RNA–Protein interactions for RNA: ENST00000343257.6

CLCN1-201, Transcript of chloride voltage-gated channel 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLCN1, Length 3,172 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1-201ENST00000343257 PIAS2O75928 621 aa12.5□□□□□ -0.41
CLCN1-201ENST00000343257 LIFP15018 202 aa12.5□□□□□ -0.41
CLCN1-201ENST00000343257 SRYQ05066 204 aa12.5□□□□□ -0.41
CLCN1-201ENST00000343257 FXYD3Q14802 87 aa12.5□□□□□ -0.41
CLCN1-201ENST00000343257 C17orf82Q86X59 251 aaPredicted RBP12.5□□□□□ -0.41
CLCN1-201ENST00000343257 LYG1Q8N1E2 194 aa12.5□□□□□ -0.41
CLCN1-201ENST00000343257 A0A1W2PR77 199 aa12.49□□□□□ -0.41
CLCN1-201ENST00000343257 LNP1A1A4G5 178 aa12.49□□□□□ -0.41
CLCN1-201ENST00000343257 CEBPDP49716 269 aaPredicted RBP12.49□□□□□ -0.41
CLCN1-201ENST00000343257 YPEL3P61236 119 aaPredicted RBP12.49□□□□□ -0.41
CLCN1-201ENST00000343257 SSMEM1Q8WWF3 244 aa12.49□□□□□ -0.41
CLCN1-201ENST00000343257 QTRT1Q9BXR0 403 aaKnown RBP12.49□□□□□ -0.41
CLCN1-201ENST00000343257 PRRG4Q9BZD6 226 aa12.49□□□□□ -0.41
CLCN1-201ENST00000343257 COL5A1P20908 1838 aaPredicted RBP12.49□□□□□ -0.41
CLCN1-201ENST00000343257 IGHV1OR15-9A0A0B4J2B8 117 aa12.49□□□□□ -0.41
CLCN1-201ENST00000343257 PDE6DO43924 150 aa12.49□□□□□ -0.41
CLCN1-201ENST00000343257 FAM58AQ8N1B3 248 aa12.49□□□□□ -0.41
CLCN1-201ENST00000343257 K7EN84 100 aa12.49□□□□□ -0.41
CLCN1-201ENST00000343257 RRHO14718 337 aa12.49□□□□□ -0.41
CLCN1-201ENST00000343257 TFF1P04155 84 aa12.49□□□□□ -0.41
CLCN1-201ENST00000343257 GPX1P07203 203 aa12.49□□□□□ -0.41
CLCN1-201ENST00000343257 OR4B1Q8NGF8 309 aa12.49□□□□□ -0.41
CLCN1-201ENST00000343257 CPT1CQ8TCG5 803 aa12.49□□□□□ -0.41
CLCN1-201ENST00000343257 ALKBH7Q9BT30 221 aaPredicted RBP12.49□□□□□ -0.41
CLCN1-201ENST00000343257 OR2D2Q9H210 308 aa12.49□□□□□ -0.41
CLCN1-201ENST00000343257 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa12.48□□□□□ -0.41
CLCN1-201ENST00000343257 SYNGR4O95473 234 aa12.48□□□□□ -0.41
CLCN1-201ENST00000343257 SELENOTP62341 195 aa12.48□□□□□ -0.41
CLCN1-201ENST00000343257 MIC13Q5XKP0 118 aa12.48□□□□□ -0.41
CLCN1-201ENST00000343257 MRPL54Q6P161 138 aaKnown RBP12.48□□□□□ -0.41
CLCN1-201ENST00000343257 C1orf174Q8IYL3 243 aa12.48□□□□□ -0.41
CLCN1-201ENST00000343257 Q8N976 141 aa12.48□□□□□ -0.41
CLCN1-201ENST00000343257 ST6GALNAC6Q969X2 333 aa12.48□□□□□ -0.41
CLCN1-201ENST00000343257 UQCR10Q9UDW1 63 aa12.48□□□□□ -0.41
CLCN1-201ENST00000343257 C17orf98A8MV24 154 aa12.48□□□□□ -0.41
CLCN1-201ENST00000343257 ZNF253O75346 499 aa12.48□□□□□ -0.41
CLCN1-201ENST00000343257 DSCR4P56555 118 aaPredicted RBP12.48□□□□□ -0.41
CLCN1-201ENST00000343257 ARF1P84077 181 aaKnown RBP12.48□□□□□ -0.41
CLCN1-201ENST00000343257 LTC4SQ16873 150 aa12.48□□□□□ -0.41
CLCN1-201ENST00000343257 CEACAM21Q3KPI0 293 aa12.48□□□□□ -0.41
CLCN1-201ENST00000343257 WIPI1Q5MNZ9 446 aaPredicted RBP12.48□□□□□ -0.41
CLCN1-201ENST00000343257 FAM234AQ9H0X4 552 aa12.48□□□□□ -0.41
CLCN1-201ENST00000343257 PCED1AQ9H1Q7 454 aa12.48□□□□□ -0.41
CLCN1-201ENST00000343257 KNTC1P50748 2209 aa12.48□□□□□ -0.41
CLCN1-201ENST00000343257 NKX6-3A6NJ46 265 aa12.47□□□□□ -0.41
CLCN1-201ENST00000343257 IGLC2P0DOY2 106 aa12.47□□□□□ -0.41
CLCN1-201ENST00000343257 IGLC3P0DOY3 106 aa12.47□□□□□ -0.41
CLCN1-201ENST00000343257 SAPCD1Q5SSQ6 148 aa12.47□□□□□ -0.41
CLCN1-201ENST00000343257 SLC25A45Q8N413 288 aa12.47□□□□□ -0.41
CLCN1-201ENST00000343257 RNF2Q99496 336 aa12.47□□□□□ -0.41
CLCN1-201ENST00000343257 PROK2Q9HC23 129 aa12.47□□□□□ -0.41
CLCN1-201ENST00000343257 CLEC1BQ9P126 229 aa12.47□□□□□ -0.41
CLCN1-201ENST00000343257 LRRC30A6NM36 301 aa12.47□□□□□ -0.41
CLCN1-201ENST00000343257 PMS2P5A8MQ11 134 aa12.47□□□□□ -0.41
CLCN1-201ENST00000343257 DEFB108AA8MXU0 73 aa12.47□□□□□ -0.41
CLCN1-201ENST00000343257 C17orf112F2Z3M2 114 aa12.47□□□□□ -0.41
CLCN1-201ENST00000343257 CD27P26842 260 aa12.47□□□□□ -0.41
CLCN1-201ENST00000343257 RAC1P63000 192 aa12.47□□□□□ -0.41
CLCN1-201ENST00000343257 TRIM61Q5EBN2 209 aa12.47□□□□□ -0.41
CLCN1-201ENST00000343257 SPATA31B1PQ5VZV4 182 aa12.47□□□□□ -0.41
CLCN1-201ENST00000343257 C19orf25Q9UFG5 118 aaPredicted RBP12.47□□□□□ -0.41
CLCN1-201ENST00000343257 YTHDF2Q9Y5A9 579 aaKnown RBP12.47□□□□□ -0.41
CLCN1-201ENST00000343257 IGHV3-43A0A0B4J1X8 118 aa12.46□□□□□ -0.41
CLCN1-201ENST00000343257 RFPL3SP0C7P2 107 aa12.46□□□□□ -0.41
CLCN1-201ENST00000343257 IGHV3-43DP0DP04 118 aa12.46□□□□□ -0.41
CLCN1-201ENST00000343257 RPL31P62899 125 aaKnown RBP12.46□□□□□ -0.41
CLCN1-201ENST00000343257 ATP6V1FQ16864 119 aa12.46□□□□□ -0.41
CLCN1-201ENST00000343257 WDR74Q6RFH5 385 aaPredicted RBP12.46□□□□□ -0.41
CLCN1-201ENST00000343257 MMD2Q8IY49 270 aa12.46□□□□□ -0.41
CLCN1-201ENST00000343257 OR4C5Q8NGB2 326 aa12.46□□□□□ -0.41
CLCN1-201ENST00000343257 OR52L2PQ8NGH6 319 aa12.46□□□□□ -0.41
CLCN1-201ENST00000343257 SLC45A2Q9UMX9 530 aa12.46□□□□□ -0.41
CLCN1-201ENST00000343257 FAM90A10PA6NDY2 464 aa12.46□□□□□ -0.41
CLCN1-201ENST00000343257 FAM90A18PA6NE21 464 aa12.46□□□□□ -0.41
CLCN1-201ENST00000343257 ZNF503-AS2A6NEH8 195 aa12.46□□□□□ -0.41
CLCN1-201ENST00000343257 FAM90A16PA6NEW6 464 aa12.46□□□□□ -0.41
CLCN1-201ENST00000343257 FAM90A20PA6NIJ5 464 aa12.46□□□□□ -0.41
CLCN1-201ENST00000343257 FAM90A8PA6NJQ4 464 aa12.46□□□□□ -0.41
CLCN1-201ENST00000343257 FAM90A7PA6NKC0 464 aa12.46□□□□□ -0.41
CLCN1-201ENST00000343257 FAM90A22PA8MWA6 464 aa12.46□□□□□ -0.41
CLCN1-201ENST00000343257 FAM90A12PA8MX19 464 aa12.46□□□□□ -0.41
CLCN1-201ENST00000343257 FAM90A5PA8MXJ8 464 aa12.46□□□□□ -0.41
CLCN1-201ENST00000343257 FAM90A23PA8MXZ1 464 aa12.46□□□□□ -0.41
CLCN1-201ENST00000343257 TMPRSS2O15393 492 aa12.46□□□□□ -0.41
CLCN1-201ENST00000343257 FAM90A15PP0C7V4 464 aa12.46□□□□□ -0.41
CLCN1-201ENST00000343257 FAM90A13PP0C7W8 464 aa12.46□□□□□ -0.41
CLCN1-201ENST00000343257 FAM90A14PP0C7W9 464 aa12.46□□□□□ -0.41
CLCN1-201ENST00000343257 FAM90A24PP0C7X0 464 aa12.46□□□□□ -0.41
CLCN1-201ENST00000343257 C3orf79P0CE67 100 aa12.46□□□□□ -0.41
CLCN1-201ENST00000343257 PCBD1P61457 104 aa12.46□□□□□ -0.41
CLCN1-201ENST00000343257 DOLPP1Q86YN1 238 aa12.46□□□□□ -0.41
CLCN1-201ENST00000343257 OR10D3Q8NH80 312 aa12.46□□□□□ -0.41
CLCN1-201ENST00000343257 C1QTNF5Q9BXJ0 243 aa12.46□□□□□ -0.41
CLCN1-201ENST00000343257 STRADBQ9C0K7 418 aa12.46□□□□□ -0.41
CLCN1-201ENST00000343257 KCNIP2Q9NS61 270 aa12.46□□□□□ -0.41
CLCN1-201ENST00000343257 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.46□□□□□ -0.41
CLCN1-201ENST00000343257 IL36BQ9NZH7 164 aa12.46□□□□□ -0.41
CLCN1-201ENST00000343257 HSPB7Q9UBY9 170 aa12.46□□□□□ -0.41
CLCN1-201ENST00000343257 DOCK10Q96BY6 2186 aa12.46□□□□□ -0.42
CLCN1-201ENST00000343257 CD99P14209 185 aa12.46□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms