RNA–Protein interactions for RNA: ENST00000357604.9

UPF2-202, Transcript of UPF2, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPF2, Length 5,193 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2-202ENST00000357604 ZNF257Q9Y2Q1 563 aa7.5□□□□□ -1.21
UPF2-202ENST00000357604 NUPL2O15504 423 aaKnown RBP7.49□□□□□ -1.21
UPF2-202ENST00000357604 OR5AC1P0C628 307 aa7.49□□□□□ -1.21
UPF2-202ENST00000357604 G6PCP35575 357 aa7.49□□□□□ -1.21
UPF2-202ENST00000357604 SPCS3P61009 180 aa7.49□□□□□ -1.21
UPF2-202ENST00000357604 OVCH2Q7RTZ1 564 aa7.49□□□□□ -1.21
UPF2-202ENST00000357604 C2orf50Q96LR7 162 aa7.49□□□□□ -1.21
UPF2-202ENST00000357604 A0A0A6YYD4 124 aa7.49□□□□□ -1.21
UPF2-202ENST00000357604 FAM223BA6NKX1 122 aa7.49□□□□□ -1.21
UPF2-202ENST00000357604 HTR2BP41595 481 aa7.49□□□□□ -1.21
UPF2-202ENST00000357604 BAXQ07812 192 aa7.49□□□□□ -1.21
UPF2-202ENST00000357604 FAM223AQ8IWN6 122 aa7.49□□□□□ -1.21
UPF2-202ENST00000357604 UNKLQ9H9P5 680 aaKnown RBP7.49□□□□□ -1.21
UPF2-202ENST00000357604 GNG7O60262 68 aa7.49□□□□□ -1.21
UPF2-202ENST00000357604 CD33P20138 364 aa7.49□□□□□ -1.21
UPF2-202ENST00000357604 LOXL3P58215 753 aa7.49□□□□□ -1.21
UPF2-202ENST00000357604 RPEL1Q2QD12 228 aa7.49□□□□□ -1.21
UPF2-202ENST00000357604 NSUN5P1Q3KNT7 163 aa7.49□□□□□ -1.21
UPF2-202ENST00000357604 IQCF2Q8IXL9 164 aa7.49□□□□□ -1.21
UPF2-202ENST00000357604 OR5B3Q8NH48 314 aa7.49□□□□□ -1.21
UPF2-202ENST00000357604 P2RX4Q99571 388 aa7.49□□□□□ -1.21
UPF2-202ENST00000357604 GFI1Q99684 422 aa7.49□□□□□ -1.21
UPF2-202ENST00000357604 MIXL1Q9H2W2 232 aa7.49□□□□□ -1.21
UPF2-202ENST00000357604 FXYD6-FXYD2A0A087WZ82 144 aa7.49□□□□□ -1.21
UPF2-202ENST00000357604 TMEM50BP56557 158 aa7.49□□□□□ -1.21
UPF2-202ENST00000357604 RAP2BP61225 183 aa7.49□□□□□ -1.21
UPF2-202ENST00000357604 OR4A47Q6IF82 309 aa7.49□□□□□ -1.21
UPF2-202ENST00000357604 SLC2A8Q9NY64 477 aa7.49□□□□□ -1.21
UPF2-202ENST00000357604 CFDP00746 253 aaPredicted RBP7.48□□□□□ -1.21
UPF2-202ENST00000357604 OR13C7P0DN81 318 aa7.48□□□□□ -1.21
UPF2-202ENST00000357604 IGHV4-38-2P0DP08 117 aa7.48□□□□□ -1.21
UPF2-202ENST00000357604 MFAP4P55083 255 aa7.48□□□□□ -1.21
UPF2-202ENST00000357604 RRAS2P62070 204 aaPredicted RBP7.48□□□□□ -1.21
UPF2-202ENST00000357604 RPL11P62913 178 aaKnown RBP7.48□□□□□ -1.21
UPF2-202ENST00000357604 KLF9Q13886 244 aaPredicted RBP7.48□□□□□ -1.21
UPF2-202ENST00000357604 GGNBP1Q5YKI7 109 aa7.48□□□□□ -1.21
UPF2-202ENST00000357604 Q6YL49 198 aa7.48□□□□□ -1.21
UPF2-202ENST00000357604 Q6ZRG5 221 aa7.48□□□□□ -1.21
UPF2-202ENST00000357604 AKIP1Q9NQ31 210 aa7.48□□□□□ -1.21
UPF2-202ENST00000357604 CACNG5Q9UF02 275 aa7.48□□□□□ -1.21
UPF2-202ENST00000357604 A0A0B4J2A0 478 aa7.48□□□□□ -1.21
UPF2-202ENST00000357604 ZFP92A6NM28 416 aa7.48□□□□□ -1.21
UPF2-202ENST00000357604 FAM90A26D6RGX4 464 aa7.48□□□□□ -1.21
UPF2-202ENST00000357604 H0YJW9 148 aa7.48□□□□□ -1.21
UPF2-202ENST00000357604 H3BUA1 57 aa7.48□□□□□ -1.21
UPF2-202ENST00000357604 KBTBD11O94819 623 aa7.48□□□□□ -1.21
UPF2-202ENST00000357604 YIF1AO95070 293 aa7.48□□□□□ -1.21
UPF2-202ENST00000357604 TMEM255AQ5JRV8 349 aa7.48□□□□□ -1.21
UPF2-202ENST00000357604 DRAXINQ8NBI3 349 aaPredicted RBP7.48□□□□□ -1.21
UPF2-202ENST00000357604 STOML3Q8TAV4 291 aa7.48□□□□□ -1.21
UPF2-202ENST00000357604 TMEM222Q9H0R3 208 aa7.48□□□□□ -1.21
UPF2-202ENST00000357604 FBXL15Q9H469 300 aa7.48□□□□□ -1.21
UPF2-202ENST00000357604 BET1LQ9NYM9 111 aa7.48□□□□□ -1.21
UPF2-202ENST00000357604 SHPKQ9UHJ6 478 aa7.48□□□□□ -1.21
UPF2-202ENST00000357604 KIAA1549Q9HCM3 1950 aa7.48□□□□□ -1.21
UPF2-202ENST00000357604 hCG_2014768A0A024R1R8 64 aa7.48□□□□□ -1.21
UPF2-202ENST00000357604 ATP6V1FQ16864 119 aa7.48□□□□□ -1.21
UPF2-202ENST00000357604 Q8WTZ3 238 aa7.48□□□□□ -1.21
UPF2-202ENST00000357604 USMG5Q96IX5 58 aa7.48□□□□□ -1.21
UPF2-202ENST00000357604 ZNRD1Q9P1U0 126 aa7.48□□□□□ -1.21
UPF2-202ENST00000357604 TBC1D24Q9ULP9 559 aa7.48□□□□□ -1.21
UPF2-202ENST00000357604 DYNLT3P51808 116 aa7.48□□□□□ -1.21
UPF2-202ENST00000357604 CMC4P56277 68 aaPredicted RBP7.48□□□□□ -1.21
UPF2-202ENST00000357604 ZNF841Q6ZN19 808 aa7.48□□□□□ -1.21
UPF2-202ENST00000357604 LDLRAD3Q86YD5 345 aa7.48□□□□□ -1.21
UPF2-202ENST00000357604 PRDM13Q9H4Q3 707 aa7.48□□□□□ -1.21
UPF2-202ENST00000357604 UFC1Q9Y3C8 167 aa7.48□□□□□ -1.21
UPF2-202ENST00000357604 DNASE2O00115 360 aaPredicted RBP7.48□□□□□ -1.21
UPF2-202ENST00000357604 CCNKO75909 580 aa7.48□□□□□ -1.21
UPF2-202ENST00000357604 IFNA1P01562 189 aa7.48□□□□□ -1.21
UPF2-202ENST00000357604 PRH1P02810 166 aa7.48□□□□□ -1.21
UPF2-202ENST00000357604 ID1P41134 155 aa7.48□□□□□ -1.21
UPF2-202ENST00000357604 CCBE1Q6UXH8 406 aaPredicted RBP7.48□□□□□ -1.21
UPF2-202ENST00000357604 ZNF818PQ6ZRF7 136 aa7.48□□□□□ -1.21
UPF2-202ENST00000357604 U3KQ87 197 aa7.48□□□□□ -1.21
UPF2-202ENST00000357604 A0A087X0M5 115 aa7.47□□□□□ -1.21
UPF2-202ENST00000357604 A0A1B0GX30 115 aa7.47□□□□□ -1.21
UPF2-202ENST00000357604 C9orf170A2RU37 121 aa7.47□□□□□ -1.21
UPF2-202ENST00000357604 ZP3P21754 424 aa7.47□□□□□ -1.21
UPF2-202ENST00000357604 PSG5Q15238 335 aa7.47□□□□□ -1.21
UPF2-202ENST00000357604 DUX4L9Q6RFH8 374 aaPredicted RBP7.47□□□□□ -1.21
UPF2-202ENST00000357604 TMEM147Q9BVK8 224 aa7.47□□□□□ -1.21
UPF2-202ENST00000357604 DNAJC9-AS1A6NH13 148 aa7.47□□□□□ -1.21
UPF2-202ENST00000357604 CRYM-AS1A6NIL9 109 aa7.47□□□□□ -1.21
UPF2-202ENST00000357604 E5RGE8 158 aa7.47□□□□□ -1.21
UPF2-202ENST00000357604 RNASEK-C17orf49H0YIS7 233 aa7.47□□□□□ -1.21
UPF2-202ENST00000357604 K7EPK0 472 aa7.47□□□□□ -1.21
UPF2-202ENST00000357604 DUS4LO95620 317 aaKnown RBP7.47□□□□□ -1.21
UPF2-202ENST00000357604 ATF4P18848 351 aaPredicted RBP7.47□□□□□ -1.21
UPF2-202ENST00000357604 OR2B8PP59922 312 aa7.47□□□□□ -1.21
UPF2-202ENST00000357604 HSPE1P61604 102 aaKnown RBP7.47□□□□□ -1.21
UPF2-202ENST00000357604 UBA52P62987 128 aaKnown RBP7.47□□□□□ -1.21
UPF2-202ENST00000357604 HERPUD1Q15011 391 aa7.47□□□□□ -1.21
UPF2-202ENST00000357604 C5orf64Q2M2E5 130 aa7.47□□□□□ -1.21
UPF2-202ENST00000357604 FAM71E2Q8N5Q1 922 aa7.47□□□□□ -1.21
UPF2-202ENST00000357604 BPIFCQ8NFQ6 507 aa7.47□□□□□ -1.21
UPF2-202ENST00000357604 RNF2Q99496 336 aa7.47□□□□□ -1.21
UPF2-202ENST00000357604 NABP2Q9BQ15 211 aa7.47□□□□□ -1.21
UPF2-202ENST00000357604 FGF23Q9GZV9 251 aaPredicted RBP7.47□□□□□ -1.21
UPF2-202ENST00000357604 NSG2Q9Y328 171 aa7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms