RNA–Protein interactions for RNA: ENST00000354901.8

SMG6-202, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 1 (best) BASIC

Gene SMG6, Length 3,473 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-202ENST00000354901 PLPPR1Q8TBJ4 325 aa7.95□□□□□ -1.14
SMG6-202ENST00000354901 SF3B5Q9BWJ5 86 aaKnown RBP7.95□□□□□ -1.14
SMG6-202ENST00000354901 PRRG4Q9BZD6 226 aa7.95□□□□□ -1.14
SMG6-202ENST00000354901 SH2D2AQ9NP31 389 aa7.95□□□□□ -1.14
SMG6-202ENST00000354901 TMEM242Q9NWH2 141 aa7.95□□□□□ -1.14
SMG6-202ENST00000354901 KIAA1549Q9HCM3 1950 aa7.94□□□□□ -1.14
SMG6-202ENST00000354901 DUXBA0A1W2PPF3 345 aa7.94□□□□□ -1.14
SMG6-202ENST00000354901 HS3ST1O14792 307 aa7.94□□□□□ -1.14
SMG6-202ENST00000354901 PAGE4O60829 102 aa7.94□□□□□ -1.14
SMG6-202ENST00000354901 NGFP01138 241 aa7.94□□□□□ -1.14
SMG6-202ENST00000354901 PSMB3P49720 205 aa7.94□□□□□ -1.14
SMG6-202ENST00000354901 PDLIM4P50479 330 aa7.94□□□□□ -1.14
SMG6-202ENST00000354901 MEF2BQ02080 365 aaPredicted RBP7.94□□□□□ -1.14
SMG6-202ENST00000354901 ZNF726P1Q15940 193 aa7.94□□□□□ -1.14
SMG6-202ENST00000354901 AMMECR1LQ6DCA0 310 aa7.94□□□□□ -1.14
SMG6-202ENST00000354901 CYP2G1PQ6ZSU1 146 aa7.94□□□□□ -1.14
SMG6-202ENST00000354901 TGIF2LYQ8IUE0 185 aa7.94□□□□□ -1.14
SMG6-202ENST00000354901 RDH5Q92781 318 aa7.94□□□□□ -1.14
SMG6-202ENST00000354901 SMIM12Q96EX1 92 aa7.94□□□□□ -1.14
SMG6-202ENST00000354901 WASHC3Q9Y3C0 194 aa7.94□□□□□ -1.14
SMG6-202ENST00000354901 TBL2Q9Y4P3 447 aaKnown RBP7.94□□□□□ -1.14
SMG6-202ENST00000354901 NBEAQ8NFP9 2946 aa7.94□□□□□ -1.14
SMG6-202ENST00000354901 C3orf85A0A1B0GTC6 90 aa7.94□□□□□ -1.14
SMG6-202ENST00000354901 OR2T8A6NH00 312 aa7.94□□□□□ -1.14
SMG6-202ENST00000354901 K7EP13 123 aa7.94□□□□□ -1.14
SMG6-202ENST00000354901 KBTBD11O94819 623 aa7.94□□□□□ -1.14
SMG6-202ENST00000354901 MPLP40238 635 aa7.94□□□□□ -1.14
SMG6-202ENST00000354901 IER3P46695 156 aa7.94□□□□□ -1.14
SMG6-202ENST00000354901 ZNF90Q03938 601 aa7.94□□□□□ -1.14
SMG6-202ENST00000354901 LINC00696Q6ZRV3 163 aa7.94□□□□□ -1.14
SMG6-202ENST00000354901 TUSC5Q8IXB3 177 aa7.94□□□□□ -1.14
SMG6-202ENST00000354901 H1FOOQ8IZA3 346 aaPredicted RBP7.94□□□□□ -1.14
SMG6-202ENST00000354901 OR4B1Q8NGF8 309 aa7.94□□□□□ -1.14
SMG6-202ENST00000354901 OR51H1Q8NH63 302 aa7.94□□□□□ -1.14
SMG6-202ENST00000354901 NAA38Q9BRA0 125 aaKnown RBP7.94□□□□□ -1.14
SMG6-202ENST00000354901 ICE1Q9Y2F5 2266 aa7.94□□□□□ -1.14
SMG6-202ENST00000354901 EP300Q09472 2414 aaPredicted RBP7.94□□□□□ -1.14
SMG6-202ENST00000354901 FCN1O00602 326 aa7.94□□□□□ -1.14
SMG6-202ENST00000354901 MPPED1O15442 326 aa7.94□□□□□ -1.14
SMG6-202ENST00000354901 PRDX4Q13162 271 aa7.94□□□□□ -1.14
SMG6-202ENST00000354901 MRPL21Q7Z2W9 205 aaKnown RBP7.94□□□□□ -1.14
SMG6-202ENST00000354901 TBC1D26Q86UD7 250 aa7.94□□□□□ -1.14
SMG6-202ENST00000354901 FAM58AQ8N1B3 248 aa7.94□□□□□ -1.14
SMG6-202ENST00000354901 GAPTQ8N292 157 aa7.94□□□□□ -1.14
SMG6-202ENST00000354901 OR10V1Q8NGI7 309 aa7.94□□□□□ -1.14
SMG6-202ENST00000354901 OR5D13Q8NGL4 314 aa7.94□□□□□ -1.14
SMG6-202ENST00000354901 CT55Q8WUE5 264 aa7.94□□□□□ -1.14
SMG6-202ENST00000354901 IL1F10Q8WWZ1 152 aa7.94□□□□□ -1.14
SMG6-202ENST00000354901 SLC35D1Q9NTN3 355 aa7.94□□□□□ -1.14
SMG6-202ENST00000354901 CNOT1A5YKK6 2376 aaKnown RBP7.94□□□□□ -1.14
SMG6-202ENST00000354901 MED12LQ86YW9 2145 aa7.93□□□□□ -1.14
SMG6-202ENST00000354901 IGKV1D-13A0A0B4J2D9 117 aa7.93□□□□□ -1.14
SMG6-202ENST00000354901 H0Y8G0 127 aa7.93□□□□□ -1.14
SMG6-202ENST00000354901 SIRPB1O00241 398 aa7.93□□□□□ -1.14
SMG6-202ENST00000354901 NTN3O00634 580 aaPredicted RBP7.93□□□□□ -1.14
SMG6-202ENST00000354901 IGKV1-13P0DP09 117 aa7.93□□□□□ -1.14
SMG6-202ENST00000354901 PCBD1P61457 104 aa7.93□□□□□ -1.14
SMG6-202ENST00000354901 Q56UQ5 140 aa7.93□□□□□ -1.14
SMG6-202ENST00000354901 SPATA46Q5T0L3 261 aa7.93□□□□□ -1.14
SMG6-202ENST00000354901 CCDC71LQ8N9Z2 235 aa7.93□□□□□ -1.14
SMG6-202ENST00000354901 KCNE4Q8WWG9 221 aa7.93□□□□□ -1.14
SMG6-202ENST00000354901 CCL28Q9NRJ3 127 aa7.93□□□□□ -1.14
SMG6-202ENST00000354901 LYRM2Q9NU23 88 aaPredicted RBP7.93□□□□□ -1.14
SMG6-202ENST00000354901 IGHV2OR16-5A0A0B4J2B6 119 aa7.93□□□□□ -1.14
SMG6-202ENST00000354901 ZNF732B4DXR9 585 aa7.93□□□□□ -1.14
SMG6-202ENST00000354901 SYNGR1O43759 233 aa7.93□□□□□ -1.14
SMG6-202ENST00000354901 FRMD6-AS1P0C7T7 363 aa7.93□□□□□ -1.14
SMG6-202ENST00000354901 MDH2P40926 338 aaKnown RBP7.93□□□□□ -1.14
SMG6-202ENST00000354901 SPANXN5Q5MJ07 72 aa7.93□□□□□ -1.14
SMG6-202ENST00000354901 DCAF12Q5T6F0 453 aa7.93□□□□□ -1.14
SMG6-202ENST00000354901 TMEM42Q69YG0 159 aa7.93□□□□□ -1.14
SMG6-202ENST00000354901 ZNF818PQ6ZRF7 136 aa7.93□□□□□ -1.14
SMG6-202ENST00000354901 MRGPRGQ86SM5 289 aa7.93□□□□□ -1.14
SMG6-202ENST00000354901 C18orf12Q96KH6 178 aa7.93□□□□□ -1.14
SMG6-202ENST00000354901 DERL1Q9BUN8 251 aa7.93□□□□□ -1.14
SMG6-202ENST00000354901 DECR2Q9NUI1 292 aa7.93□□□□□ -1.14
SMG6-202ENST00000354901 ZNF503-AS2A6NEH8 195 aa7.93□□□□□ -1.14
SMG6-202ENST00000354901 SLC17A3O00476 420 aa7.93□□□□□ -1.14
SMG6-202ENST00000354901 IGLC2P0DOY2 106 aa7.93□□□□□ -1.14
SMG6-202ENST00000354901 IGLC3P0DOY3 106 aa7.93□□□□□ -1.14
SMG6-202ENST00000354901 WDYHV1Q96HA8 205 aa7.93□□□□□ -1.14
SMG6-202ENST00000354901 C12orf49Q9H741 205 aa7.93□□□□□ -1.14
SMG6-202ENST00000354901 DSPP15924 2871 aaKnown RBP7.92□□□□□ -1.14
SMG6-202ENST00000354901 IGHV2-70DA0A0C4DH43 119 aa7.92□□□□□ -1.14
SMG6-202ENST00000354901 MDFIC2A0A1B0GVS7 189 aa7.92□□□□□ -1.14
SMG6-202ENST00000354901 RNF212BA8MTL3 300 aa7.92□□□□□ -1.14
SMG6-202ENST00000354901 GABRA2P47869 451 aa7.92□□□□□ -1.14
SMG6-202ENST00000354901 TCL1AP56279 114 aa7.92□□□□□ -1.14
SMG6-202ENST00000354901 EIF3IQ13347 325 aaKnown RBP7.92□□□□□ -1.14
SMG6-202ENST00000354901 LINC01551Q86U37 167 aa7.92□□□□□ -1.14
SMG6-202ENST00000354901 SIGLEC12Q96PQ1 595 aa7.92□□□□□ -1.14
SMG6-202ENST00000354901 FGF23Q9GZV9 251 aaPredicted RBP7.92□□□□□ -1.14
SMG6-202ENST00000354901 MRPL18Q9H0U6 180 aaKnown RBP7.92□□□□□ -1.14
SMG6-202ENST00000354901 LOXL2Q9Y4K0 774 aa7.92□□□□□ -1.14
SMG6-202ENST00000354901 CEP250Q9BV73 2442 aa7.92□□□□□ -1.14
SMG6-202ENST00000354901 PPBPP02775 128 aa7.92□□□□□ -1.14
SMG6-202ENST00000354901 KITLGP21583 273 aa7.92□□□□□ -1.14
SMG6-202ENST00000354901 TSPOP30536 169 aa7.92□□□□□ -1.14
SMG6-202ENST00000354901 MAGEA5P43359 124 aa7.92□□□□□ -1.14
SMG6-202ENST00000354901 DAZAP2Q15038 168 aaPredicted RBP7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms