RNA–Protein interactions for RNA: ENST00000342988.7

SMAD4-201, Transcript of SMAD family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMAD4, Length 8,769 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-201ENST00000342988 PDCD1Q15116 288 aa15.37■□□□□ 0.05
SMAD4-201ENST00000342988 RHNO1Q9BSD3 238 aa15.37■□□□□ 0.05
SMAD4-201ENST00000342988 HMX2A2RU54 273 aa15.37■□□□□ 0.05
SMAD4-201ENST00000342988 PGPA6NDG6 321 aa15.37■□□□□ 0.05
SMAD4-201ENST00000342988 VWC2LB2RUY7 222 aa15.37■□□□□ 0.05
SMAD4-201ENST00000342988 UCP3P55916 312 aa15.37■□□□□ 0.05
SMAD4-201ENST00000342988 LCN2P80188 198 aa15.37■□□□□ 0.05
SMAD4-201ENST00000342988 WIPI1Q5MNZ9 446 aaPredicted RBP15.37■□□□□ 0.05
SMAD4-201ENST00000342988 SUMO4Q6EEV6 95 aa15.37■□□□□ 0.05
SMAD4-201ENST00000342988 SIGLEC7Q9Y286 467 aa15.37■□□□□ 0.05
SMAD4-201ENST00000342988 IGKV6-21A0A0C4DH24 114 aa15.37■□□□□ 0.05
SMAD4-201ENST00000342988 GAGE2BQ13066 116 aa15.37■□□□□ 0.05
SMAD4-201ENST00000342988 DMRTC1Q5HYR2 192 aa15.37■□□□□ 0.05
SMAD4-201ENST00000342988 MAVSQ7Z434 540 aa15.37■□□□□ 0.05
SMAD4-201ENST00000342988 MEX3AA1L020 520 aaKnown RBP15.37■□□□□ 0.05
SMAD4-201ENST00000342988 RPL27AP46776 148 aaKnown RBP15.37■□□□□ 0.05
SMAD4-201ENST00000342988 VAX1Q5SQQ9 334 aa15.37■□□□□ 0.05
SMAD4-201ENST00000342988 C5orf30Q96GV9 206 aa15.37■□□□□ 0.05
SMAD4-201ENST00000342988 TCRBV16S1A1N1A0A5B0 115 aa15.36■□□□□ 0.05
SMAD4-201ENST00000342988 CCL7P80098 99 aa15.36■□□□□ 0.05
SMAD4-201ENST00000342988 CITED1Q99966 193 aa15.36■□□□□ 0.05
SMAD4-201ENST00000342988 RBMY1FQ15415 496 aaKnown RBP15.36■□□□□ 0.05
SMAD4-201ENST00000342988 A0A1W2PRD5 423 aa15.36■□□□□ 0.05
SMAD4-201ENST00000342988 A0A1W2PRF3 423 aa15.36■□□□□ 0.05
SMAD4-201ENST00000342988 A0A1W2PRM7 423 aa15.36■□□□□ 0.05
SMAD4-201ENST00000342988 Q6AWC8 147 aa15.36■□□□□ 0.05
SMAD4-201ENST00000342988 SLIRPQ9GZT3 109 aaKnown RBP15.36■□□□□ 0.05
SMAD4-201ENST00000342988 OR4D11Q8NGI4 311 aa15.36■□□□□ 0.05
SMAD4-201ENST00000342988 FAM216AQ8WUB2 273 aa15.36■□□□□ 0.05
SMAD4-201ENST00000342988 ZNF415Q09FC8 603 aa15.36■□□□□ 0.05
SMAD4-201ENST00000342988 APOBEC4Q8WW27 367 aaKnown RBP15.36■□□□□ 0.05
SMAD4-201ENST00000342988 MMD2Q8IY49 270 aa15.36■□□□□ 0.05
SMAD4-201ENST00000342988 ZFP64Q9NPA5 681 aa15.36■□□□□ 0.05
SMAD4-201ENST00000342988 CACNA1GO43497 2377 aa15.35■□□□□ 0.05
SMAD4-201ENST00000342988 NKX2-6A6NCS4 301 aa15.35■□□□□ 0.05
SMAD4-201ENST00000342988 GOLT1AQ6ZVE7 132 aa15.35■□□□□ 0.05
SMAD4-201ENST00000342988 PHF7Q9BWX1 381 aaPredicted RBP15.35■□□□□ 0.05
SMAD4-201ENST00000342988 SF3B5Q9BWJ5 86 aaKnown RBP15.35■□□□□ 0.05
SMAD4-201ENST00000342988 DNM1P46Q6ZS02 220 aa15.35■□□□□ 0.05
SMAD4-201ENST00000342988 SERGEFQ9UGK8 458 aa15.35■□□□□ 0.05
SMAD4-201ENST00000342988 HELZP42694 1942 aaKnown RBP15.35■□□□□ 0.05
SMAD4-201ENST00000342988 COX6B1P14854 86 aa15.35■□□□□ 0.05
SMAD4-201ENST00000342988 DEFB103AP81534 67 aa15.35■□□□□ 0.05
SMAD4-201ENST00000342988 EML5Q05BV3 1969 aa15.35■□□□□ 0.05
SMAD4-201ENST00000342988 PRR32B1ATL7 298 aa15.35■□□□□ 0.05
SMAD4-201ENST00000342988 NPPCP23582 126 aa15.35■□□□□ 0.05
SMAD4-201ENST00000342988 TMEM202A6NGA9 273 aa15.35■□□□□ 0.05
SMAD4-201ENST00000342988 BGLAPP02818 100 aa15.35■□□□□ 0.05
SMAD4-201ENST00000342988 SSTR5P35346 364 aa15.35■□□□□ 0.05
SMAD4-201ENST00000342988 INO80CQ6PI98 192 aaPredicted RBP15.35■□□□□ 0.05
SMAD4-201ENST00000342988 FAM57AQ8TBR7 257 aa15.35■□□□□ 0.05
SMAD4-201ENST00000342988 PGPEP1LA6NFU8 196 aa15.34■□□□□ 0.05
SMAD4-201ENST00000342988 CTAG1AP78358 180 aa15.34■□□□□ 0.05
SMAD4-201ENST00000342988 GVQW1Q8N7I0 195 aa15.34■□□□□ 0.05
SMAD4-201ENST00000342988 LINC00615Q96LM1 132 aaPredicted RBP15.34■□□□□ 0.05
SMAD4-201ENST00000342988 DLEC1Q9Y238 1755 aa15.34■□□□□ 0.05
SMAD4-201ENST00000342988 IFI27P40305 119 aaPredicted RBP15.34■□□□□ 0.05
SMAD4-201ENST00000342988 DUX3Q96PT4 197 aa15.34■□□□□ 0.05
SMAD4-201ENST00000342988 IGLV3-10A0A075B6K4 115 aa15.34■□□□□ 0.05
SMAD4-201ENST00000342988 C1orf220Q5T0J3 134 aa15.34■□□□□ 0.05
SMAD4-201ENST00000342988 HAPLN4Q86UW8 402 aa15.34■□□□□ 0.05
SMAD4-201ENST00000342988 SPANXDQ9BXN6 97 aa15.34■□□□□ 0.05
SMAD4-201ENST00000342988 A0A1W2PR80 420 aa15.34■□□□□ 0.05
SMAD4-201ENST00000342988 SAA1P0DJI8 122 aaPredicted RBP15.34■□□□□ 0.05
SMAD4-201ENST00000342988 ZNF48Q96MX3 618 aaPredicted RBP15.34■□□□□ 0.05
SMAD4-201ENST00000342988 A0A1B0GTH9 108 aa15.34■□□□□ 0.05
SMAD4-201ENST00000342988 SPRED3Q2MJR0 410 aa15.34■□□□□ 0.05
SMAD4-201ENST00000342988 PUSL1Q8N0Z8 303 aaKnown RBP15.34■□□□□ 0.05
SMAD4-201ENST00000342988 ODAMA1E959 279 aa15.34■□□□□ 0.05
SMAD4-201ENST00000342988 ATP6V0CP27449 155 aa15.34■□□□□ 0.05
SMAD4-201ENST00000342988 A8MWV9 139 aa15.33■□□□□ 0.05
SMAD4-201ENST00000342988 NDUFA2O43678 99 aa15.33■□□□□ 0.05
SMAD4-201ENST00000342988 GCM2O75603 506 aaPredicted RBP15.33■□□□□ 0.05
SMAD4-201ENST00000342988 NDUFA3O95167 84 aa15.33■□□□□ 0.05
SMAD4-201ENST00000342988 TMPRSS3P57727 454 aa15.33■□□□□ 0.05
SMAD4-201ENST00000342988 TOMM40O96008 361 aa15.33■□□□□ 0.04
SMAD4-201ENST00000342988 HCFC1P51610 2035 aa15.33■□□□□ 0.04
SMAD4-201ENST00000342988 THY1P04216 161 aa15.33■□□□□ 0.04
SMAD4-201ENST00000342988 NR2C2APQ86WQ0 139 aa15.33■□□□□ 0.04
SMAD4-201ENST00000342988 JPT2Q9H910 190 aa15.33■□□□□ 0.04
SMAD4-201ENST00000342988 RALGAPA2Q2PPJ7 1873 aa15.33■□□□□ 0.04
SMAD4-201ENST00000342988 IGKV6D-21A0A0A0MT36 114 aa15.33■□□□□ 0.04
SMAD4-201ENST00000342988 TMEM30BQ3MIR4 351 aa15.33■□□□□ 0.04
SMAD4-201ENST00000342988 MRAPQ8TCY5 172 aa15.33■□□□□ 0.04
SMAD4-201ENST00000342988 ATP5IP56385 69 aaPredicted RBP15.33■□□□□ 0.04
SMAD4-201ENST00000342988 ZNF146Q15072 292 aa15.33■□□□□ 0.04
SMAD4-201ENST00000342988 MORN3Q6PF18 240 aaPredicted RBP15.33■□□□□ 0.04
SMAD4-201ENST00000342988 ZNF600Q6ZNG1 722 aa15.33■□□□□ 0.04
SMAD4-201ENST00000342988 RNASEH2CQ8TDP1 164 aaKnown RBP15.33■□□□□ 0.04
SMAD4-201ENST00000342988 NPIPB4C9JG80 1138 aa15.33■□□□□ 0.04
SMAD4-201ENST00000342988 HAX1O00165 279 aa15.33■□□□□ 0.04
SMAD4-201ENST00000342988 ACER2Q5QJU3 275 aa15.33■□□□□ 0.04
SMAD4-201ENST00000342988 M0R2P5 195 aa15.32■□□□□ 0.04
SMAD4-201ENST00000342988 RIMKLAQ8IXN7 391 aa15.32■□□□□ 0.04
SMAD4-201ENST00000342988 EML2O95834 649 aa15.32■□□□□ 0.04
SMAD4-201ENST00000342988 CISD1Q9NZ45 108 aaKnown RBP15.32■□□□□ 0.04
SMAD4-201ENST00000342988 IGHV3-21A0A0B4J1V1 117 aa15.32■□□□□ 0.04
SMAD4-201ENST00000342988 CDIPTO14735 213 aa15.32■□□□□ 0.04
SMAD4-201ENST00000342988 CCL2P13500 99 aa15.32■□□□□ 0.04
SMAD4-201ENST00000342988 CT83Q5H943 113 aa15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms