RNA–Protein interactions for RNA: ENST00000356435.9

PTPRD-202, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRD, Length 9,472 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-202ENST00000356435 PRELID3AQ96N28 172 aa4.77□□□□□ -1.65
PTPRD-202ENST00000356435 DPH3P1Q9H4G8 78 aa4.77□□□□□ -1.65
PTPRD-202ENST00000356435 TAF1P21675 1872 aa4.77□□□□□ -1.65
PTPRD-202ENST00000356435 ODAMA1E959 279 aa4.76□□□□□ -1.65
PTPRD-202ENST00000356435 VSIG8P0DPA2 414 aa4.76□□□□□ -1.65
PTPRD-202ENST00000356435 INSL4Q14641 139 aa4.76□□□□□ -1.65
PTPRD-202ENST00000356435 C1orf162Q8NEQ5 155 aaPredicted RBP4.76□□□□□ -1.65
PTPRD-202ENST00000356435 ADAT3Q96EY9 351 aaPredicted RBP4.76□□□□□ -1.65
PTPRD-202ENST00000356435 C2orf88Q9BSF0 95 aa4.76□□□□□ -1.65
PTPRD-202ENST00000356435 TNFRSF18Q9Y5U5 241 aa4.76□□□□□ -1.65
PTPRD-202ENST00000356435 A0A0J9YW62 118 aa4.76□□□□□ -1.65
PTPRD-202ENST00000356435 ASIPP42127 132 aa4.76□□□□□ -1.65
PTPRD-202ENST00000356435 ARF6P62330 175 aa4.76□□□□□ -1.65
PTPRD-202ENST00000356435 PRR13Q9NZ81 148 aa4.76□□□□□ -1.65
PTPRD-202ENST00000356435 CRPP02741 224 aa4.76□□□□□ -1.65
PTPRD-202ENST00000356435 FAM3BP58499 235 aaPredicted RBP4.76□□□□□ -1.65
PTPRD-202ENST00000356435 PCOLCEQ15113 449 aa4.76□□□□□ -1.65
PTPRD-202ENST00000356435 ZNF660Q6AZW8 331 aaPredicted RBP4.76□□□□□ -1.65
PTPRD-202ENST00000356435 GTSCR1Q86UQ5 136 aa4.76□□□□□ -1.65
PTPRD-202ENST00000356435 MRPL32Q9BYC8 188 aaKnown RBP4.76□□□□□ -1.65
PTPRD-202ENST00000356435 FUT9Q9Y231 359 aa4.76□□□□□ -1.65
PTPRD-202ENST00000356435 THSD7AQ9UPZ6 1657 aa4.76□□□□□ -1.65
PTPRD-202ENST00000356435 FOXS1O43638 330 aa4.76□□□□□ -1.65
PTPRD-202ENST00000356435 GCSAMLQ5JQS6 135 aa4.76□□□□□ -1.65
PTPRD-202ENST00000356435 TMEM222Q9H0R3 208 aa4.76□□□□□ -1.65
PTPRD-202ENST00000356435 FER1L6Q2WGJ9 1857 aa4.76□□□□□ -1.65
PTPRD-202ENST00000356435 GDF9O60383 454 aa4.76□□□□□ -1.65
PTPRD-202ENST00000356435 CD8AP01732 235 aa4.76□□□□□ -1.65
PTPRD-202ENST00000356435 IBA57Q5T440 356 aaKnown RBP4.76□□□□□ -1.65
PTPRD-202ENST00000356435 DNM1P46Q6ZS02 220 aa4.76□□□□□ -1.65
PTPRD-202ENST00000356435 SAXO1Q8IYX7 474 aa4.76□□□□□ -1.65
PTPRD-202ENST00000356435 SGMS2Q8NHU3 365 aa4.76□□□□□ -1.65
PTPRD-202ENST00000356435 LRRC3BQ96PB8 259 aa4.76□□□□□ -1.65
PTPRD-202ENST00000356435 FOXJ2Q9P0K8 574 aa4.76□□□□□ -1.65
PTPRD-202ENST00000356435 TNFSF18Q9UNG2 199 aa4.76□□□□□ -1.65
PTPRD-202ENST00000356435 ISG15P05161 165 aa4.76□□□□□ -1.65
PTPRD-202ENST00000356435 ZNF883P0CG24 379 aa4.76□□□□□ -1.65
PTPRD-202ENST00000356435 COX5BP10606 129 aa4.76□□□□□ -1.65
PTPRD-202ENST00000356435 FABP2P12104 132 aa4.76□□□□□ -1.65
PTPRD-202ENST00000356435 MALP21145 153 aa4.76□□□□□ -1.65
PTPRD-202ENST00000356435 SUCLG1P53597 346 aaKnown RBP4.76□□□□□ -1.65
PTPRD-202ENST00000356435 TMEM177Q53S58 311 aa4.76□□□□□ -1.65
PTPRD-202ENST00000356435 LYZL2Q7Z4W2 148 aa4.76□□□□□ -1.65
PTPRD-202ENST00000356435 DTX2Q86UW9 622 aa4.76□□□□□ -1.65
PTPRD-202ENST00000356435 H1FOOQ8IZA3 346 aaPredicted RBP4.76□□□□□ -1.65
PTPRD-202ENST00000356435 FAM24BQ8N5W8 94 aa4.76□□□□□ -1.65
PTPRD-202ENST00000356435 OR13C6PQ8NH95 151 aa4.76□□□□□ -1.65
PTPRD-202ENST00000356435 RTN4RQ9BZR6 473 aa4.76□□□□□ -1.65
PTPRD-202ENST00000356435 RBKSQ9H477 322 aa4.76□□□□□ -1.65
PTPRD-202ENST00000356435 A0A1W2PRX2 142 aa4.76□□□□□ -1.65
PTPRD-202ENST00000356435 PSMB11A5LHX3 300 aa4.76□□□□□ -1.65
PTPRD-202ENST00000356435 NTN1O95631 604 aa4.76□□□□□ -1.65
PTPRD-202ENST00000356435 GHRHP01286 108 aa4.76□□□□□ -1.65
PTPRD-202ENST00000356435 IFI6P09912 130 aa4.76□□□□□ -1.65
PTPRD-202ENST00000356435 CEACAM1P13688 526 aa4.76□□□□□ -1.65
PTPRD-202ENST00000356435 FSTP19883 344 aa4.76□□□□□ -1.65
PTPRD-202ENST00000356435 NRN1LQ496H8 165 aa4.76□□□□□ -1.65
PTPRD-202ENST00000356435 TMEM70Q9BUB7 260 aa4.76□□□□□ -1.65
PTPRD-202ENST00000356435 COL25A1Q9BXS0 654 aaPredicted RBP4.76□□□□□ -1.65
PTPRD-202ENST00000356435 HLA-DQA1P01909 254 aa4.76□□□□□ -1.65
PTPRD-202ENST00000356435 CELA2AP08217 269 aa4.76□□□□□ -1.65
PTPRD-202ENST00000356435 PAX1P15863 534 aa4.76□□□□□ -1.65
PTPRD-202ENST00000356435 LEPP41159 167 aa4.76□□□□□ -1.65
PTPRD-202ENST00000356435 SNRPEP62304 92 aaKnown RBP4.76□□□□□ -1.65
PTPRD-202ENST00000356435 SERF2P84101 59 aa4.76□□□□□ -1.65
PTPRD-202ENST00000356435 GPR61Q9BZJ8 451 aa4.76□□□□□ -1.65
PTPRD-202ENST00000356435 OR4C45A6NMZ5 311 aa4.75□□□□□ -1.65
PTPRD-202ENST00000356435 RPLP1P05386 114 aaKnown RBP4.75□□□□□ -1.65
PTPRD-202ENST00000356435 LCN2P80188 198 aa4.75□□□□□ -1.65
PTPRD-202ENST00000356435 TPRX1Q8N7U7 411 aa4.75□□□□□ -1.65
PTPRD-202ENST00000356435 NRIP2Q9BQI9 281 aa4.75□□□□□ -1.65
PTPRD-202ENST00000356435 C19orf24Q9BVV8 132 aa4.75□□□□□ -1.65
PTPRD-202ENST00000356435 DMRT1Q9Y5R6 373 aa4.75□□□□□ -1.65
PTPRD-202ENST00000356435 HTN3P15516 51 aa4.75□□□□□ -1.65
PTPRD-202ENST00000356435 MFAP2P55001 183 aa4.75□□□□□ -1.65
PTPRD-202ENST00000356435 FAM209BQ5JX69 171 aa4.75□□□□□ -1.65
PTPRD-202ENST00000356435 PQLC2Q6ZP29 291 aa4.75□□□□□ -1.65
PTPRD-202ENST00000356435 SLC22A18ASQ8N1D0 253 aa4.75□□□□□ -1.65
PTPRD-202ENST00000356435 MRPL13Q9BYD1 178 aaKnown RBP4.75□□□□□ -1.65
PTPRD-202ENST00000356435 PEBP1P30086 187 aaKnown RBP4.75□□□□□ -1.65
PTPRD-202ENST00000356435 ZNF146Q15072 292 aa4.75□□□□□ -1.65
PTPRD-202ENST00000356435 ADAD2Q8NCV1 583 aaKnown RBP4.75□□□□□ -1.65
PTPRD-202ENST00000356435 KLF14Q8TD94 323 aaPredicted RBP4.75□□□□□ -1.65
PTPRD-202ENST00000356435 HIST1H4GQ99525 98 aa4.75□□□□□ -1.65
PTPRD-202ENST00000356435 SMDT1Q9H4I9 107 aa4.75□□□□□ -1.65
PTPRD-202ENST00000356435 SDF2L1Q9HCN8 221 aa4.75□□□□□ -1.65
PTPRD-202ENST00000356435 METRNQ9UJH8 293 aa4.75□□□□□ -1.65
PTPRD-202ENST00000356435 NRXN2Q9P2S2 1712 aa4.75□□□□□ -1.65
PTPRD-202ENST00000356435 A0A1W2PPV9 198 aa4.75□□□□□ -1.65
PTPRD-202ENST00000356435 RBMY1BA6NDE4 496 aaKnown RBP4.75□□□□□ -1.65
PTPRD-202ENST00000356435 RBMY1EA6NEQ0 496 aaKnown RBP4.75□□□□□ -1.65
PTPRD-202ENST00000356435 DIRC3C9JPN6 131 aa4.75□□□□□ -1.65
PTPRD-202ENST00000356435 H3BQ15 152 aa4.75□□□□□ -1.65
PTPRD-202ENST00000356435 RBMY1DP0C7P1 496 aaKnown RBP4.75□□□□□ -1.65
PTPRD-202ENST00000356435 RBMY1A1P0DJD3 496 aaKnown RBP4.75□□□□□ -1.65
PTPRD-202ENST00000356435 RBMY1CP0DJD4 496 aa4.75□□□□□ -1.65
PTPRD-202ENST00000356435 MYOD1P15172 320 aa4.75□□□□□ -1.65
PTPRD-202ENST00000356435 MUC1P15941 1255 aaPredicted RBP4.75□□□□□ -1.65
PTPRD-202ENST00000356435 CXCL2P19875 107 aa4.75□□□□□ -1.65
PTPRD-202ENST00000356435 ZP1P60852 638 aa4.75□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms