RNA–Protein interactions for RNA: ENST00000357207.8

TRAPPC11-202, Transcript of trafficking protein particle complex 11, humanhuman

TSL 1 (best) BASIC

Gene TRAPPC11, Length 4,435 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-202ENST00000357207 ODAMA1E959 279 aa13.34□□□□□ -0.27
TRAPPC11-202ENST00000357207 MPZP25189 248 aa13.34□□□□□ -0.27
TRAPPC11-202ENST00000357207 CRYBB3P26998 211 aa13.34□□□□□ -0.27
TRAPPC11-202ENST00000357207 SFRP2Q96HF1 295 aa13.34□□□□□ -0.27
TRAPPC11-202ENST00000357207 HOXB1P14653 301 aaPredicted RBP13.33□□□□□ -0.27
TRAPPC11-202ENST00000357207 RPL13AP40429 203 aaKnown RBP13.33□□□□□ -0.27
TRAPPC11-202ENST00000357207 FXYD3Q14802 87 aa13.33□□□□□ -0.27
TRAPPC11-202ENST00000357207 TCF19Q9Y242 345 aa13.33□□□□□ -0.27
TRAPPC11-202ENST00000357207 UFC1Q9Y3C8 167 aa13.33□□□□□ -0.27
TRAPPC11-202ENST00000357207 TMSB15BA0A087X1C1 80 aa13.33□□□□□ -0.28
TRAPPC11-202ENST00000357207 PPIHO43447 177 aaKnown RBP13.33□□□□□ -0.28
TRAPPC11-202ENST00000357207 APELAP0DMC3 54 aa13.33□□□□□ -0.28
TRAPPC11-202ENST00000357207 PCOLCEQ15113 449 aa13.33□□□□□ -0.28
TRAPPC11-202ENST00000357207 LRRC75BQ2VPJ9 315 aa13.33□□□□□ -0.28
TRAPPC11-202ENST00000357207 FAM214BQ7L5A3 538 aa13.33□□□□□ -0.28
TRAPPC11-202ENST00000357207 ABHD12Q8N2K0 398 aa13.33□□□□□ -0.28
TRAPPC11-202ENST00000357207 TMEM140Q9NV12 185 aa13.33□□□□□ -0.28
TRAPPC11-202ENST00000357207 EP300Q09472 2414 aaPredicted RBP13.33□□□□□ -0.28
TRAPPC11-202ENST00000357207 C12orf54Q6X4T0 127 aa13.33□□□□□ -0.28
TRAPPC11-202ENST00000357207 C1orf174Q8IYL3 243 aa13.33□□□□□ -0.28
TRAPPC11-202ENST00000357207 CDC42EP3Q9UKI2 254 aa13.33□□□□□ -0.28
TRAPPC11-202ENST00000357207 A0A0G2JMZ2 1700 aa13.33□□□□□ -0.28
TRAPPC11-202ENST00000357207 LRRC37A2A6NM11 1700 aa13.33□□□□□ -0.28
TRAPPC11-202ENST00000357207 hCG_38984A0A1B0GV85 526 aa13.33□□□□□ -0.28
TRAPPC11-202ENST00000357207 M0R296 226 aa13.33□□□□□ -0.28
TRAPPC11-202ENST00000357207 LEPROTL1O95214 131 aa13.33□□□□□ -0.28
TRAPPC11-202ENST00000357207 C8orf88P0DMB2 117 aa13.33□□□□□ -0.28
TRAPPC11-202ENST00000357207 LYRM7Q5U5X0 104 aa13.33□□□□□ -0.28
TRAPPC11-202ENST00000357207 CALHM1Q8IU99 346 aa13.33□□□□□ -0.28
TRAPPC11-202ENST00000357207 SLC25A33Q9BSK2 321 aa13.33□□□□□ -0.28
TRAPPC11-202ENST00000357207 SDF2L1Q9HCN8 221 aa13.33□□□□□ -0.28
TRAPPC11-202ENST00000357207 ANK1P16157 1881 aa13.33□□□□□ -0.28
TRAPPC11-202ENST00000357207 PSME4Q14997 1843 aa13.32□□□□□ -0.28
TRAPPC11-202ENST00000357207 A0A1W2PR77 199 aa13.32□□□□□ -0.28
TRAPPC11-202ENST00000357207 F5H697 171 aa13.32□□□□□ -0.28
TRAPPC11-202ENST00000357207 OR4A8P0C604 315 aa13.32□□□□□ -0.28
TRAPPC11-202ENST00000357207 CBLN1P23435 193 aa13.32□□□□□ -0.28
TRAPPC11-202ENST00000357207 ZNF600Q6ZNG1 722 aa13.32□□□□□ -0.28
TRAPPC11-202ENST00000357207 CLDND2Q8NHS1 167 aa13.32□□□□□ -0.28
TRAPPC11-202ENST00000357207 MAFAQ8NHW3 353 aaPredicted RBP13.32□□□□□ -0.28
TRAPPC11-202ENST00000357207 DOCK6Q96HP0 2047 aa13.32□□□□□ -0.28
TRAPPC11-202ENST00000357207 PGPA6NDG6 321 aa13.32□□□□□ -0.28
TRAPPC11-202ENST00000357207 ZIC3O60481 467 aa13.32□□□□□ -0.28
TRAPPC11-202ENST00000357207 NPIPB7O75200 414 aa13.32□□□□□ -0.28
TRAPPC11-202ENST00000357207 RHBDL1O75783 438 aa13.32□□□□□ -0.28
TRAPPC11-202ENST00000357207 RELBQ01201 579 aa13.32□□□□□ -0.28
TRAPPC11-202ENST00000357207 GBGT1Q8N5D6 347 aa13.32□□□□□ -0.28
TRAPPC11-202ENST00000357207 SNRNP40Q96DI7 357 aaKnown RBP13.32□□□□□ -0.28
TRAPPC11-202ENST00000357207 OR4A47Q6IF82 309 aa13.32□□□□□ -0.28
TRAPPC11-202ENST00000357207 MRPL13Q9BYD1 178 aaKnown RBP13.32□□□□□ -0.28
TRAPPC11-202ENST00000357207 IGHV3-21A0A0B4J1V1 117 aa13.31□□□□□ -0.28
TRAPPC11-202ENST00000357207 PLAUP00749 431 aa13.31□□□□□ -0.28
TRAPPC11-202ENST00000357207 GCSAMQ8N6F7 178 aa13.31□□□□□ -0.28
TRAPPC11-202ENST00000357207 TNS1Q9HBL0 1735 aaKnown RBP13.31□□□□□ -0.28
TRAPPC11-202ENST00000357207 IGKV1-9A0A0C4DH69 117 aa13.31□□□□□ -0.28
TRAPPC11-202ENST00000357207 A0A1W2PQM1 296 aa13.31□□□□□ -0.28
TRAPPC11-202ENST00000357207 ZNF207O43670 478 aaKnown RBP13.31□□□□□ -0.28
TRAPPC11-202ENST00000357207 PRNTQ86SH4 94 aa13.31□□□□□ -0.28
TRAPPC11-202ENST00000357207 DOLPP1Q86YN1 238 aa13.31□□□□□ -0.28
TRAPPC11-202ENST00000357207 A0A1W2PRD5 423 aa13.31□□□□□ -0.28
TRAPPC11-202ENST00000357207 A0A1W2PRF3 423 aa13.31□□□□□ -0.28
TRAPPC11-202ENST00000357207 A0A1W2PRM7 423 aa13.31□□□□□ -0.28
TRAPPC11-202ENST00000357207 NUBP1P53384 320 aa13.31□□□□□ -0.28
TRAPPC11-202ENST00000357207 RPL30P62888 115 aaKnown RBP13.31□□□□□ -0.28
TRAPPC11-202ENST00000357207 FAM89BQ8N5H3 189 aa13.31□□□□□ -0.28
TRAPPC11-202ENST00000357207 RAB1CQ92928 201 aa13.31□□□□□ -0.28
TRAPPC11-202ENST00000357207 COL25A1Q9BXS0 654 aaPredicted RBP13.31□□□□□ -0.28
TRAPPC11-202ENST00000357207 ZFP30Q9Y2G7 519 aa13.31□□□□□ -0.28
TRAPPC11-202ENST00000357207 MPDZO75970 2070 aa13.31□□□□□ -0.28
TRAPPC11-202ENST00000357207 TRBV9A0A0B4J1U6 114 aa13.31□□□□□ -0.28
TRAPPC11-202ENST00000357207 UBE2CO00762 179 aa13.31□□□□□ -0.28
TRAPPC11-202ENST00000357207 TIAF1O95411 115 aa13.31□□□□□ -0.28
TRAPPC11-202ENST00000357207 PTGDSP41222 190 aa13.31□□□□□ -0.28
TRAPPC11-202ENST00000357207 RPL8P62917 257 aaKnown RBP13.31□□□□□ -0.28
TRAPPC11-202ENST00000357207 RTP5Q14D33 572 aa13.31□□□□□ -0.28
TRAPPC11-202ENST00000357207 TRIP6Q15654 476 aaKnown RBP13.31□□□□□ -0.28
TRAPPC11-202ENST00000357207 SCGB1D4Q6XE38 83 aa13.31□□□□□ -0.28
TRAPPC11-202ENST00000357207 CCL13Q99616 98 aa13.31□□□□□ -0.28
TRAPPC11-202ENST00000357207 DNAJC4Q9NNZ3 241 aa13.31□□□□□ -0.28
TRAPPC11-202ENST00000357207 HIGD1AQ9Y241 93 aa13.31□□□□□ -0.28
TRAPPC11-202ENST00000357207 GBF1Q92538 1859 aa13.3□□□□□ -0.28
TRAPPC11-202ENST00000357207 COLCA2A8K830 154 aa13.3□□□□□ -0.28
TRAPPC11-202ENST00000357207 COX6A1P12074 109 aa13.3□□□□□ -0.28
TRAPPC11-202ENST00000357207 RPL27AP46776 148 aaKnown RBP13.3□□□□□ -0.28
TRAPPC11-202ENST00000357207 SPEM2Q0P670 501 aa13.3□□□□□ -0.28
TRAPPC11-202ENST00000357207 CLEC5AQ9NY25 188 aa13.3□□□□□ -0.28
TRAPPC11-202ENST00000357207 GCHFRP30047 84 aa13.3□□□□□ -0.28
TRAPPC11-202ENST00000357207 HERPUD1Q15011 391 aa13.3□□□□□ -0.28
TRAPPC11-202ENST00000357207 KHDC1LQ5JSQ8 128 aa13.3□□□□□ -0.28
TRAPPC11-202ENST00000357207 ATG101Q9BSB4 218 aa13.3□□□□□ -0.28
TRAPPC11-202ENST00000357207 SLC25A10Q9UBX3 287 aaPredicted RBP13.3□□□□□ -0.28
TRAPPC11-202ENST00000357207 SYNGR3O43761 229 aa13.3□□□□□ -0.28
TRAPPC11-202ENST00000357207 AMY1AP04745 511 aa13.3□□□□□ -0.28
TRAPPC11-202ENST00000357207 CD5P06127 495 aa13.3□□□□□ -0.28
TRAPPC11-202ENST00000357207 SSTR5P35346 364 aa13.3□□□□□ -0.28
TRAPPC11-202ENST00000357207 TAS2R60P59551 318 aa13.3□□□□□ -0.28
TRAPPC11-202ENST00000357207 CCL8P80075 99 aa13.3□□□□□ -0.28
TRAPPC11-202ENST00000357207 PMS2CLQ68D20 193 aa13.3□□□□□ -0.28
TRAPPC11-202ENST00000357207 SLC35E4Q6ICL7 350 aa13.3□□□□□ -0.28
TRAPPC11-202ENST00000357207 SFXN3Q9BWM7 321 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms