RNA–Protein interactions for RNA: ENST00000349038.8

PTBP1-201, Transcript of polypyrimidine tract binding protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTBP1, Length 3,155 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-201ENST00000349038 EPOPA6NHQ4 379 aa12.82□□□□□ -0.36
PTBP1-201ENST00000349038 TNFSF11O14788 317 aa12.82□□□□□ -0.36
PTBP1-201ENST00000349038 C3orf79P0CE67 100 aa12.82□□□□□ -0.36
PTBP1-201ENST00000349038 C1orf185Q5T7R7 199 aa12.82□□□□□ -0.36
PTBP1-201ENST00000349038 NFAM1Q8NET5 270 aaPredicted RBP12.82□□□□□ -0.36
PTBP1-201ENST00000349038 CLDN23Q96B33 292 aa12.82□□□□□ -0.36
PTBP1-201ENST00000349038 SSBP3Q9BWW4 388 aaPredicted RBP12.82□□□□□ -0.36
PTBP1-201ENST00000349038 RNASE7Q9H1E1 156 aaKnown RBP12.82□□□□□ -0.36
PTBP1-201ENST00000349038 CD207Q9UJ71 328 aa12.82□□□□□ -0.36
PTBP1-201ENST00000349038 COX11Q9Y6N1 276 aa12.82□□□□□ -0.36
PTBP1-201ENST00000349038 SYNGR1O43759 233 aa12.81□□□□□ -0.36
PTBP1-201ENST00000349038 IGKV1-5P01602 117 aa12.81□□□□□ -0.36
PTBP1-201ENST00000349038 CRYABP02511 175 aaKnown RBP12.81□□□□□ -0.36
PTBP1-201ENST00000349038 PAFAH1B2P68402 229 aa12.81□□□□□ -0.36
PTBP1-201ENST00000349038 MPV17L2Q567V2 206 aa12.81□□□□□ -0.36
PTBP1-201ENST00000349038 AMMECR1LQ6DCA0 310 aa12.81□□□□□ -0.36
PTBP1-201ENST00000349038 C1orf174Q8IYL3 243 aa12.81□□□□□ -0.36
PTBP1-201ENST00000349038 FGFBP3Q8TAT2 258 aa12.81□□□□□ -0.36
PTBP1-201ENST00000349038 RNF2Q99496 336 aa12.81□□□□□ -0.36
PTBP1-201ENST00000349038 TRAPPC2LQ9UL33 140 aa12.81□□□□□ -0.36
PTBP1-201ENST00000349038 IGKV1-39P01597 117 aa12.81□□□□□ -0.36
PTBP1-201ENST00000349038 IGKV1D-39P04432 117 aa12.81□□□□□ -0.36
PTBP1-201ENST00000349038 PTGDSP41222 190 aa12.81□□□□□ -0.36
PTBP1-201ENST00000349038 RNASEKQ6P5S7 137 aaKnown RBP12.81□□□□□ -0.36
PTBP1-201ENST00000349038 WDR74Q6RFH5 385 aaPredicted RBP12.81□□□□□ -0.36
PTBP1-201ENST00000349038 LHFPL2Q6ZUX7 228 aa12.81□□□□□ -0.36
PTBP1-201ENST00000349038 SLC35D1Q9NTN3 355 aa12.81□□□□□ -0.36
PTBP1-201ENST00000349038 POLEQ07864 2286 aa12.81□□□□□ -0.36
PTBP1-201ENST00000349038 IGLV3-32A0A0A0MS00 114 aa12.81□□□□□ -0.36
PTBP1-201ENST00000349038 RAMP3O60896 148 aa12.81□□□□□ -0.36
PTBP1-201ENST00000349038 CELA2AP08217 269 aa12.81□□□□□ -0.36
PTBP1-201ENST00000349038 TSPOP30536 169 aa12.81□□□□□ -0.36
PTBP1-201ENST00000349038 GPR6P46095 362 aaPredicted RBP12.81□□□□□ -0.36
PTBP1-201ENST00000349038 PPOXP50336 477 aa12.81□□□□□ -0.36
PTBP1-201ENST00000349038 FGFRL1Q8N441 504 aa12.81□□□□□ -0.36
PTBP1-201ENST00000349038 OR2Y1Q8NGV0 311 aa12.81□□□□□ -0.36
PTBP1-201ENST00000349038 FAM122AQ96E09 287 aa12.81□□□□□ -0.36
PTBP1-201ENST00000349038 NUDT11Q96G61 164 aa12.81□□□□□ -0.36
PTBP1-201ENST00000349038 C19orf25Q9UFG5 118 aaPredicted RBP12.81□□□□□ -0.36
PTBP1-201ENST00000349038 ASPMQ8IZT6 3477 aa12.8□□□□□ -0.36
PTBP1-201ENST00000349038 DEFB108AA8MXU0 73 aa12.8□□□□□ -0.36
PTBP1-201ENST00000349038 TRAPPC2LH3BP13 241 aa12.8□□□□□ -0.36
PTBP1-201ENST00000349038 ARL14EPLP0DKL9 152 aa12.8□□□□□ -0.36
PTBP1-201ENST00000349038 PRB4P10163 310 aaPredicted RBP12.8□□□□□ -0.36
PTBP1-201ENST00000349038 CDKN1BP46527 198 aa12.8□□□□□ -0.36
PTBP1-201ENST00000349038 CAMPP49913 170 aa12.8□□□□□ -0.36
PTBP1-201ENST00000349038 CFHR1Q03591 330 aa12.8□□□□□ -0.36
PTBP1-201ENST00000349038 ITGB1BP1O14713 200 aa12.8□□□□□ -0.36
PTBP1-201ENST00000349038 HSBP1O75506 76 aa12.8□□□□□ -0.36
PTBP1-201ENST00000349038 NUDT3O95989 172 aa12.8□□□□□ -0.36
PTBP1-201ENST00000349038 PDLIM3Q53GG5 364 aaPredicted RBP12.8□□□□□ -0.36
PTBP1-201ENST00000349038 SPATA46Q5T0L3 261 aa12.8□□□□□ -0.36
PTBP1-201ENST00000349038 SP5Q6BEB4 398 aaPredicted RBP12.8□□□□□ -0.36
PTBP1-201ENST00000349038 TMEM211Q6ICI0 200 aa12.8□□□□□ -0.36
PTBP1-201ENST00000349038 SLC24A4Q8NFF2 622 aa12.8□□□□□ -0.36
PTBP1-201ENST00000349038 C10orf35Q96D05 121 aa12.8□□□□□ -0.36
PTBP1-201ENST00000349038 FGF21Q9NSA1 209 aa12.8□□□□□ -0.36
PTBP1-201ENST00000349038 MED12LQ86YW9 2145 aa12.8□□□□□ -0.36
PTBP1-201ENST00000349038 SAP30O75446 220 aa12.79□□□□□ -0.36
PTBP1-201ENST00000349038 GPX1P07203 203 aa12.79□□□□□ -0.36
PTBP1-201ENST00000349038 TNFSF4P23510 183 aa12.79□□□□□ -0.36
PTBP1-201ENST00000349038 LCN2P80188 198 aa12.79□□□□□ -0.36
PTBP1-201ENST00000349038 STUMQ69YW2 141 aa12.79□□□□□ -0.36
PTBP1-201ENST00000349038 PRR27Q6MZM9 219 aa12.79□□□□□ -0.36
PTBP1-201ENST00000349038 NUDT10Q8NFP7 164 aa12.79□□□□□ -0.36
PTBP1-201ENST00000349038 CLEC1BQ9P126 229 aa12.79□□□□□ -0.36
PTBP1-201ENST00000349038 FBLL1A6NHQ2 334 aaKnown RBP12.79□□□□□ -0.36
PTBP1-201ENST00000349038 H0Y980 276 aa12.79□□□□□ -0.36
PTBP1-201ENST00000349038 UQCRFS1P47985 274 aa12.79□□□□□ -0.36
PTBP1-201ENST00000349038 TCTEX1D1Q8N7M0 179 aa12.79□□□□□ -0.36
PTBP1-201ENST00000349038 PCED1AQ9H1Q7 454 aa12.79□□□□□ -0.36
PTBP1-201ENST00000349038 MEGF9Q9H1U4 602 aa12.79□□□□□ -0.36
PTBP1-201ENST00000349038 CLEC5AQ9NY25 188 aa12.79□□□□□ -0.36
PTBP1-201ENST00000349038 SH2D7A6NKC9 451 aaPredicted RBP12.79□□□□□ -0.36
PTBP1-201ENST00000349038 CD24P25063 80 aa12.79□□□□□ -0.36
PTBP1-201ENST00000349038 COMPP49747 757 aaPredicted RBP12.79□□□□□ -0.36
PTBP1-201ENST00000349038 ACSF3Q4G176 576 aaPredicted RBP12.79□□□□□ -0.36
PTBP1-201ENST00000349038 ANKRD37Q7Z713 158 aa12.79□□□□□ -0.36
PTBP1-201ENST00000349038 MMD2Q8IY49 270 aa12.79□□□□□ -0.36
PTBP1-201ENST00000349038 MKXQ8IYA7 352 aa12.79□□□□□ -0.36
PTBP1-201ENST00000349038 OR1F12Q8NHA8 337 aa12.79□□□□□ -0.36
PTBP1-201ENST00000349038 RFESDQ8TAC1 157 aa12.79□□□□□ -0.36
PTBP1-201ENST00000349038 SGK494Q96LW2 274 aa12.79□□□□□ -0.36
PTBP1-201ENST00000349038 ZPBPQ9BS86 351 aa12.79□□□□□ -0.36
PTBP1-201ENST00000349038 QTRT1Q9BXR0 403 aaKnown RBP12.79□□□□□ -0.36
PTBP1-201ENST00000349038 CST9LQ9H4G1 147 aa12.79□□□□□ -0.36
PTBP1-201ENST00000349038 TNCP24821 2201 aa12.79□□□□□ -0.36
PTBP1-201ENST00000349038 EML6Q6ZMW3 1958 aa12.78□□□□□ -0.36
PTBP1-201ENST00000349038 IGHV3-43A0A0B4J1X8 118 aa12.78□□□□□ -0.36
PTBP1-201ENST00000349038 A0A1W2PR77 199 aa12.78□□□□□ -0.36
PTBP1-201ENST00000349038 A0A1W2PRS3 328 aa12.78□□□□□ -0.36
PTBP1-201ENST00000349038 TFF1P04155 84 aa12.78□□□□□ -0.36
PTBP1-201ENST00000349038 IGHV3-43DP0DP04 118 aa12.78□□□□□ -0.36
PTBP1-201ENST00000349038 TIMP3P35625 211 aa12.78□□□□□ -0.36
PTBP1-201ENST00000349038 RPL31P62899 125 aaKnown RBP12.78□□□□□ -0.36
PTBP1-201ENST00000349038 MIC13Q5XKP0 118 aa12.78□□□□□ -0.36
PTBP1-201ENST00000349038 SRYQ05066 204 aa12.78□□□□□ -0.36
PTBP1-201ENST00000349038 YRDCQ86U90 279 aaKnown RBP12.78□□□□□ -0.36
PTBP1-201ENST00000349038 NPCDR1Q9BY65 106 aa12.78□□□□□ -0.36
PTBP1-201ENST00000349038 ZNF576Q9H609 170 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms