RNA–Protein interactions for RNA: ENST00000342415.5

SNRNP48-201, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP48, Length 4,173 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-201ENST00000342415 KBTBD11O94819 623 aa10.55□□□□□ -0.72
SNRNP48-201ENST00000342415 CSN3P07498 182 aa10.55□□□□□ -0.72
SNRNP48-201ENST00000342415 ATP5G3P48201 142 aa10.55□□□□□ -0.72
SNRNP48-201ENST00000342415 UCP2P55851 309 aa10.55□□□□□ -0.72
SNRNP48-201ENST00000342415 P2RY6Q15077 328 aa10.55□□□□□ -0.72
SNRNP48-201ENST00000342415 OR8I2Q8N0Y5 310 aa10.55□□□□□ -0.72
SNRNP48-201ENST00000342415 ZADH2Q8N4Q0 377 aa10.55□□□□□ -0.72
SNRNP48-201ENST00000342415 PINLYPA6NC86 204 aa10.54□□□□□ -0.72
SNRNP48-201ENST00000342415 LILRA1O75019 489 aa10.54□□□□□ -0.72
SNRNP48-201ENST00000342415 CNIH1O95406 144 aa10.54□□□□□ -0.72
SNRNP48-201ENST00000342415 ATOH7Q8N100 152 aa10.54□□□□□ -0.72
SNRNP48-201ENST00000342415 ZNF525Q8N782 197 aa10.54□□□□□ -0.72
SNRNP48-201ENST00000342415 PLPPR1Q8TBJ4 325 aa10.54□□□□□ -0.72
SNRNP48-201ENST00000342415 DDA1Q9BW61 102 aa10.54□□□□□ -0.72
SNRNP48-201ENST00000342415 SDF2L1Q9HCN8 221 aa10.54□□□□□ -0.72
SNRNP48-201ENST00000342415 SH2D2AQ9NP31 389 aa10.54□□□□□ -0.72
SNRNP48-201ENST00000342415 SPAARA0A1B0GVQ0 90 aa10.54□□□□□ -0.72
SNRNP48-201ENST00000342415 SP1P08047 785 aa10.54□□□□□ -0.72
SNRNP48-201ENST00000342415 ARL14EPLP0DKL9 152 aa10.54□□□□□ -0.72
SNRNP48-201ENST00000342415 CRYGSP22914 178 aa10.54□□□□□ -0.72
SNRNP48-201ENST00000342415 CTSSP25774 331 aa10.54□□□□□ -0.72
SNRNP48-201ENST00000342415 Q6ZN92 141 aa10.54□□□□□ -0.72
SNRNP48-201ENST00000342415 TCF23Q7RTU1 214 aa10.54□□□□□ -0.72
SNRNP48-201ENST00000342415 CCL17Q92583 94 aa10.54□□□□□ -0.72
SNRNP48-201ENST00000342415 IL36GQ9NZH8 169 aa10.54□□□□□ -0.72
SNRNP48-201ENST00000342415 HELTA6NFD8 242 aa10.54□□□□□ -0.72
SNRNP48-201ENST00000342415 TMPRSS2O15393 492 aa10.54□□□□□ -0.72
SNRNP48-201ENST00000342415 KLF7O75840 302 aaPredicted RBP10.54□□□□□ -0.72
SNRNP48-201ENST00000342415 TMEM50AO95807 157 aa10.54□□□□□ -0.72
SNRNP48-201ENST00000342415 NPY1RP25929 384 aa10.54□□□□□ -0.72
SNRNP48-201ENST00000342415 CASP6P55212 293 aa10.54□□□□□ -0.72
SNRNP48-201ENST00000342415 UBE2L3P68036 154 aaKnown RBP10.54□□□□□ -0.72
SNRNP48-201ENST00000342415 HES1Q14469 280 aa10.54□□□□□ -0.72
SNRNP48-201ENST00000342415 TMEM183BQ1AE95 376 aa10.54□□□□□ -0.72
SNRNP48-201ENST00000342415 TMEM56Q96MV1 263 aa10.54□□□□□ -0.72
SNRNP48-201ENST00000342415 TMEM56-RWDD3S4R434 201 aa10.54□□□□□ -0.72
SNRNP48-201ENST00000342415 ZNF716A6NP11 495 aa10.53□□□□□ -0.72
SNRNP48-201ENST00000342415 OR5P3Q8WZ94 311 aa10.53□□□□□ -0.72
SNRNP48-201ENST00000342415 CORO2AQ92828 525 aa10.53□□□□□ -0.72
SNRNP48-201ENST00000342415 CXXC4Q9H2H0 198 aa10.53□□□□□ -0.72
SNRNP48-201ENST00000342415 C12orf77C9JDV5 145 aa10.53□□□□□ -0.72
SNRNP48-201ENST00000342415 TCTAP57738 103 aa10.53□□□□□ -0.72
SNRNP48-201ENST00000342415 HOXA4Q00056 320 aaPredicted RBP10.53□□□□□ -0.72
SNRNP48-201ENST00000342415 RPEL1Q2QD12 228 aa10.53□□□□□ -0.72
SNRNP48-201ENST00000342415 Q6ZRM9 215 aa10.53□□□□□ -0.72
SNRNP48-201ENST00000342415 C17orf82Q86X59 251 aaPredicted RBP10.53□□□□□ -0.72
SNRNP48-201ENST00000342415 ZNRF1Q8ND25 227 aa10.53□□□□□ -0.72
SNRNP48-201ENST00000342415 TECRQ9NZ01 308 aaKnown RBP10.53□□□□□ -0.72
SNRNP48-201ENST00000342415 CHEK1O14757 476 aa10.53□□□□□ -0.72
SNRNP48-201ENST00000342415 PRDX2P32119 198 aa10.53□□□□□ -0.72
SNRNP48-201ENST00000342415 HLA-DRB5Q30154 266 aa10.53□□□□□ -0.72
SNRNP48-201ENST00000342415 FAM201AQ5SY85 155 aa10.53□□□□□ -0.72
SNRNP48-201ENST00000342415 TRAV24A0A0B4J272 114 aa10.52□□□□□ -0.72
SNRNP48-201ENST00000342415 NAPSAO96009 420 aa10.52□□□□□ -0.72
SNRNP48-201ENST00000342415 CCKARP32238 428 aa10.52□□□□□ -0.72
SNRNP48-201ENST00000342415 RSPO1Q2MKA7 263 aaPredicted RBP10.52□□□□□ -0.72
SNRNP48-201ENST00000342415 LRRC75BQ2VPJ9 315 aa10.52□□□□□ -0.72
SNRNP48-201ENST00000342415 STARD4Q96DR4 205 aa10.52□□□□□ -0.72
SNRNP48-201ENST00000342415 MISP3Q96FF7 219 aa10.52□□□□□ -0.72
SNRNP48-201ENST00000342415 QTRT1Q9BXR0 403 aaKnown RBP10.52□□□□□ -0.72
SNRNP48-201ENST00000342415 LRRC30A6NM36 301 aa10.52□□□□□ -0.73
SNRNP48-201ENST00000342415 HIST1H1BP16401 226 aaKnown RBP10.52□□□□□ -0.73
SNRNP48-201ENST00000342415 RPL23P62829 140 aaKnown RBP10.52□□□□□ -0.73
SNRNP48-201ENST00000342415 RPL39P5Q59GN2 51 aa10.52□□□□□ -0.73
SNRNP48-201ENST00000342415 C20orf204Q6ZNR8 217 aa10.52□□□□□ -0.73
SNRNP48-201ENST00000342415 KLF14Q8TD94 323 aaPredicted RBP10.52□□□□□ -0.73
SNRNP48-201ENST00000342415 C1QTNF5Q9BXJ0 243 aa10.52□□□□□ -0.73
SNRNP48-201ENST00000342415 PILRBQ9UKJ0 227 aa10.52□□□□□ -0.73
SNRNP48-201ENST00000342415 XIRP2A4UGR9 3374 aa10.52□□□□□ -0.73
SNRNP48-201ENST00000342415 PRUNE2Q8WUY3 3088 aa10.52□□□□□ -0.73
SNRNP48-201ENST00000342415 KLK10O43240 276 aa10.52□□□□□ -0.73
SNRNP48-201ENST00000342415 C1QTNF9P0C862 333 aa10.52□□□□□ -0.73
SNRNP48-201ENST00000342415 TMEM183AQ8IXX5 376 aa10.52□□□□□ -0.73
SNRNP48-201ENST00000342415 HIST1H2BLQ99880 126 aa10.52□□□□□ -0.73
SNRNP48-201ENST00000342415 HES4Q9HCC6 221 aa10.52□□□□□ -0.73
SNRNP48-201ENST00000342415 PLSCR2Q9NRY7 297 aa10.52□□□□□ -0.73
SNRNP48-201ENST00000342415 NAGKQ9UJ70 344 aa10.52□□□□□ -0.73
SNRNP48-201ENST00000342415 PIEZO2Q9H5I5 2752 aa10.52□□□□□ -0.73
SNRNP48-201ENST00000342415 LOC102724200A0A096LPH7 203 aaPredicted RBP10.51□□□□□ -0.73
SNRNP48-201ENST00000342415 SERTM2A0A1B0GWG4 89 aa10.51□□□□□ -0.73
SNRNP48-201ENST00000342415 A0A1W2PRD5 423 aa10.51□□□□□ -0.73
SNRNP48-201ENST00000342415 A0A1W2PRF3 423 aa10.51□□□□□ -0.73
SNRNP48-201ENST00000342415 A0A1W2PRM7 423 aa10.51□□□□□ -0.73
SNRNP48-201ENST00000342415 FAM90A10PA6NDY2 464 aa10.51□□□□□ -0.73
SNRNP48-201ENST00000342415 FAM90A18PA6NE21 464 aa10.51□□□□□ -0.73
SNRNP48-201ENST00000342415 FAM90A16PA6NEW6 464 aa10.51□□□□□ -0.73
SNRNP48-201ENST00000342415 FAM90A20PA6NIJ5 464 aa10.51□□□□□ -0.73
SNRNP48-201ENST00000342415 FAM90A8PA6NJQ4 464 aa10.51□□□□□ -0.73
SNRNP48-201ENST00000342415 FAM90A7PA6NKC0 464 aa10.51□□□□□ -0.73
SNRNP48-201ENST00000342415 FAM90A22PA8MWA6 464 aa10.51□□□□□ -0.73
SNRNP48-201ENST00000342415 FAM90A12PA8MX19 464 aa10.51□□□□□ -0.73
SNRNP48-201ENST00000342415 FAM90A5PA8MXJ8 464 aa10.51□□□□□ -0.73
SNRNP48-201ENST00000342415 FAM90A23PA8MXZ1 464 aa10.51□□□□□ -0.73
SNRNP48-201ENST00000342415 PDE6DO43924 150 aa10.51□□□□□ -0.73
SNRNP48-201ENST00000342415 FAM90A15PP0C7V4 464 aa10.51□□□□□ -0.73
SNRNP48-201ENST00000342415 FAM90A13PP0C7W8 464 aa10.51□□□□□ -0.73
SNRNP48-201ENST00000342415 FAM90A14PP0C7W9 464 aa10.51□□□□□ -0.73
SNRNP48-201ENST00000342415 FAM90A24PP0C7X0 464 aa10.51□□□□□ -0.73
SNRNP48-201ENST00000342415 TEPPQ6URK8 271 aa10.51□□□□□ -0.73
SNRNP48-201ENST00000342415 REC114Q7Z4M0 266 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms