RNA–Protein interactions for RNA: ENST00000344204.8

TRIO-202, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIO, Length 11,100 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-202ENST00000344204 OR4C3Q8NH37 302 aa11.81□□□□□ -0.52
TRIO-202ENST00000344204 TMEM230Q96A57 120 aa11.81□□□□□ -0.52
TRIO-202ENST00000344204 FAM90A26D6RGX4 464 aa11.81□□□□□ -0.52
TRIO-202ENST00000344204 MESP1Q9BRJ9 268 aa11.81□□□□□ -0.52
TRIO-202ENST00000344204 TIMM23BQ5SRD1 257 aa11.81□□□□□ -0.52
TRIO-202ENST00000344204 Q6ZNB5 142 aa11.81□□□□□ -0.52
TRIO-202ENST00000344204 LIMS2Q7Z4I7 341 aa11.81□□□□□ -0.52
TRIO-202ENST00000344204 OR1L1Q8NH94 360 aa11.81□□□□□ -0.52
TRIO-202ENST00000344204 MARS2Q96GW9 593 aaKnown RBP11.81□□□□□ -0.52
TRIO-202ENST00000344204 PLXNA4Q9HCM2 1894 aa11.81□□□□□ -0.52
TRIO-202ENST00000344204 FAM71F2Q6NXP2 309 aa11.81□□□□□ -0.52
TRIO-202ENST00000344204 SLC37A2Q8TED4 501 aa11.81□□□□□ -0.52
TRIO-202ENST00000344204 IGHV3-64DA0A0J9YX35 117 aa11.81□□□□□ -0.52
TRIO-202ENST00000344204 ALG1L2C9J202 215 aa11.81□□□□□ -0.52
TRIO-202ENST00000344204 CYSLTR1Q9Y271 337 aa11.81□□□□□ -0.52
TRIO-202ENST00000344204 C20orf144Q9BQM9 153 aa11.81□□□□□ -0.52
TRIO-202ENST00000344204 HMGA1P17096 107 aaKnown RBP11.8□□□□□ -0.52
TRIO-202ENST00000344204 TCF23Q7RTU1 214 aa11.8□□□□□ -0.52
TRIO-202ENST00000344204 RNF126Q9BV68 326 aa11.8□□□□□ -0.52
TRIO-202ENST00000344204 A0A0G2JLM5 398 aa11.8□□□□□ -0.52
TRIO-202ENST00000344204 ADCYAP1P18509 176 aa11.8□□□□□ -0.52
TRIO-202ENST00000344204 TM4SF20Q53R12 229 aa11.8□□□□□ -0.52
TRIO-202ENST00000344204 C12orf49Q9H741 205 aa11.8□□□□□ -0.52
TRIO-202ENST00000344204 TMEM249Q2WGJ8 235 aa11.8□□□□□ -0.52
TRIO-202ENST00000344204 DEFB133Q30KQ1 61 aa11.8□□□□□ -0.52
TRIO-202ENST00000344204 RHBDD2Q6NTF9 364 aa11.8□□□□□ -0.52
TRIO-202ENST00000344204 LOXL4Q96JB6 756 aa11.8□□□□□ -0.52
TRIO-202ENST00000344204 A0A0G2JMM0 328 aa11.8□□□□□ -0.52
TRIO-202ENST00000344204 A0A1W2PPB8 328 aa11.8□□□□□ -0.52
TRIO-202ENST00000344204 KIR3DP1A8MWS1 328 aa11.8□□□□□ -0.52
TRIO-202ENST00000344204 GPBAR1Q8TDU6 330 aa11.8□□□□□ -0.52
TRIO-202ENST00000344204 PPIL1Q9Y3C6 166 aa11.8□□□□□ -0.52
TRIO-202ENST00000344204 OOEPA6NGQ2 149 aa11.8□□□□□ -0.52
TRIO-202ENST00000344204 ASAH2BP0C7U1 165 aa11.8□□□□□ -0.52
TRIO-202ENST00000344204 MC5RP33032 325 aa11.8□□□□□ -0.52
TRIO-202ENST00000344204 CKS2P33552 79 aa11.8□□□□□ -0.52
TRIO-202ENST00000344204 PRNTQ86SH4 94 aa11.8□□□□□ -0.52
TRIO-202ENST00000344204 TPSD1Q9BZJ3 242 aa11.8□□□□□ -0.52
TRIO-202ENST00000344204 GEMIN7Q9H840 131 aaKnown RBP11.8□□□□□ -0.52
TRIO-202ENST00000344204 RAB9AP51151 201 aa11.8□□□□□ -0.52
TRIO-202ENST00000344204 ACSF3Q4G176 576 aaPredicted RBP11.8□□□□□ -0.52
TRIO-202ENST00000344204 ZBTB34Q8NCN2 500 aa11.8□□□□□ -0.52
TRIO-202ENST00000344204 G6PC2Q9NQR9 355 aa11.8□□□□□ -0.52
TRIO-202ENST00000344204 A0A1W2PPC4 97 aa11.8□□□□□ -0.52
TRIO-202ENST00000344204 MAP1LC3AQ9H492 121 aa11.8□□□□□ -0.52
TRIO-202ENST00000344204 UPK3AO75631 287 aa11.8□□□□□ -0.52
TRIO-202ENST00000344204 VMA21Q3ZAQ7 101 aa11.8□□□□□ -0.52
TRIO-202ENST00000344204 EGLN1Q9GZT9 426 aa11.79□□□□□ -0.52
TRIO-202ENST00000344204 SCRG1O75711 98 aa11.79□□□□□ -0.52
TRIO-202ENST00000344204 ATP5IP56385 69 aaPredicted RBP11.79□□□□□ -0.52
TRIO-202ENST00000344204 PRNDQ9UKY0 176 aa11.79□□□□□ -0.52
TRIO-202ENST00000344204 NEU1Q99519 415 aa11.79□□□□□ -0.52
TRIO-202ENST00000344204 RPL36A-HNRNPH2H7BZ11 118 aa11.79□□□□□ -0.52
TRIO-202ENST00000344204 NRG2O14511 850 aaPredicted RBP11.79□□□□□ -0.52
TRIO-202ENST00000344204 GRAMD2BQ96HH9 432 aa11.79□□□□□ -0.52
TRIO-202ENST00000344204 PLSCR2Q9NRY7 297 aa11.79□□□□□ -0.52
TRIO-202ENST00000344204 IL36GQ9NZH8 169 aa11.79□□□□□ -0.52
TRIO-202ENST00000344204 SNAI2O43623 268 aa11.79□□□□□ -0.52
TRIO-202ENST00000344204 IGHV2-5P01817 119 aa11.79□□□□□ -0.52
TRIO-202ENST00000344204 KLRB1Q12918 225 aa11.79□□□□□ -0.52
TRIO-202ENST00000344204 WBP2Q969T9 261 aa11.79□□□□□ -0.52
TRIO-202ENST00000344204 ZNF785A8K8V0 405 aa11.79□□□□□ -0.52
TRIO-202ENST00000344204 KIR2DL1P43626 348 aaPredicted RBP11.79□□□□□ -0.52
TRIO-202ENST00000344204 KIR2DL2P43627 348 aaPredicted RBP11.79□□□□□ -0.52
TRIO-202ENST00000344204 IGHV3-20A0A0C4DH32 117 aa11.79□□□□□ -0.52
TRIO-202ENST00000344204 C1orf174Q8IYL3 243 aa11.79□□□□□ -0.52
TRIO-202ENST00000344204 KISS1RQ969F8 398 aaPredicted RBP11.79□□□□□ -0.52
TRIO-202ENST00000344204 MRPS16Q9Y3D3 137 aaKnown RBP11.79□□□□□ -0.52
TRIO-202ENST00000344204 FAM181BA6NEQ2 426 aa11.79□□□□□ -0.52
TRIO-202ENST00000344204 TNFRSF4P43489 277 aa11.78□□□□□ -0.52
TRIO-202ENST00000344204 SPATA46Q5T0L3 261 aa11.78□□□□□ -0.52
TRIO-202ENST00000344204 ATP6V0BQ99437 205 aa11.78□□□□□ -0.52
TRIO-202ENST00000344204 TYMSP04818 313 aa11.78□□□□□ -0.52
TRIO-202ENST00000344204 GAGE2BQ13066 116 aa11.78□□□□□ -0.52
TRIO-202ENST00000344204 GAGE13Q4V321 117 aa11.78□□□□□ -0.52
TRIO-202ENST00000344204 GAGE2EQ4V326 116 aa11.78□□□□□ -0.52
TRIO-202ENST00000344204 MIC13Q5XKP0 118 aa11.78□□□□□ -0.52
TRIO-202ENST00000344204 GAGE2DQ9UEU5 116 aa11.78□□□□□ -0.52
TRIO-202ENST00000344204 KBTBD11-OT1A0A1B0GTJ5 212 aa11.78□□□□□ -0.52
TRIO-202ENST00000344204 F5H697 171 aa11.78□□□□□ -0.52
TRIO-202ENST00000344204 IZUMO4Q1ZYL8 232 aa11.78□□□□□ -0.52
TRIO-202ENST00000344204 TEX38Q6PEX7 206 aa11.78□□□□□ -0.52
TRIO-202ENST00000344204 SLC23A3Q6PIS1 610 aa11.78□□□□□ -0.52
TRIO-202ENST00000344204 NOGQ13253 232 aa11.78□□□□□ -0.52
TRIO-202ENST00000344204 BHLHA9Q7RTU4 235 aa11.78□□□□□ -0.52
TRIO-202ENST00000344204 SPRED2Q7Z698 418 aa11.78□□□□□ -0.52
TRIO-202ENST00000344204 RLN3Q8WXF3 142 aa11.78□□□□□ -0.52
TRIO-202ENST00000344204 RPL23P62829 140 aaKnown RBP11.78□□□□□ -0.52
TRIO-202ENST00000344204 ATG2AQ2TAZ0 1938 aa11.78□□□□□ -0.52
TRIO-202ENST00000344204 TSPAN7P41732 249 aa11.78□□□□□ -0.52
TRIO-202ENST00000344204 GLI3P10071 1580 aa11.78□□□□□ -0.52
TRIO-202ENST00000344204 FAM157BP0CG42 384 aa11.78□□□□□ -0.52
TRIO-202ENST00000344204 SRSF4Q08170 494 aaKnown RBP11.78□□□□□ -0.52
TRIO-202ENST00000344204 RPL30P62888 115 aaKnown RBP11.77□□□□□ -0.52
TRIO-202ENST00000344204 HSD52Q0P140 79 aa11.77□□□□□ -0.52
TRIO-202ENST00000344204 C12orf76Q8N812 135 aaPredicted RBP11.77□□□□□ -0.52
TRIO-202ENST00000344204 GPR146Q96CH1 333 aa11.77□□□□□ -0.52
TRIO-202ENST00000344204 DTX4Q9Y2E6 619 aa11.77□□□□□ -0.52
TRIO-202ENST00000344204 PRRC2AP48634 2157 aaKnown RBP11.77□□□□□ -0.52
TRIO-202ENST00000344204 TRAV8-2A0A0B4J237 113 aa11.77□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms