RNA–Protein interactions for RNA: ENST00000349228.8

TNFSF13-202, Transcript of TNF superfamily member 13, humanhuman

TSL 1 (best) BASIC

Gene TNFSF13, Length 2,036 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF13-202ENST00000349228 MPDU1O75352 247 aa12.88□□□□□ -0.35
TNFSF13-202ENST00000349228 IGHV3-13P01766 116 aa12.88□□□□□ -0.35
TNFSF13-202ENST00000349228 DUTP33316 252 aaKnown RBP12.88□□□□□ -0.35
TNFSF13-202ENST00000349228 SPCS3P61009 180 aa12.88□□□□□ -0.35
TNFSF13-202ENST00000349228 ACOT6Q3I5F7 207 aaPredicted RBP12.88□□□□□ -0.35
TNFSF13-202ENST00000349228 MORN2Q502X0 79 aa12.88□□□□□ -0.35
TNFSF13-202ENST00000349228 FFAR4Q5NUL3 377 aa12.88□□□□□ -0.35
TNFSF13-202ENST00000349228 ZNF343Q6P1L6 599 aa12.88□□□□□ -0.35
TNFSF13-202ENST00000349228 ACSM6Q6P461 480 aa12.88□□□□□ -0.35
TNFSF13-202ENST00000349228 OR2Z1Q8NG97 314 aa12.88□□□□□ -0.35
TNFSF13-202ENST00000349228 FAM210BQ96KR6 192 aa12.88□□□□□ -0.35
TNFSF13-202ENST00000349228 DIRC2Q96SL1 478 aa12.88□□□□□ -0.35
TNFSF13-202ENST00000349228 OPN3Q9H1Y3 402 aaPredicted RBP12.88□□□□□ -0.35
TNFSF13-202ENST00000349228 FZR1Q9UM11 496 aa12.88□□□□□ -0.35
TNFSF13-202ENST00000349228 HSBP1L1C9JCN9 74 aa12.88□□□□□ -0.35
TNFSF13-202ENST00000349228 F2RL2O00254 374 aa12.88□□□□□ -0.35
TNFSF13-202ENST00000349228 KBTBD11O94819 623 aa12.88□□□□□ -0.35
TNFSF13-202ENST00000349228 IGKV1D-33P01593 117 aa12.88□□□□□ -0.35
TNFSF13-202ENST00000349228 IGKV1-33P01594 117 aa12.88□□□□□ -0.35
TNFSF13-202ENST00000349228 CD55P08174 381 aa12.88□□□□□ -0.35
TNFSF13-202ENST00000349228 PDLIM3Q53GG5 364 aaPredicted RBP12.88□□□□□ -0.35
TNFSF13-202ENST00000349228 TIMM23BQ5SRD1 257 aa12.88□□□□□ -0.35
TNFSF13-202ENST00000349228 RFESDQ8TAC1 157 aa12.88□□□□□ -0.35
TNFSF13-202ENST00000349228 NPCDR1Q9BY65 106 aa12.88□□□□□ -0.35
TNFSF13-202ENST00000349228 OR6C3Q9NZP0 311 aa12.88□□□□□ -0.35
TNFSF13-202ENST00000349228 GNG12Q9UBI6 72 aa12.88□□□□□ -0.35
TNFSF13-202ENST00000349228 ELOA3CA0A087WX78 387 aaPredicted RBP12.87□□□□□ -0.35
TNFSF13-202ENST00000349228 TGIF2-C20orf24A0A0A6YYL0 155 aa12.87□□□□□ -0.35
TNFSF13-202ENST00000349228 SMCO3A2RU48 225 aa12.87□□□□□ -0.35
TNFSF13-202ENST00000349228 S100PP25815 95 aa12.87□□□□□ -0.35
TNFSF13-202ENST00000349228 CD81P60033 236 aa12.87□□□□□ -0.35
TNFSF13-202ENST00000349228 SMIM7Q9BQ49 75 aa12.87□□□□□ -0.35
TNFSF13-202ENST00000349228 URGCP-MRPS24S4R325 110 aa12.87□□□□□ -0.35
TNFSF13-202ENST00000349228 IGKV1D-17A0A075B6S4 117 aa12.86□□□□□ -0.35
TNFSF13-202ENST00000349228 IGHV3-43A0A0B4J1X8 118 aa12.86□□□□□ -0.35
TNFSF13-202ENST00000349228 IGHV3-43DP0DP04 118 aa12.86□□□□□ -0.35
TNFSF13-202ENST00000349228 GLRXP35754 106 aa12.86□□□□□ -0.35
TNFSF13-202ENST00000349228 RAB7AP51149 207 aa12.86□□□□□ -0.35
TNFSF13-202ENST00000349228 ERVK-16P61578 105 aa12.86□□□□□ -0.35
TNFSF13-202ENST00000349228 DEFB109BQ30KR1 87 aa12.86□□□□□ -0.35
TNFSF13-202ENST00000349228 NCR3LG1Q68D85 454 aa12.86□□□□□ -0.35
TNFSF13-202ENST00000349228 IGFL3Q6UXB1 125 aa12.86□□□□□ -0.35
TNFSF13-202ENST00000349228 SLC16A13Q7RTY0 426 aa12.86□□□□□ -0.35
TNFSF13-202ENST00000349228 TPRX1Q8N7U7 411 aa12.86□□□□□ -0.35
TNFSF13-202ENST00000349228 S100PBPQ96BU1 408 aa12.86□□□□□ -0.35
TNFSF13-202ENST00000349228 DOCK7Q96N67 2140 aa12.86□□□□□ -0.35
TNFSF13-202ENST00000349228 OR51M1Q9H341 326 aa12.86□□□□□ -0.35
TNFSF13-202ENST00000349228 NIT2Q9NQR4 276 aa12.86□□□□□ -0.35
TNFSF13-202ENST00000349228 DOK5Q9P104 306 aa12.86□□□□□ -0.35
TNFSF13-202ENST00000349228 SPAARA0A1B0GVQ0 90 aa12.86□□□□□ -0.35
TNFSF13-202ENST00000349228 SEC14L6B5MCN3 397 aa12.86□□□□□ -0.35
TNFSF13-202ENST00000349228 NDUFS8O00217 210 aa12.86□□□□□ -0.35
TNFSF13-202ENST00000349228 WT1P19544 449 aaPredicted RBP12.86□□□□□ -0.35
TNFSF13-202ENST00000349228 SRSF6Q13247 344 aaKnown RBP12.86□□□□□ -0.35
TNFSF13-202ENST00000349228 EDDM3AQ14507 147 aa12.86□□□□□ -0.35
TNFSF13-202ENST00000349228 FAM53AQ6NSI3 398 aaPredicted RBP12.86□□□□□ -0.35
TNFSF13-202ENST00000349228 ZNF436-AS1Q8NC38 126 aaPredicted RBP12.86□□□□□ -0.35
TNFSF13-202ENST00000349228 OR4A16Q8NH70 328 aa12.86□□□□□ -0.35
TNFSF13-202ENST00000349228 ZDHHC16Q969W1 377 aa12.86□□□□□ -0.35
TNFSF13-202ENST00000349228 WDR83OSQ9Y284 106 aa12.86□□□□□ -0.35
TNFSF13-202ENST00000349228 C15orf62A8K5M9 175 aa12.85□□□□□ -0.35
TNFSF13-202ENST00000349228 DEFB108AA8MXU0 73 aa12.85□□□□□ -0.35
TNFSF13-202ENST00000349228 CRYAAP02489 173 aa12.85□□□□□ -0.35
TNFSF13-202ENST00000349228 NDUFA6P56556 154 aa12.85□□□□□ -0.35
TNFSF13-202ENST00000349228 FAM180AQ6UWF9 173 aa12.85□□□□□ -0.35
TNFSF13-202ENST00000349228 RAB1CQ92928 201 aa12.85□□□□□ -0.35
TNFSF13-202ENST00000349228 RAB24Q969Q5 203 aa12.85□□□□□ -0.35
TNFSF13-202ENST00000349228 QTRT1Q9BXR0 403 aaKnown RBP12.85□□□□□ -0.35
TNFSF13-202ENST00000349228 PCNX2A6NKB5 2137 aa12.84□□□□□ -0.35
TNFSF13-202ENST00000349228 FCGR3BO75015 233 aa12.84□□□□□ -0.35
TNFSF13-202ENST00000349228 LHBP01229 141 aa12.84□□□□□ -0.35
TNFSF13-202ENST00000349228 FABP1P07148 127 aa12.84□□□□□ -0.35
TNFSF13-202ENST00000349228 EGR1P18146 543 aa12.84□□□□□ -0.35
TNFSF13-202ENST00000349228 CD1BP29016 333 aa12.84□□□□□ -0.35
TNFSF13-202ENST00000349228 S100A2P29034 98 aa12.84□□□□□ -0.35
TNFSF13-202ENST00000349228 KLF3P57682 345 aaPredicted RBP12.84□□□□□ -0.35
TNFSF13-202ENST00000349228 NKX6-1P78426 367 aaPredicted RBP12.84□□□□□ -0.35
TNFSF13-202ENST00000349228 BSXQ3C1V8 233 aa12.84□□□□□ -0.35
TNFSF13-202ENST00000349228 PRAMEF5Q5TYX0 476 aa12.84□□□□□ -0.35
TNFSF13-202ENST00000349228 GCSAMQ8N6F7 178 aa12.84□□□□□ -0.35
TNFSF13-202ENST00000349228 MEGF10Q96KG7 1140 aa12.84□□□□□ -0.35
TNFSF13-202ENST00000349228 SLC25A22Q9H936 323 aa12.84□□□□□ -0.35
TNFSF13-202ENST00000349228 DUSP13Q9UII6 198 aa12.84□□□□□ -0.35
TNFSF13-202ENST00000349228 FRYLO94915 3013 aa12.84□□□□□ -0.35
TNFSF13-202ENST00000349228 HIST1H2BKO60814 126 aa12.84□□□□□ -0.35
TNFSF13-202ENST00000349228 VENTXO95231 258 aa12.84□□□□□ -0.35
TNFSF13-202ENST00000349228 TFF1P04155 84 aa12.84□□□□□ -0.35
TNFSF13-202ENST00000349228 HIST1H2BJP06899 126 aa12.84□□□□□ -0.35
TNFSF13-202ENST00000349228 HIST1H2BOP23527 126 aa12.84□□□□□ -0.35
TNFSF13-202ENST00000349228 HIST1H2BBP33778 126 aa12.84□□□□□ -0.35
TNFSF13-202ENST00000349228 TMPRSS3P57727 454 aa12.84□□□□□ -0.35
TNFSF13-202ENST00000349228 HIST1H2BDP58876 126 aa12.84□□□□□ -0.35
TNFSF13-202ENST00000349228 HIST1H2BCP62807 126 aa12.84□□□□□ -0.35
TNFSF13-202ENST00000349228 TFF3Q07654 80 aa12.84□□□□□ -0.35
TNFSF13-202ENST00000349228 HIST2H2BEQ16778 126 aa12.84□□□□□ -0.35
TNFSF13-202ENST00000349228 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.84□□□□□ -0.35
TNFSF13-202ENST00000349228 SEM1Q6ZVN7 128 aa12.84□□□□□ -0.35
TNFSF13-202ENST00000349228 HIST1H2BHQ93079 126 aa12.84□□□□□ -0.35
TNFSF13-202ENST00000349228 S1PR3Q99500 378 aa12.84□□□□□ -0.35
TNFSF13-202ENST00000349228 HIST1H2BNQ99877 126 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms