RNA–Protein interactions for RNA: ENST00000358392.6

COL11A1-202, Transcript of collagen type XI alpha 1 chain, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene COL11A1, Length 7,327 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-202ENST00000358392 A0A1W2PQD3 144 aa9.63□□□□□ -0.87
COL11A1-202ENST00000358392 TNFSF14O43557 240 aa9.63□□□□□ -0.87
COL11A1-202ENST00000358392 UCP2P55851 309 aa9.63□□□□□ -0.87
COL11A1-202ENST00000358392 MEF2CQ06413 473 aaPredicted RBP9.63□□□□□ -0.87
COL11A1-202ENST00000358392 C1QTNF12Q5T7M4 302 aa9.63□□□□□ -0.87
COL11A1-202ENST00000358392 TUBD1Q9UJT1 453 aa9.63□□□□□ -0.87
COL11A1-202ENST00000358392 KNTC1P50748 2209 aa9.63□□□□□ -0.87
COL11A1-202ENST00000358392 HOXD4P09016 255 aaPredicted RBP9.63□□□□□ -0.87
COL11A1-202ENST00000358392 FGFRL1Q8N441 504 aa9.63□□□□□ -0.87
COL11A1-202ENST00000358392 ZNF414Q96IQ9 312 aa9.63□□□□□ -0.87
COL11A1-202ENST00000358392 IMMP2LQ96T52 175 aa9.63□□□□□ -0.87
COL11A1-202ENST00000358392 KCNE5Q9UJ90 142 aa9.63□□□□□ -0.87
COL11A1-202ENST00000358392 DRD3P35462 400 aa9.63□□□□□ -0.87
COL11A1-202ENST00000358392 TCF24Q7RTU0 167 aa9.63□□□□□ -0.87
COL11A1-202ENST00000358392 TRBV7-9A0A0J9YWB2 115 aa9.63□□□□□ -0.87
COL11A1-202ENST00000358392 SPAARA0A1B0GVQ0 90 aa9.63□□□□□ -0.87
COL11A1-202ENST00000358392 MFAP4P55083 255 aa9.63□□□□□ -0.87
COL11A1-202ENST00000358392 TMEM101Q96IK0 257 aa9.63□□□□□ -0.87
COL11A1-202ENST00000358392 DCTN5Q9BTE1 182 aa9.63□□□□□ -0.87
COL11A1-202ENST00000358392 DERL1Q9BUN8 251 aa9.63□□□□□ -0.87
COL11A1-202ENST00000358392 PEF1Q9UBV8 284 aaKnown RBP9.63□□□□□ -0.87
COL11A1-202ENST00000358392 ZNF107Q9UII5 783 aaPredicted RBP9.63□□□□□ -0.87
COL11A1-202ENST00000358392 CEACAM21Q3KPI0 293 aa9.63□□□□□ -0.87
COL11A1-202ENST00000358392 DPH3P1Q9H4G8 78 aa9.63□□□□□ -0.87
COL11A1-202ENST00000358392 PATE3B3GLJ2 98 aa9.63□□□□□ -0.87
COL11A1-202ENST00000358392 S1PR2O95136 353 aa9.63□□□□□ -0.87
COL11A1-202ENST00000358392 CFDP00746 253 aaPredicted RBP9.63□□□□□ -0.87
COL11A1-202ENST00000358392 FAM159AQ6UWV7 190 aa9.63□□□□□ -0.87
COL11A1-202ENST00000358392 CISD1Q9NZ45 108 aaKnown RBP9.63□□□□□ -0.87
COL11A1-202ENST00000358392 SF3B6Q9Y3B4 125 aaKnown RBP9.63□□□□□ -0.87
COL11A1-202ENST00000358392 DOCK2Q92608 1830 aa9.63□□□□□ -0.87
COL11A1-202ENST00000358392 DPRXA6NFQ7 191 aa9.62□□□□□ -0.87
COL11A1-202ENST00000358392 IGKV1D-16P01601 117 aa9.62□□□□□ -0.87
COL11A1-202ENST00000358392 STAG3L3P0CL85 134 aa9.62□□□□□ -0.87
COL11A1-202ENST00000358392 HTN3P15516 51 aa9.62□□□□□ -0.87
COL11A1-202ENST00000358392 CENPWQ5EE01 88 aa9.62□□□□□ -0.87
COL11A1-202ENST00000358392 MTURNQ8N3F0 131 aa9.62□□□□□ -0.87
COL11A1-202ENST00000358392 WDR34Q96EX3 536 aa9.62□□□□□ -0.87
COL11A1-202ENST00000358392 NMBP08949 121 aa9.62□□□□□ -0.87
COL11A1-202ENST00000358392 TMEM222Q9H0R3 208 aa9.62□□□□□ -0.87
COL11A1-202ENST00000358392 P2RY4P51582 365 aa9.62□□□□□ -0.87
COL11A1-202ENST00000358392 C1orf185Q5T7R7 199 aa9.62□□□□□ -0.87
COL11A1-202ENST00000358392 NRAPQ86VF7 1730 aa9.62□□□□□ -0.87
COL11A1-202ENST00000358392 KLF4O43474 513 aa9.62□□□□□ -0.87
COL11A1-202ENST00000358392 LINC00305Q7Z4B0 112 aa9.62□□□□□ -0.87
COL11A1-202ENST00000358392 TMEM52Q8NDY8 209 aa9.62□□□□□ -0.87
COL11A1-202ENST00000358392 TRAV8-2A0A0B4J237 113 aa9.62□□□□□ -0.87
COL11A1-202ENST00000358392 A0A1W2PPC1 479 aa9.62□□□□□ -0.87
COL11A1-202ENST00000358392 SLC17A3O00476 420 aa9.62□□□□□ -0.87
COL11A1-202ENST00000358392 SMAD7O15105 426 aaKnown RBP9.62□□□□□ -0.87
COL11A1-202ENST00000358392 FGF12P61328 243 aa9.62□□□□□ -0.87
COL11A1-202ENST00000358392 LAMTOR1Q6IAA8 161 aa9.62□□□□□ -0.87
COL11A1-202ENST00000358392 PMCHL2Q9BQD1 86 aa9.62□□□□□ -0.87
COL11A1-202ENST00000358392 ALKBH7Q9BT30 221 aaPredicted RBP9.62□□□□□ -0.87
COL11A1-202ENST00000358392 REPIN1Q9BWE0 567 aaKnown RBP9.62□□□□□ -0.87
COL11A1-202ENST00000358392 RPS11P62280 158 aaKnown RBP eCLIP9.62□□□□□ -0.87
COL11A1-202ENST00000358392 STPG3Q8N7X2 389 aa9.62□□□□□ -0.87
COL11A1-202ENST00000358392 DIRC2Q96SL1 478 aa9.62□□□□□ -0.87
COL11A1-202ENST00000358392 TJP1Q07157 1748 aa9.61□□□□□ -0.87
COL11A1-202ENST00000358392 PRB4P10163 310 aaPredicted RBP9.61□□□□□ -0.87
COL11A1-202ENST00000358392 COX14Q96I36 57 aa9.61□□□□□ -0.87
COL11A1-202ENST00000358392 YBX2Q9Y2T7 364 aaKnown RBP9.61□□□□□ -0.87
COL11A1-202ENST00000358392 IL9P15248 144 aa9.61□□□□□ -0.87
COL11A1-202ENST00000358392 HBBP68871 147 aa9.61□□□□□ -0.87
COL11A1-202ENST00000358392 CENPVQ7Z7K6 275 aaPredicted RBP9.61□□□□□ -0.87
COL11A1-202ENST00000358392 MMD2Q8IY49 270 aa9.61□□□□□ -0.87
COL11A1-202ENST00000358392 FNDC4Q9H6D8 234 aaPredicted RBP9.61□□□□□ -0.87
COL11A1-202ENST00000358392 FAM19A2Q8N3H0 131 aa9.61□□□□□ -0.87
COL11A1-202ENST00000358392 SPSB4Q96A44 273 aa9.61□□□□□ -0.87
COL11A1-202ENST00000358392 C2orf88Q9BSF0 95 aa9.61□□□□□ -0.87
COL11A1-202ENST00000358392 IDI2-AS1Q9NZ38 188 aa9.61□□□□□ -0.87
COL11A1-202ENST00000358392 DOCK5Q9H7D0 1870 aa9.61□□□□□ -0.87
COL11A1-202ENST00000358392 SNRNP200O75643 2136 aaKnown RBP9.61□□□□□ -0.87
COL11A1-202ENST00000358392 PROB1E7EW31 1015 aa9.61□□□□□ -0.87
COL11A1-202ENST00000358392 CEACAM4O75871 244 aa9.61□□□□□ -0.87
COL11A1-202ENST00000358392 APOHP02749 345 aaPredicted RBP9.61□□□□□ -0.87
COL11A1-202ENST00000358392 RPS20P60866 119 aaKnown RBP9.61□□□□□ -0.87
COL11A1-202ENST00000358392 IFITM3Q01628 133 aa9.61□□□□□ -0.87
COL11A1-202ENST00000358392 LINC00518Q8N0U6 118 aa9.61□□□□□ -0.87
COL11A1-202ENST00000358392 GFI1BQ5VTD9 330 aa9.61□□□□□ -0.87
COL11A1-202ENST00000358392 NPIPB8E9PQR5 432 aa9.6□□□□□ -0.87
COL11A1-202ENST00000358392 NPIPB9F8W1W9 429 aa9.6□□□□□ -0.87
COL11A1-202ENST00000358392 ERVH48-1M5A8F1 160 aa9.6□□□□□ -0.87
COL11A1-202ENST00000358392 NPIPB7O75200 414 aa9.6□□□□□ -0.87
COL11A1-202ENST00000358392 FCARP24071 287 aa9.6□□□□□ -0.87
COL11A1-202ENST00000358392 CKS1BP61024 79 aa9.6□□□□□ -0.87
COL11A1-202ENST00000358392 WDR82Q6UXN9 313 aa9.6□□□□□ -0.87
COL11A1-202ENST00000358392 ZNF721Q8TF20 911 aa9.6□□□□□ -0.87
COL11A1-202ENST00000358392 TNFRSF18Q9Y5U5 241 aa9.6□□□□□ -0.87
COL11A1-202ENST00000358392 TDRD6O60522 2096 aaKnown RBP9.6□□□□□ -0.87
COL11A1-202ENST00000358392 IGHV3OR16-8A0A075B7F1 116 aa9.6□□□□□ -0.87
COL11A1-202ENST00000358392 C17orf51A8MQB3 221 aa9.6□□□□□ -0.87
COL11A1-202ENST00000358392 C8orf88P0DMB2 117 aa9.6□□□□□ -0.87
COL11A1-202ENST00000358392 RNASE4P34096 147 aaKnown RBP9.6□□□□□ -0.87
COL11A1-202ENST00000358392 MPV17P39210 176 aa9.6□□□□□ -0.87
COL11A1-202ENST00000358392 SAMD13Q5VXD3 122 aa9.6□□□□□ -0.87
COL11A1-202ENST00000358392 BTAF1O14981 1849 aa9.6□□□□□ -0.87
COL11A1-202ENST00000358392 OR11H12B2RN74 326 aa9.6□□□□□ -0.87
COL11A1-202ENST00000358392 PF4P02776 101 aa9.6□□□□□ -0.87
COL11A1-202ENST00000358392 FTH1P19P0C7X4 201 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms