19
COL6A6-201ENST00000358511 CENPWQ5EE01 88 aa7.59□□□□□ -1.19
COL6A6-201ENST00000358511 PSMG4Q5JS54 123 aa7.59□□□□□ -1.19
COL6A6-201ENST00000358511 PGLYRP4Q96LB8 373 aa7.59□□□□□ -1.19
COL6A6-201ENST00000358511 HARBI1Q96MB7 349 aa7.59□□□□□ -1.19
COL6A6-201ENST00000358511 PRDM13Q9H4Q3 707 aa7.59□□□□□ -1.19
COL6A6-201ENST00000358511 ELOVL5Q9NYP7 299 aa7.59□□□□□ -1.19
COL6A6-201ENST00000358511 HIGD1AQ9Y241 93 aa7.59□□□□□ -1.19
COL6A6-201ENST00000358511 LTBP4Q8N2S1 1624 aa7.59□□□□□ -1.19
COL6A6-201ENST00000358511 RNF222A6NCQ9 220 aa7.59□□□□□ -1.19
COL6A6-201ENST00000358511 GZMHP20718 246 aa7.59□□□□□ -1.19
COL6A6-201ENST00000358511 FAM216AQ8WUB2 273 aa7.59□□□□□ -1.19
COL6A6-201ENST00000358511 TMEM170AQ8WVE7 144 aa7.59□□□□□ -1.19
COL6A6-201ENST00000358511 MARS2Q96GW9 593 aaKnown RBP7.59□□□□□ -1.19
COL6A6-201ENST00000358511 TMEM106BQ9NUM4 274 aa7.59□□□□□ -1.19
COL6A6-201ENST00000358511 SLC17A3O00476 420 aa7.59□□□□□ -1.2
COL6A6-201ENST00000358511 SPRY3O43610 288 aa7.59□□□□□ -1.2
COL6A6-201ENST00000358511 SELENOHQ8IZQ5 122 aaKnown RBP7.59□□□□□ -1.2
COL6A6-201ENST00000358511 MMP17Q9ULZ9 603 aa7.59□□□□□ -1.2
COL6A6-201ENST00000358511 FXYD3Q14802 87 aa7.58□□□□□ -1.2
COL6A6-201ENST00000358511 DEFB127Q9H1M4 99 aa7.58□□□□□ -1.2
COL6A6-201ENST00000358511 ZNF430Q9H8G1 570 aaPredicted RBP7.58□□□□□ -1.2
COL6A6-201ENST00000358511 HSPB7Q9UBY9 170 aa7.58□□□□□ -1.2
COL6A6-201ENST00000358511 SPTY2D1-AS1A0A0U1RR47 76 aa7.58□□□□□ -1.2
COL6A6-201ENST00000358511 GNG7O60262 68 aa7.58□□□□□ -1.2
COL6A6-201ENST00000358511 NDUFS6O75380 124 aaKnown RBP7.58□□□□□ -1.2
COL6A6-201ENST00000358511 TMEM187Q14656 261 aa7.58□□□□□ -1.2
COL6A6-201ENST00000358511 SPANXN1Q5VSR9 72 aa7.58□□□□□ -1.2
COL6A6-201ENST00000358511 HIST3H2BBQ8N257 126 aa7.58□□□□□ -1.2
COL6A6-201ENST00000358511 NEU1Q99519 415 aa7.58□□□□□ -1.2
COL6A6-201ENST00000358511 PKIBQ9C010 78 aa7.58□□□□□ -1.2
COL6A6-201ENST00000358511 MED13Q9UHV7 2174 aa7.58□□□□□ -1.2
COL6A6-201ENST00000358511 IGKV3OR2-268A0A0C4DH90 116 aa7.58□□□□□ -1.2
COL6A6-201ENST00000358511 FAM90A10PA6NDY2 464 aa7.58□□□□□ -1.2
COL6A6-201ENST00000358511 FAM90A18PA6NE21 464 aa7.58□□□□□ -1.2
COL6A6-201ENST00000358511 FAM90A16PA6NEW6 464 aa7.58□□□□□ -1.2
COL6A6-201ENST00000358511 FAM90A20PA6NIJ5 464 aa7.58□□□□□ -1.2
COL6A6-201ENST00000358511 FAM90A8PA6NJQ4 464 aa7.58□□□□□ -1.2
COL6A6-201ENST00000358511 FAM90A7PA6NKC0 464 aa7.58□□□□□ -1.2
COL6A6-201ENST00000358511 FAM90A22PA8MWA6 464 aa7.58□□□□□ -1.2
COL6A6-201ENST00000358511 FAM90A12PA8MX19 464 aa7.58□□□□□ -1.2
COL6A6-201ENST00000358511 FAM90A5PA8MXJ8 464 aa7.58□□□□□ -1.2
COL6A6-201ENST00000358511 FAM90A23PA8MXZ1 464 aa7.58□□□□□ -1.2
COL6A6-201ENST00000358511 F8VVB4 439 aa7.58□□□□□ -1.2
COL6A6-201ENST00000358511 F8VWA3 439 aa7.58□□□□□ -1.2
COL6A6-201ENST00000358511 FAM90A15PP0C7V4 464 aa7.58□□□□□ -1.2
COL6A6-201ENST00000358511 FAM90A13PP0C7W8 464 aa7.58□□□□□ -1.2
COL6A6-201ENST00000358511 FAM90A14PP0C7W9 464 aa7.58□□□□□ -1.2
COL6A6-201ENST00000358511 FAM90A24PP0C7X0 464 aa7.58□□□□□ -1.2
COL6A6-201ENST00000358511 KIAA1644Q3SXP7 199 aa7.58□□□□□ -1.2
COL6A6-201ENST00000358511 BEND2Q8NDZ0 799 aa7.58□□□□□ -1.2
COL6A6-201ENST00000358511 IMMP2LQ96T52 175 aa7.58□□□□□ -1.2
COL6A6-201ENST00000358511 SOSTQ9BQB4 213 aa7.58□□□□□ -1.2
COL6A6-201ENST00000358511 FAM222BQ8WU58 562 aa7.58□□□□□ -1.2
COL6A6-201ENST00000358511 R3HDMLQ9H3Y0 253 aa7.58□□□□□ -1.2
COL6A6-201ENST00000358511 TMEM242Q9NWH2 141 aa7.58□□□□□ -1.2
COL6A6-201ENST00000358511 SHISA7A6NL88 538 aa7.58□□□□□ -1.2
COL6A6-201ENST00000358511 C1QTNF9BB2RNN3 333 aa7.58□□□□□ -1.2
COL6A6-201ENST00000358511 TNFSF14O43557 240 aa7.58□□□□□ -1.2
COL6A6-201ENST00000358511 IGHV3-13P01766 116 aa7.58□□□□□ -1.2
COL6A6-201ENST00000358511 IGHV3-7P01780 117 aa7.58□□□□□ -1.2
COL6A6-201ENST00000358511 RHBDD2Q6NTF9 364 aa7.58□□□□□ -1.2
COL6A6-201ENST00000358511 ZNF418Q8TF45 676 aaPredicted RBP7.58□□□□□ -1.2
COL6A6-201ENST00000358511 GPR146Q96CH1 333 aa7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms