RNA–Protein interactions for RNA: ENST00000355086.7

SRGAP1-201, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRGAP1, Length 23,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-201ENST00000355086 A0A1B0GUL6 1792 aa4.99□□□□□ -1.61
SRGAP1-201ENST00000355086 IGHV3OR16-10A0A075B7F0 116 aa4.99□□□□□ -1.61
SRGAP1-201ENST00000355086 RBMY1BA6NDE4 496 aaKnown RBP4.99□□□□□ -1.61
SRGAP1-201ENST00000355086 RBMY1EA6NEQ0 496 aaKnown RBP4.99□□□□□ -1.61
SRGAP1-201ENST00000355086 RBMY1DP0C7P1 496 aaKnown RBP4.99□□□□□ -1.61
SRGAP1-201ENST00000355086 RBMY1A1P0DJD3 496 aaKnown RBP4.99□□□□□ -1.61
SRGAP1-201ENST00000355086 RBMY1CP0DJD4 496 aa4.99□□□□□ -1.61
SRGAP1-201ENST00000355086 FGF5P12034 268 aa4.99□□□□□ -1.61
SRGAP1-201ENST00000355086 RND2P52198 227 aa4.99□□□□□ -1.61
SRGAP1-201ENST00000355086 GOLT1AQ6ZVE7 132 aa4.99□□□□□ -1.61
SRGAP1-201ENST00000355086 A0A0U1RQV5 110 aa4.99□□□□□ -1.61
SRGAP1-201ENST00000355086 CD1AP06126 327 aa4.99□□□□□ -1.61
SRGAP1-201ENST00000355086 DSPPQ9NZW4 1301 aa4.99□□□□□ -1.61
SRGAP1-201ENST00000355086 TRAV21A0A0B4J279 112 aa4.99□□□□□ -1.61
SRGAP1-201ENST00000355086 MEF2CQ06413 473 aaPredicted RBP4.99□□□□□ -1.61
SRGAP1-201ENST00000355086 P2RY6Q15077 328 aa4.99□□□□□ -1.61
SRGAP1-201ENST00000355086 ITLN2Q8WWU7 325 aaPredicted RBP4.99□□□□□ -1.61
SRGAP1-201ENST00000355086 WDR34Q96EX3 536 aa4.99□□□□□ -1.61
SRGAP1-201ENST00000355086 ZNF385AQ96PM9 386 aaKnown RBP4.99□□□□□ -1.61
SRGAP1-201ENST00000355086 TNFSF18Q9UNG2 199 aa4.99□□□□□ -1.61
SRGAP1-201ENST00000355086 PLCE1Q9P212 2302 aa4.99□□□□□ -1.61
SRGAP1-201ENST00000355086 OR11H7Q8NGC8 314 aa4.99□□□□□ -1.61
SRGAP1-201ENST00000355086 H3BRM9 83 aa4.99□□□□□ -1.61
SRGAP1-201ENST00000355086 HRKO00198 91 aa4.99□□□□□ -1.61
SRGAP1-201ENST00000355086 GHRHP01286 108 aa4.99□□□□□ -1.61
SRGAP1-201ENST00000355086 CFAP161Q6P656 301 aa4.99□□□□□ -1.61
SRGAP1-201ENST00000355086 FGFRL1Q8N441 504 aa4.99□□□□□ -1.61
SRGAP1-201ENST00000355086 KIR3DL3Q8N743 410 aa4.99□□□□□ -1.61
SRGAP1-201ENST00000355086 NPFFR1Q9GZQ6 430 aa4.99□□□□□ -1.61
SRGAP1-201ENST00000355086 RUNX1Q01196 453 aa4.99□□□□□ -1.61
SRGAP1-201ENST00000355086 KIAA0040Q15053 153 aa4.99□□□□□ -1.61
SRGAP1-201ENST00000355086 MIC13Q5XKP0 118 aa4.99□□□□□ -1.61
SRGAP1-201ENST00000355086 NXT2Q9NPJ8 142 aaKnown RBP4.99□□□□□ -1.61
SRGAP1-201ENST00000355086 PRR33A8MZF0 331 aa4.99□□□□□ -1.61
SRGAP1-201ENST00000355086 CTSSP25774 331 aa4.99□□□□□ -1.61
SRGAP1-201ENST00000355086 CLDND2Q8NHS1 167 aa4.99□□□□□ -1.61
SRGAP1-201ENST00000355086 VGLL1Q99990 258 aa4.99□□□□□ -1.61
SRGAP1-201ENST00000355086 NPIPB11E5RHQ5 1161 aa4.99□□□□□ -1.61
SRGAP1-201ENST00000355086 TRGC2P03986 189 aa4.99□□□□□ -1.61
SRGAP1-201ENST00000355086 ZNF414Q96IQ9 312 aa4.99□□□□□ -1.61
SRGAP1-201ENST00000355086 MRPS18BQ9Y676 258 aaKnown RBP4.99□□□□□ -1.61
SRGAP1-201ENST00000355086 OR51M1Q9H341 326 aa4.99□□□□□ -1.61
SRGAP1-201ENST00000355086 CALYQ9NYX4 217 aa4.99□□□□□ -1.61
SRGAP1-201ENST00000355086 ZNF688P0C7X2 276 aa4.99□□□□□ -1.61
SRGAP1-201ENST00000355086 NPPCP23582 126 aa4.99□□□□□ -1.61
SRGAP1-201ENST00000355086 AICDAQ9GZX7 198 aa4.99□□□□□ -1.61
SRGAP1-201ENST00000355086 KLK13Q9UKR3 277 aa4.99□□□□□ -1.61
SRGAP1-201ENST00000355086 TAF1P21675 1872 aa4.99□□□□□ -1.61
SRGAP1-201ENST00000355086 C7orf66A4D0T2 115 aa4.99□□□□□ -1.61
SRGAP1-201ENST00000355086 FOXH1O75593 365 aa4.99□□□□□ -1.61
SRGAP1-201ENST00000355086 SOD3P08294 240 aa4.99□□□□□ -1.61
SRGAP1-201ENST00000355086 MUC1P15941 1255 aaPredicted RBP4.99□□□□□ -1.61
SRGAP1-201ENST00000355086 ABHD12Q8N2K0 398 aa4.99□□□□□ -1.61
SRGAP1-201ENST00000355086 HMGCLL1Q8TB92 370 aa4.99□□□□□ -1.61
SRGAP1-201ENST00000355086 CHD5Q8TDI0 1954 aa4.99□□□□□ -1.61
SRGAP1-201ENST00000355086 A1L4Q6 167 aa4.99□□□□□ -1.61
SRGAP1-201ENST00000355086 ZIC1Q15915 447 aa4.99□□□□□ -1.61
SRGAP1-201ENST00000355086 OR10S1Q8NGN2 331 aa4.99□□□□□ -1.61
SRGAP1-201ENST00000355086 DUX3Q96PT4 197 aa4.99□□□□□ -1.61
SRGAP1-201ENST00000355086 TXNDC17Q9BRA2 123 aa4.99□□□□□ -1.61
SRGAP1-201ENST00000355086 M0R381 172 aa4.99□□□□□ -1.61
SRGAP1-201ENST00000355086 C8orf88P0DMB2 117 aa4.99□□□□□ -1.61
SRGAP1-201ENST00000355086 VSIG8P0DPA2 414 aa4.99□□□□□ -1.61
SRGAP1-201ENST00000355086 FAM214BQ7L5A3 538 aa4.99□□□□□ -1.61
SRGAP1-201ENST00000355086 IGHV3-35A0A0C4DH35 117 aa4.98□□□□□ -1.61
SRGAP1-201ENST00000355086 FOXI3A8MTJ6 420 aaPredicted RBP4.98□□□□□ -1.61
SRGAP1-201ENST00000355086 UPK3AO75631 287 aa4.98□□□□□ -1.61
SRGAP1-201ENST00000355086 SRIP30626 198 aa4.98□□□□□ -1.61
SRGAP1-201ENST00000355086 TAF15Q92804 592 aaKnown RBP eCLIP4.98□□□□□ -1.61
SRGAP1-201ENST00000355086 LEAP2Q969E1 77 aa4.98□□□□□ -1.61
SRGAP1-201ENST00000355086 IGHV3-66A0A0C4DH42 116 aa4.98□□□□□ -1.61
SRGAP1-201ENST00000355086 TRGV3P03979 118 aa4.98□□□□□ -1.61
SRGAP1-201ENST00000355086 WDR82Q6UXN9 313 aa4.98□□□□□ -1.61
SRGAP1-201ENST00000355086 ERGP11308 486 aa4.98□□□□□ -1.61
SRGAP1-201ENST00000355086 MS4A3Q96HJ5 214 aa4.98□□□□□ -1.61
SRGAP1-201ENST00000355086 RHOVQ96L33 236 aa4.98□□□□□ -1.61
SRGAP1-201ENST00000355086 ST6GALNAC2Q9UJ37 374 aa4.98□□□□□ -1.61
SRGAP1-201ENST00000355086 RRHO14718 337 aa4.98□□□□□ -1.61
SRGAP1-201ENST00000355086 OR2H2O95918 312 aa4.98□□□□□ -1.61
SRGAP1-201ENST00000355086 ZNF385CQ66K41 422 aaPredicted RBP4.98□□□□□ -1.61
SRGAP1-201ENST00000355086 WDR54Q9H977 334 aa4.98□□□□□ -1.61
SRGAP1-201ENST00000355086 WBP1LQ9NX94 342 aa4.98□□□□□ -1.61
SRGAP1-201ENST00000355086 TRAV8-6A0A0B4J262 113 aa4.98□□□□□ -1.61
SRGAP1-201ENST00000355086 HSPB1P04792 205 aaKnown RBP4.98□□□□□ -1.61
SRGAP1-201ENST00000355086 C10orf111Q8N326 155 aa4.98□□□□□ -1.61
SRGAP1-201ENST00000355086 C9orf62Q8N4C0 152 aa4.98□□□□□ -1.61
SRGAP1-201ENST00000355086 LIPFP07098 398 aa4.98□□□□□ -1.61
SRGAP1-201ENST00000355086 ODAMA1E959 279 aa4.98□□□□□ -1.61
SRGAP1-201ENST00000355086 OR4C45A6NMZ5 311 aa4.98□□□□□ -1.61
SRGAP1-201ENST00000355086 PSG4Q00888 419 aa4.98□□□□□ -1.61
SRGAP1-201ENST00000355086 MEF2BQ02080 365 aaPredicted RBP4.98□□□□□ -1.61
SRGAP1-201ENST00000355086 LINC01587Q99440 93 aa4.98□□□□□ -1.61
SRGAP1-201ENST00000355086 MMP16P51512 607 aa4.98□□□□□ -1.61
SRGAP1-201ENST00000355086 TOPAZ1Q8N9V7 1692 aa4.98□□□□□ -1.61
SRGAP1-201ENST00000355086 DOCK11Q5JSL3 2073 aa4.98□□□□□ -1.61
SRGAP1-201ENST00000355086 NAT1P18440 290 aa4.98□□□□□ -1.61
SRGAP1-201ENST00000355086 STPG1Q5TH74 334 aa4.98□□□□□ -1.61
SRGAP1-201ENST00000355086 MSRB3Q8IXL7 192 aa4.98□□□□□ -1.61
SRGAP1-201ENST00000355086 ATOH7Q8N100 152 aa4.98□□□□□ -1.61
SRGAP1-201ENST00000355086 SAA1P0DJI8 122 aaPredicted RBP4.98□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms