RNA–Protein interactions for RNA: ENST00000357654.7

BRCA1-203, Transcript of BRCA1, DNA repair associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRCA1, Length 7,094 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-203ENST00000357654 GGCTO75223 188 aaKnown RBP4.98□□□□□ -1.61
BRCA1-203ENST00000357654 MOSPD3O75425 235 aa4.98□□□□□ -1.61
BRCA1-203ENST00000357654 PPP1R1AQ13522 171 aa4.98□□□□□ -1.61
BRCA1-203ENST00000357654 ACTL10Q5JWF8 245 aa4.98□□□□□ -1.61
BRCA1-203ENST00000357654 IBA57Q5T440 356 aaKnown RBP4.98□□□□□ -1.61
BRCA1-203ENST00000357654 PQLC2Q6ZP29 291 aa4.98□□□□□ -1.61
BRCA1-203ENST00000357654 NKAPP1Q8N9T2 125 aa4.98□□□□□ -1.61
BRCA1-203ENST00000357654 SLC25A2Q9BXI2 301 aa4.98□□□□□ -1.61
BRCA1-203ENST00000357654 RPRMQ9NS64 109 aa4.98□□□□□ -1.61
BRCA1-203ENST00000357654 IGKV6-21A0A0C4DH24 114 aa4.98□□□□□ -1.61
BRCA1-203ENST00000357654 NPIPB4C9JG80 1138 aa4.98□□□□□ -1.61
BRCA1-203ENST00000357654 HOXD4P09016 255 aaPredicted RBP4.98□□□□□ -1.61
BRCA1-203ENST00000357654 TEX37Q96LM6 180 aa4.98□□□□□ -1.61
BRCA1-203ENST00000357654 VWC2LB2RUY7 222 aa4.98□□□□□ -1.61
BRCA1-203ENST00000357654 RAE1P78406 368 aaKnown RBP4.98□□□□□ -1.61
BRCA1-203ENST00000357654 PLPPR5Q32ZL2 321 aa4.98□□□□□ -1.61
BRCA1-203ENST00000357654 C11orf87Q6NUJ2 197 aa4.98□□□□□ -1.61
BRCA1-203ENST00000357654 DEGS2Q6QHC5 323 aa4.98□□□□□ -1.61
BRCA1-203ENST00000357654 ZNF562Q6V9R5 426 aa4.98□□□□□ -1.61
BRCA1-203ENST00000357654 BIVMQ86UB2 503 aa4.98□□□□□ -1.61
BRCA1-203ENST00000357654 HOGA1Q86XE5 327 aa4.98□□□□□ -1.61
BRCA1-203ENST00000357654 MMD2Q8IY49 270 aa4.98□□□□□ -1.61
BRCA1-203ENST00000357654 ARRDC1Q8N5I2 433 aa4.98□□□□□ -1.61
BRCA1-203ENST00000357654 CHKB-CPT1BH3BT56 60 aa4.98□□□□□ -1.61
BRCA1-203ENST00000357654 J3QT63 122 aa4.98□□□□□ -1.61
BRCA1-203ENST00000357654 ZNF561-AS1K7EIQ3 104 aa4.98□□□□□ -1.61
BRCA1-203ENST00000357654 SOCS1O15524 211 aa4.98□□□□□ -1.61
BRCA1-203ENST00000357654 PAPPA-AS1Q5QFB9 102 aa4.98□□□□□ -1.61
BRCA1-203ENST00000357654 ANAPC16Q96DE5 110 aa4.98□□□□□ -1.61
BRCA1-203ENST00000357654 TIMM17AQ99595 171 aa4.98□□□□□ -1.61
BRCA1-203ENST00000357654 PCM1Q15154 2024 aa4.98□□□□□ -1.61
BRCA1-203ENST00000357654 GGTLC3B5MD39 225 aa4.98□□□□□ -1.61
BRCA1-203ENST00000357654 TMEM250H0YL14 139 aa4.98□□□□□ -1.61
BRCA1-203ENST00000357654 COTL1Q14019 142 aa4.98□□□□□ -1.61
BRCA1-203ENST00000357654 ICAM4Q14773 271 aa4.98□□□□□ -1.61
BRCA1-203ENST00000357654 SPATA45Q537H7 98 aa4.98□□□□□ -1.61
BRCA1-203ENST00000357654 ST6GALNAC3Q8NDV1 305 aa4.98□□□□□ -1.61
BRCA1-203ENST00000357654 ARPC1AQ92747 370 aa4.98□□□□□ -1.61
BRCA1-203ENST00000357654 LOC101059948A0A1B0GTJ6 334 aa4.97□□□□□ -1.61
BRCA1-203ENST00000357654 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP4.97□□□□□ -1.61
BRCA1-203ENST00000357654 C9orf170A2RU37 121 aa4.97□□□□□ -1.61
BRCA1-203ENST00000357654 MBD3L4A6NDZ8 208 aaPredicted RBP4.97□□□□□ -1.61
BRCA1-203ENST00000357654 MBD3L3A6NE82 208 aaPredicted RBP4.97□□□□□ -1.61
BRCA1-203ENST00000357654 MBD3L5A6NJ08 208 aaPredicted RBP4.97□□□□□ -1.61
BRCA1-203ENST00000357654 ZG16O60844 167 aa4.97□□□□□ -1.61
BRCA1-203ENST00000357654 GHRHP01286 108 aa4.97□□□□□ -1.61
BRCA1-203ENST00000357654 MBD3L2Q8NHZ7 208 aaPredicted RBP4.97□□□□□ -1.61
BRCA1-203ENST00000357654 PARLQ9H300 379 aa4.97□□□□□ -1.61
BRCA1-203ENST00000357654 FAM60AQ9NP50 221 aa4.97□□□□□ -1.61
BRCA1-203ENST00000357654 NPAP1Q9NZP6 1156 aa4.97□□□□□ -1.61
BRCA1-203ENST00000357654 TNKS1BP1Q9C0C2 1729 aaKnown RBP4.97□□□□□ -1.61
BRCA1-203ENST00000357654 C7orf66A4D0T2 115 aa4.97□□□□□ -1.61
BRCA1-203ENST00000357654 RBFOX3A6NFN3 312 aa4.97□□□□□ -1.61
BRCA1-203ENST00000357654 HPRT1P00492 218 aa4.97□□□□□ -1.61
BRCA1-203ENST00000357654 INSL4Q14641 139 aa4.97□□□□□ -1.61
BRCA1-203ENST00000357654 DEFB105AQ8NG35 78 aa4.97□□□□□ -1.61
BRCA1-203ENST00000357654 NEU4Q8WWR8 484 aaPredicted RBP4.97□□□□□ -1.61
BRCA1-203ENST00000357654 A0A0A6YYD5 115 aa4.97□□□□□ -1.61
BRCA1-203ENST00000357654 OR2H2O95918 312 aa4.97□□□□□ -1.61
BRCA1-203ENST00000357654 IGLV2-23P01705 113 aa4.97□□□□□ -1.61
BRCA1-203ENST00000357654 GLRXP35754 106 aa4.97□□□□□ -1.61
BRCA1-203ENST00000357654 TMEM50BP56557 158 aa4.97□□□□□ -1.61
BRCA1-203ENST00000357654 MEF2BQ02080 365 aaPredicted RBP4.97□□□□□ -1.61
BRCA1-203ENST00000357654 CNRIP1Q96F85 164 aaPredicted RBP4.97□□□□□ -1.61
BRCA1-203ENST00000357654 VCX2Q9H322 139 aa4.97□□□□□ -1.61
BRCA1-203ENST00000357654 ZNF430Q9H8G1 570 aaPredicted RBP4.97□□□□□ -1.61
BRCA1-203ENST00000357654 Q9HAA7 133 aa4.97□□□□□ -1.61
BRCA1-203ENST00000357654 TEX48A0A1B0GUV7 120 aa4.97□□□□□ -1.61
BRCA1-203ENST00000357654 UPK3AO75631 287 aa4.97□□□□□ -1.61
BRCA1-203ENST00000357654 CA1P00915 261 aaPredicted RBP4.97□□□□□ -1.61
BRCA1-203ENST00000357654 CT62P0C5K7 136 aa4.97□□□□□ -1.61
BRCA1-203ENST00000357654 CBLN3Q6UW01 205 aa4.97□□□□□ -1.61
BRCA1-203ENST00000357654 PAQR9Q6ZVX9 377 aa4.97□□□□□ -1.61
BRCA1-203ENST00000357654 NR2C2APQ86WQ0 139 aa4.97□□□□□ -1.61
BRCA1-203ENST00000357654 OR11H7Q8NGC8 314 aa4.97□□□□□ -1.61
BRCA1-203ENST00000357654 PGLYRP3Q96LB9 341 aa4.97□□□□□ -1.61
BRCA1-203ENST00000357654 Q96MF0 132 aa4.97□□□□□ -1.61
BRCA1-203ENST00000357654 NRTNQ99748 197 aa4.97□□□□□ -1.61
BRCA1-203ENST00000357654 DSPPQ9NZW4 1301 aa4.97□□□□□ -1.61
BRCA1-203ENST00000357654 WNK3Q9BYP7 1800 aa4.97□□□□□ -1.61
BRCA1-203ENST00000357654 RNF223E7ERA6 249 aa4.97□□□□□ -1.61
BRCA1-203ENST00000357654 C1QL1O75973 258 aa4.97□□□□□ -1.61
BRCA1-203ENST00000357654 PPIFP30405 207 aaKnown RBP4.97□□□□□ -1.61
BRCA1-203ENST00000357654 MPV17P39210 176 aa4.97□□□□□ -1.61
BRCA1-203ENST00000357654 MIC13Q5XKP0 118 aa4.97□□□□□ -1.61
BRCA1-203ENST00000357654 RCHY1Q96PM5 261 aa4.97□□□□□ -1.61
BRCA1-203ENST00000357654 ZNF385AQ96PM9 386 aaKnown RBP4.97□□□□□ -1.61
BRCA1-203ENST00000357654 GPHA2Q96T91 129 aa4.97□□□□□ -1.61
BRCA1-203ENST00000357654 IGKV6D-21A0A0A0MT36 114 aa4.96□□□□□ -1.61
BRCA1-203ENST00000357654 SMIM13P0DJ93 91 aa4.96□□□□□ -1.61
BRCA1-203ENST00000357654 KIAA1644Q3SXP7 199 aa4.96□□□□□ -1.61
BRCA1-203ENST00000357654 C4orf48Q5BLP8 95 aa4.96□□□□□ -1.61
BRCA1-203ENST00000357654 MESTQ5EB52 335 aa4.96□□□□□ -1.61
BRCA1-203ENST00000357654 FAM209AQ5JX71 171 aa4.96□□□□□ -1.61
BRCA1-203ENST00000357654 LEMD1Q68G75 181 aa4.96□□□□□ -1.61
BRCA1-203ENST00000357654 SP5Q6BEB4 398 aaPredicted RBP4.96□□□□□ -1.61
BRCA1-203ENST00000357654 BRD3OSQ6XYD6 125 aa4.96□□□□□ -1.61
BRCA1-203ENST00000357654 SPNS2Q8IVW8 549 aa4.96□□□□□ -1.61
BRCA1-203ENST00000357654 RNF133Q8WVZ7 376 aa4.96□□□□□ -1.61
BRCA1-203ENST00000357654 ISOC2Q96AB3 205 aa4.96□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms