RNA–Protein interactions for RNA: ENST00000341697.7

SEMA6C-201, Transcript of semaphorin 6C, humanhuman

TSL 1 (best)

Gene SEMA6C, Length 5,262 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA6C-201ENST00000341697 KLHDC3Q9BQ90 382 aa16.57■□□□□ 0.24
SEMA6C-201ENST00000341697 TRAPPC1Q9Y5R8 145 aa16.57■□□□□ 0.24
SEMA6C-201ENST00000341697 PRR32B1ATL7 298 aa16.57■□□□□ 0.24
SEMA6C-201ENST00000341697 J3QRE1 110 aa16.57■□□□□ 0.24
SEMA6C-201ENST00000341697 PPOXP50336 477 aa16.57■□□□□ 0.24
SEMA6C-201ENST00000341697 FOXG1P55316 489 aaPredicted RBP16.57■□□□□ 0.24
SEMA6C-201ENST00000341697 BSXQ3C1V8 233 aa16.57■□□□□ 0.24
SEMA6C-201ENST00000341697 OR10S1Q8NGN2 331 aa16.57■□□□□ 0.24
SEMA6C-201ENST00000341697 ZNF586Q9NXT0 402 aa16.57■□□□□ 0.24
SEMA6C-201ENST00000341697 IGHV3OR16-10A0A075B7F0 116 aa16.57■□□□□ 0.24
SEMA6C-201ENST00000341697 KBTBD11-OT1A0A1B0GTJ5 212 aa16.57■□□□□ 0.24
SEMA6C-201ENST00000341697 KCNAB3O43448 404 aa16.57■□□□□ 0.24
SEMA6C-201ENST00000341697 CRYGSP22914 178 aa16.57■□□□□ 0.24
SEMA6C-201ENST00000341697 ID1P41134 155 aa16.57■□□□□ 0.24
SEMA6C-201ENST00000341697 RPEL1Q2QD12 228 aa16.57■□□□□ 0.24
SEMA6C-201ENST00000341697 DPM3Q9P2X0 92 aa16.57■□□□□ 0.24
SEMA6C-201ENST00000341697 SLC31A2O15432 143 aa16.56■□□□□ 0.24
SEMA6C-201ENST00000341697 PDE6DO43924 150 aa16.56■□□□□ 0.24
SEMA6C-201ENST00000341697 WNT5AP41221 380 aa16.56■□□□□ 0.24
SEMA6C-201ENST00000341697 FAM103A1Q9BTL3 118 aaKnown RBP16.56■□□□□ 0.24
SEMA6C-201ENST00000341697 HIST1H1EP10412 219 aaKnown RBP16.56■□□□□ 0.24
SEMA6C-201ENST00000341697 RUNX1Q01196 453 aa16.56■□□□□ 0.24
SEMA6C-201ENST00000341697 PAXXQ9BUH6 204 aa16.56■□□□□ 0.24
SEMA6C-201ENST00000341697 NAT8BQ9UHF3 227 aa16.56■□□□□ 0.24
SEMA6C-201ENST00000341697 TCF19Q9Y242 345 aa16.56■□□□□ 0.24
SEMA6C-201ENST00000341697 F5H697 171 aa16.56■□□□□ 0.24
SEMA6C-201ENST00000341697 RPL39P5Q59GN2 51 aa16.56■□□□□ 0.24
SEMA6C-201ENST00000341697 SMAD7O15105 426 aaKnown RBP16.56■□□□□ 0.24
SEMA6C-201ENST00000341697 SPINK4O60575 86 aa16.56■□□□□ 0.24
SEMA6C-201ENST00000341697 WFDC3Q8IUB2 231 aa16.56■□□□□ 0.24
SEMA6C-201ENST00000341697 LINC00052Q96N35 136 aa16.56■□□□□ 0.24
SEMA6C-201ENST00000341697 OR52M1Q8NGK5 317 aa16.55■□□□□ 0.24
SEMA6C-201ENST00000341697 LYRM2Q9NU23 88 aaPredicted RBP16.55■□□□□ 0.24
SEMA6C-201ENST00000341697 ZNF319Q9P2F9 582 aa16.55■□□□□ 0.24
SEMA6C-201ENST00000341697 NABP1Q96AH0 204 aa16.55■□□□□ 0.24
SEMA6C-201ENST00000341697 RBM14Q96PK6 669 aaKnown RBP16.55■□□□□ 0.24
SEMA6C-201ENST00000341697 LINC00869P0C866 280 aa16.55■□□□□ 0.24
SEMA6C-201ENST00000341697 LINC00312Q9Y6C7 94 aa16.55■□□□□ 0.24
SEMA6C-201ENST00000341697 MED12Q93074 2177 aa16.55■□□□□ 0.24
SEMA6C-201ENST00000341697 ANAPC1Q9H1A4 1944 aa16.55■□□□□ 0.24
SEMA6C-201ENST00000341697 RND2P52198 227 aa16.55■□□□□ 0.24
SEMA6C-201ENST00000341697 MFAP4P55083 255 aa16.55■□□□□ 0.24
SEMA6C-201ENST00000341697 EFNB1P98172 346 aa16.55■□□□□ 0.24
SEMA6C-201ENST00000341697 FA2HQ7L5A8 372 aa16.55■□□□□ 0.24
SEMA6C-201ENST00000341697 IGKV1-9A0A0C4DH69 117 aa16.54■□□□□ 0.24
SEMA6C-201ENST00000341697 ZG16O60844 167 aa16.54■□□□□ 0.24
SEMA6C-201ENST00000341697 IGHG3P01860 377 aa16.54■□□□□ 0.24
SEMA6C-201ENST00000341697 VKORC1L1Q8N0U8 176 aa16.54■□□□□ 0.24
SEMA6C-201ENST00000341697 ZNF436-AS1Q8NC38 126 aaPredicted RBP16.54■□□□□ 0.24
SEMA6C-201ENST00000341697 ZNF430Q9H8G1 570 aaPredicted RBP16.54■□□□□ 0.24
SEMA6C-201ENST00000341697 WDR82Q6UXN9 313 aa16.54■□□□□ 0.24
SEMA6C-201ENST00000341697 RTN4RL2Q86UN3 420 aa16.54■□□□□ 0.24
SEMA6C-201ENST00000341697 CHAC2Q8WUX2 184 aa16.54■□□□□ 0.24
SEMA6C-201ENST00000341697 IL36RNQ9UBH0 155 aa16.54■□□□□ 0.24
SEMA6C-201ENST00000341697 HELTA6NFD8 242 aa16.54■□□□□ 0.24
SEMA6C-201ENST00000341697 HSBP1O75506 76 aa16.54■□□□□ 0.24
SEMA6C-201ENST00000341697 FXYD3Q14802 87 aa16.54■□□□□ 0.24
SEMA6C-201ENST00000341697 FAM216AQ8WUB2 273 aa16.54■□□□□ 0.24
SEMA6C-201ENST00000341697 CACNA1GO43497 2377 aa16.54■□□□□ 0.24
SEMA6C-201ENST00000341697 SEC14L6B5MCN3 397 aa16.54■□□□□ 0.24
SEMA6C-201ENST00000341697 CXCL2P19875 107 aa16.54■□□□□ 0.24
SEMA6C-201ENST00000341697 B3GALT5-AS1P59052 145 aa16.54■□□□□ 0.24
SEMA6C-201ENST00000341697 TMEM18Q96B42 140 aa16.54■□□□□ 0.24
SEMA6C-201ENST00000341697 NOTCH4Q99466 2003 aa16.53■□□□□ 0.24
SEMA6C-201ENST00000341697 H1FOOQ8IZA3 346 aaPredicted RBP16.53■□□□□ 0.24
SEMA6C-201ENST00000341697 RSG1Q9BU20 258 aa16.53■□□□□ 0.24
SEMA6C-201ENST00000341697 PLSCR2Q9NRY7 297 aa16.53■□□□□ 0.24
SEMA6C-201ENST00000341697 A0A1W2PS18 150 aa16.53■□□□□ 0.24
SEMA6C-201ENST00000341697 IGSF23A1L1A6 192 aa16.53■□□□□ 0.24
SEMA6C-201ENST00000341697 RAB5AP20339 215 aa16.53■□□□□ 0.24
SEMA6C-201ENST00000341697 ZNF146Q15072 292 aa16.53■□□□□ 0.24
SEMA6C-201ENST00000341697 OR10G8Q8NGN5 311 aa16.53■□□□□ 0.24
SEMA6C-201ENST00000341697 METTL26Q96S19 204 aa16.53■□□□□ 0.24
SEMA6C-201ENST00000341697 TP53RKQ96S44 253 aa16.53■□□□□ 0.24
SEMA6C-201ENST00000341697 DCTN5Q9BTE1 182 aa16.53■□□□□ 0.24
SEMA6C-201ENST00000341697 FBLN5Q9UBX5 448 aa16.53■□□□□ 0.24
SEMA6C-201ENST00000341697 INTS1Q8N201 2190 aaKnown RBP16.53■□□□□ 0.24
SEMA6C-201ENST00000341697 TMEM218A2RU14 115 aa16.53■□□□□ 0.24
SEMA6C-201ENST00000341697 NPIPB11E5RHQ5 1161 aa16.53■□□□□ 0.24
SEMA6C-201ENST00000341697 SRSF10O75494 262 aaKnown RBP16.53■□□□□ 0.24
SEMA6C-201ENST00000341697 OSR1Q8TAX0 266 aaPredicted RBP16.53■□□□□ 0.24
SEMA6C-201ENST00000341697 TRAV30A0A087WSZ9 112 aa16.52■□□□□ 0.24
SEMA6C-201ENST00000341697 RD3LP0DJH9 198 aa16.52■□□□□ 0.24
SEMA6C-201ENST00000341697 COL8A1P27658 744 aa16.52■□□□□ 0.24
SEMA6C-201ENST00000341697 RANP62826 216 aaKnown RBP16.52■□□□□ 0.24
SEMA6C-201ENST00000341697 FAM74A3Q4VXF1 159 aa16.52■□□□□ 0.24
SEMA6C-201ENST00000341697 MRPL30Q8TCC3 161 aaKnown RBP16.52■□□□□ 0.24
SEMA6C-201ENST00000341697 TUBD1Q9UJT1 453 aa16.52■□□□□ 0.24
SEMA6C-201ENST00000341697 P01737 135 aa16.52■□□□□ 0.24
SEMA6C-201ENST00000341697 NBL1P41271 181 aa16.52■□□□□ 0.24
SEMA6C-201ENST00000341697 COL6A6A6NMZ7 2263 aa16.52■□□□□ 0.24
SEMA6C-201ENST00000341697 ZNF318Q5VUA4 2279 aa16.52■□□□□ 0.24
SEMA6C-201ENST00000341697 MBD3L4A6NDZ8 208 aaPredicted RBP16.52■□□□□ 0.23
SEMA6C-201ENST00000341697 MBD3L3A6NE82 208 aaPredicted RBP16.52■□□□□ 0.23
SEMA6C-201ENST00000341697 MBD3L5A6NJ08 208 aaPredicted RBP16.52■□□□□ 0.23
SEMA6C-201ENST00000341697 HKR1P10072 659 aa16.52■□□□□ 0.23
SEMA6C-201ENST00000341697 IZUMO4Q1ZYL8 232 aa16.52■□□□□ 0.23
SEMA6C-201ENST00000341697 ZCCHC24Q8N2G6 241 aaKnown RBP16.52■□□□□ 0.23
SEMA6C-201ENST00000341697 MBD3L2Q8NHZ7 208 aaPredicted RBP16.52■□□□□ 0.23
SEMA6C-201ENST00000341697 NOL4LQ96MY1 436 aaPredicted RBP16.52■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms