RNA–Protein interactions for RNA: ENST00000339865.9

USP47-202, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 2 BASIC

Gene USP47, Length 7,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-202ENST00000339865 C10orf111Q8N326 155 aa11.17□□□□□ -0.62
USP47-202ENST00000339865 TRBV9A0A0B4J1U6 114 aa11.17□□□□□ -0.62
USP47-202ENST00000339865 RPS20P60866 119 aaKnown RBP11.17□□□□□ -0.62
USP47-202ENST00000339865 MRPL52Q86TS9 123 aaKnown RBP11.17□□□□□ -0.62
USP47-202ENST00000339865 VKORC1L1Q8N0U8 176 aa11.17□□□□□ -0.62
USP47-202ENST00000339865 NXT2Q9NPJ8 142 aaKnown RBP11.17□□□□□ -0.62
USP47-202ENST00000339865 ASB5Q8WWX0 329 aa11.17□□□□□ -0.62
USP47-202ENST00000339865 SCGB3A1Q96QR1 104 aa11.17□□□□□ -0.62
USP47-202ENST00000339865 NCKAP5O14513 1909 aa11.17□□□□□ -0.62
USP47-202ENST00000339865 A0A0A6YYD5 115 aa11.17□□□□□ -0.62
USP47-202ENST00000339865 HSPB1P04792 205 aaKnown RBP11.17□□□□□ -0.62
USP47-202ENST00000339865 HOXA5P20719 270 aa11.17□□□□□ -0.62
USP47-202ENST00000339865 FOXA3P55318 350 aaPredicted RBP11.17□□□□□ -0.62
USP47-202ENST00000339865 DIRC2Q96SL1 478 aa11.17□□□□□ -0.62
USP47-202ENST00000339865 CRYBB3P26998 211 aa11.17□□□□□ -0.62
USP47-202ENST00000339865 FAM89BQ8N5H3 189 aa11.17□□□□□ -0.62
USP47-202ENST00000339865 VSTM2LQ96N03 204 aa11.17□□□□□ -0.62
USP47-202ENST00000339865 DUX5Q96PT3 197 aa11.17□□□□□ -0.62
USP47-202ENST00000339865 CICQ96RK0 1608 aaPredicted RBP11.17□□□□□ -0.62
USP47-202ENST00000339865 MON2Q7Z3U7 1717 aa11.16□□□□□ -0.62
USP47-202ENST00000339865 NKX2-8O15522 239 aa11.16□□□□□ -0.62
USP47-202ENST00000339865 CXCL2P19875 107 aa11.16□□□□□ -0.62
USP47-202ENST00000339865 FHITP49789 147 aa11.16□□□□□ -0.62
USP47-202ENST00000339865 TGIF1Q15583 401 aa11.16□□□□□ -0.62
USP47-202ENST00000339865 RPL31P62899 125 aaKnown RBP11.16□□□□□ -0.62
USP47-202ENST00000339865 MPC1Q9Y5U8 109 aa11.16□□□□□ -0.62
USP47-202ENST00000339865 ALX4Q9H161 411 aaPredicted RBP11.16□□□□□ -0.62
USP47-202ENST00000339865 SLC6A13Q9NSD5 602 aa11.16□□□□□ -0.62
USP47-202ENST00000339865 NHP2Q9NX24 153 aaKnown RBP11.16□□□□□ -0.62
USP47-202ENST00000339865 TNFRSF18Q9Y5U5 241 aa11.16□□□□□ -0.62
USP47-202ENST00000339865 EFNB2P52799 333 aa11.16□□□□□ -0.62
USP47-202ENST00000339865 FAM19A2Q8N3H0 131 aa11.16□□□□□ -0.62
USP47-202ENST00000339865 APOBEC4Q8WW27 367 aaKnown RBP11.16□□□□□ -0.62
USP47-202ENST00000339865 TLNRD1Q9H1K6 362 aa11.16□□□□□ -0.62
USP47-202ENST00000339865 GGTLC3B5MD39 225 aa11.16□□□□□ -0.62
USP47-202ENST00000339865 ZIC3O60481 467 aa11.16□□□□□ -0.62
USP47-202ENST00000339865 GHRHP01286 108 aa11.16□□□□□ -0.62
USP47-202ENST00000339865 PAQR9Q6ZVX9 377 aa11.16□□□□□ -0.62
USP47-202ENST00000339865 PDLIM7Q9NR12 457 aa11.16□□□□□ -0.62
USP47-202ENST00000339865 TNFSF18Q9UNG2 199 aa11.16□□□□□ -0.62
USP47-202ENST00000339865 IGKV6D-21A0A0A0MT36 114 aa11.16□□□□□ -0.62
USP47-202ENST00000339865 H3BRM9 83 aa11.16□□□□□ -0.62
USP47-202ENST00000339865 CD1AP06126 327 aa11.16□□□□□ -0.62
USP47-202ENST00000339865 GABRG2P18507 467 aa11.16□□□□□ -0.62
USP47-202ENST00000339865 ATP5J2P56134 94 aa11.16□□□□□ -0.62
USP47-202ENST00000339865 FBLN7Q53RD9 439 aa11.16□□□□□ -0.62
USP47-202ENST00000339865 VN1R2Q8NFZ6 395 aa11.16□□□□□ -0.62
USP47-202ENST00000339865 C7orf66A4D0T2 115 aa11.15□□□□□ -0.62
USP47-202ENST00000339865 K7N7A8 449 aa11.15□□□□□ -0.62
USP47-202ENST00000339865 M0R381 172 aa11.15□□□□□ -0.62
USP47-202ENST00000339865 TNFSF14O43557 240 aa11.15□□□□□ -0.62
USP47-202ENST00000339865 CAPZBP47756 277 aa11.15□□□□□ -0.62
USP47-202ENST00000339865 GLIPR1P48060 266 aa11.15□□□□□ -0.62
USP47-202ENST00000339865 GCM2O75603 506 aaPredicted RBP11.15□□□□□ -0.62
USP47-202ENST00000339865 NSUN5P1Q3KNT7 163 aa11.15□□□□□ -0.62
USP47-202ENST00000339865 OCIAD2Q56VL3 154 aa11.15□□□□□ -0.62
USP47-202ENST00000339865 OR2H1Q9GZK4 316 aa11.15□□□□□ -0.62
USP47-202ENST00000339865 V9GYH0 126 aa11.15□□□□□ -0.62
USP47-202ENST00000339865 TMPRSS3P57727 454 aa11.15□□□□□ -0.62
USP47-202ENST00000339865 A0A0U1RQV5 110 aa11.15□□□□□ -0.62
USP47-202ENST00000339865 REG1AP05451 166 aa11.15□□□□□ -0.62
USP47-202ENST00000339865 SSBP3Q9BWW4 388 aaPredicted RBP11.15□□□□□ -0.62
USP47-202ENST00000339865 ISG15P05161 165 aa11.15□□□□□ -0.62
USP47-202ENST00000339865 DPTQ07507 201 aa11.15□□□□□ -0.62
USP47-202ENST00000339865 SPINK14Q6IE38 97 aa11.15□□□□□ -0.62
USP47-202ENST00000339865 SH3BGRL3Q9H299 93 aa11.15□□□□□ -0.62
USP47-202ENST00000339865 FAM71F2Q6NXP2 309 aa11.15□□□□□ -0.63
USP47-202ENST00000339865 HEXA-AS1Q9H8Q6 139 aa11.15□□□□□ -0.63
USP47-202ENST00000339865 THADAQ6YHU6 1953 aa11.15□□□□□ -0.63
USP47-202ENST00000339865 IGHV3-72A0A0B4J1Y9 119 aa11.14□□□□□ -0.63
USP47-202ENST00000339865 CLDN14O95500 239 aa11.14□□□□□ -0.63
USP47-202ENST00000339865 IGHV3-48P01763 117 aa11.14□□□□□ -0.63
USP47-202ENST00000339865 SRD5A2P31213 254 aa11.14□□□□□ -0.63
USP47-202ENST00000339865 LHX8Q68G74 356 aa11.14□□□□□ -0.63
USP47-202ENST00000339865 GOLT1AQ6ZVE7 132 aa11.14□□□□□ -0.63
USP47-202ENST00000339865 NFAM1Q8NET5 270 aaPredicted RBP11.14□□□□□ -0.63
USP47-202ENST00000339865 ELF5Q9UKW6 265 aaPredicted RBP11.14□□□□□ -0.63
USP47-202ENST00000339865 C1orf122Q6ZSJ8 110 aa11.14□□□□□ -0.63
USP47-202ENST00000339865 THAP10Q9P2Z0 257 aaPredicted RBP11.14□□□□□ -0.63
USP47-202ENST00000339865 MIC13Q5XKP0 118 aa11.14□□□□□ -0.63
USP47-202ENST00000339865 LAMTOR1Q6IAA8 161 aa11.14□□□□□ -0.63
USP47-202ENST00000339865 C16orf47Q6ZP98 133 aaPredicted RBP11.14□□□□□ -0.63
USP47-202ENST00000339865 OR52M1Q8NGK5 317 aa11.14□□□□□ -0.63
USP47-202ENST00000339865 SPSB4Q96A44 273 aa11.14□□□□□ -0.63
USP47-202ENST00000339865 C5orf30Q96GV9 206 aa11.14□□□□□ -0.63
USP47-202ENST00000339865 DCCP43146 1447 aa11.14□□□□□ -0.63
USP47-202ENST00000339865 ACACAQ13085 2346 aa11.14□□□□□ -0.63
USP47-202ENST00000339865 KIAA1549Q9HCM3 1950 aa11.14□□□□□ -0.63
USP47-202ENST00000339865 PGPEP1LA6NFU8 196 aa11.14□□□□□ -0.63
USP47-202ENST00000339865 CEACAM4O75871 244 aa11.14□□□□□ -0.63
USP47-202ENST00000339865 ASB10Q8WXI3 467 aa11.14□□□□□ -0.63
USP47-202ENST00000339865 ATP5LO75964 103 aa11.14□□□□□ -0.63
USP47-202ENST00000339865 CCDC144NLQ6NUI1 221 aa11.14□□□□□ -0.63
USP47-202ENST00000339865 NABP2Q9BQ15 211 aa11.14□□□□□ -0.63
USP47-202ENST00000339865 MRM2Q9UI43 246 aaKnown RBP11.14□□□□□ -0.63
USP47-202ENST00000339865 CYSLTR1Q9Y271 337 aa11.14□□□□□ -0.63
USP47-202ENST00000339865 PTPRQQ9UMZ3 2332 aa11.14□□□□□ -0.63
USP47-202ENST00000339865 TRAV17A0A0B4J275 112 aa11.14□□□□□ -0.63
USP47-202ENST00000339865 A0A1W2PP11 408 aa11.14□□□□□ -0.63
USP47-202ENST00000339865 APOHP02749 345 aaPredicted RBP11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms