RNA–Protein interactions for RNA: ENST00000339488.8

PTCHD4-201, Transcript of patched domain containing 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PTCHD4, Length 2,850 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4-201ENST00000339488 TMEM222Q9H0R3 208 aa8.16□□□□□ -1.1
PTCHD4-201ENST00000339488 AKIRIN1Q9H9L7 192 aaPredicted RBP8.16□□□□□ -1.1
PTCHD4-201ENST00000339488 ST20Q9HBF5 79 aa8.16□□□□□ -1.1
PTCHD4-201ENST00000339488 KIAA1549LQ6ZVL6 1849 aa8.16□□□□□ -1.1
PTCHD4-201ENST00000339488 IL11P20809 199 aa8.16□□□□□ -1.1
PTCHD4-201ENST00000339488 GPR183P32249 361 aa8.16□□□□□ -1.1
PTCHD4-201ENST00000339488 TMPRSS3P57727 454 aa8.16□□□□□ -1.1
PTCHD4-201ENST00000339488 POLR2LP62875 67 aaKnown RBP8.16□□□□□ -1.1
PTCHD4-201ENST00000339488 TCTEX1D4Q5JR98 221 aa8.16□□□□□ -1.1
PTCHD4-201ENST00000339488 CARD17Q5XLA6 110 aa8.16□□□□□ -1.1
PTCHD4-201ENST00000339488 MMD2Q8IY49 270 aa8.16□□□□□ -1.1
PTCHD4-201ENST00000339488 EAF1Q96JC9 268 aaPredicted RBP8.16□□□□□ -1.1
PTCHD4-201ENST00000339488 DEFB118Q96PH6 123 aa8.16□□□□□ -1.1
PTCHD4-201ENST00000339488 OR2A5Q96R48 311 aa8.16□□□□□ -1.1
PTCHD4-201ENST00000339488 ULBP2Q9BZM5 246 aa8.16□□□□□ -1.1
PTCHD4-201ENST00000339488 LINC00470Q9BZP3 86 aa8.16□□□□□ -1.1
PTCHD4-201ENST00000339488 HS3ST3A1Q9Y663 406 aa8.16□□□□□ -1.1
PTCHD4-201ENST00000339488 ESPL1Q14674 2120 aa8.15□□□□□ -1.1
PTCHD4-201ENST00000339488 C9orf118A6NHY6 69 aa8.15□□□□□ -1.1
PTCHD4-201ENST00000339488 C2orf70A6NJV1 201 aa8.15□□□□□ -1.1
PTCHD4-201ENST00000339488 NPBWR2P48146 333 aa8.15□□□□□ -1.1
PTCHD4-201ENST00000339488 RHOBP62745 196 aa8.15□□□□□ -1.1
PTCHD4-201ENST00000339488 ID3Q02535 119 aa8.15□□□□□ -1.1
PTCHD4-201ENST00000339488 LINC00696Q6ZRV3 163 aa8.15□□□□□ -1.1
PTCHD4-201ENST00000339488 C19orf35Q6ZS72 473 aa8.15□□□□□ -1.1
PTCHD4-201ENST00000339488 DTX1Q86Y01 620 aa8.15□□□□□ -1.1
PTCHD4-201ENST00000339488 FER1L6-AS2Q96M78 137 aa8.15□□□□□ -1.1
PTCHD4-201ENST00000339488 PSMG3Q9BT73 122 aaPredicted RBP8.15□□□□□ -1.1
PTCHD4-201ENST00000339488 SSBP4Q9BWG4 385 aaPredicted RBP8.15□□□□□ -1.1
PTCHD4-201ENST00000339488 COMMD5Q9GZQ3 224 aa8.15□□□□□ -1.1
PTCHD4-201ENST00000339488 IL36BQ9NZH7 164 aa8.15□□□□□ -1.1
PTCHD4-201ENST00000339488 FOXI3A8MTJ6 420 aaPredicted RBP8.15□□□□□ -1.11
PTCHD4-201ENST00000339488 B9A039 149 aa8.15□□□□□ -1.11
PTCHD4-201ENST00000339488 CEACAM5P06731 702 aa8.15□□□□□ -1.11
PTCHD4-201ENST00000339488 FTH1P19P0C7X4 201 aa8.15□□□□□ -1.11
PTCHD4-201ENST00000339488 LINC00869P0C866 280 aa8.15□□□□□ -1.11
PTCHD4-201ENST00000339488 HIST1H1EP10412 219 aaKnown RBP8.15□□□□□ -1.11
PTCHD4-201ENST00000339488 SRFP11831 508 aa8.15□□□□□ -1.11
PTCHD4-201ENST00000339488 HMGA1P17096 107 aaKnown RBP8.15□□□□□ -1.11
PTCHD4-201ENST00000339488 AESQ08117 197 aa8.15□□□□□ -1.11
PTCHD4-201ENST00000339488 KIR3DS1Q14943 382 aa8.15□□□□□ -1.11
PTCHD4-201ENST00000339488 KISS1Q15726 138 aa8.15□□□□□ -1.11
PTCHD4-201ENST00000339488 OOSP2Q86WS3 158 aa8.15□□□□□ -1.11
PTCHD4-201ENST00000339488 NANOS1Q8WY41 292 aaKnown RBP8.15□□□□□ -1.11
PTCHD4-201ENST00000339488 TRAV38-1A0A0B4J264 116 aa8.14□□□□□ -1.11
PTCHD4-201ENST00000339488 E9PLN8 166 aa8.14□□□□□ -1.11
PTCHD4-201ENST00000339488 SPRY1O43609 319 aaPredicted RBP8.14□□□□□ -1.11
PTCHD4-201ENST00000339488 GPR75O95800 540 aa8.14□□□□□ -1.11
PTCHD4-201ENST00000339488 TNFP01375 233 aa8.14□□□□□ -1.11
PTCHD4-201ENST00000339488 FCGR2AP12318 317 aa8.14□□□□□ -1.11
PTCHD4-201ENST00000339488 CCL5P13501 91 aa8.14□□□□□ -1.11
PTCHD4-201ENST00000339488 ECI1P42126 302 aa8.14□□□□□ -1.11
PTCHD4-201ENST00000339488 TFF3Q07654 80 aa8.14□□□□□ -1.11
PTCHD4-201ENST00000339488 LRRC75BQ2VPJ9 315 aa8.14□□□□□ -1.11
PTCHD4-201ENST00000339488 CLLU1OSQ5K130 101 aa8.14□□□□□ -1.11
PTCHD4-201ENST00000339488 Q6ZPA2 131 aa8.14□□□□□ -1.11
PTCHD4-201ENST00000339488 Q6ZRM9 215 aa8.14□□□□□ -1.11
PTCHD4-201ENST00000339488 TMEM136Q6ZRR5 245 aa8.14□□□□□ -1.11
PTCHD4-201ENST00000339488 C2orf91Q6ZV80 131 aa8.14□□□□□ -1.11
PTCHD4-201ENST00000339488 VN1R4Q7Z5H5 301 aa8.14□□□□□ -1.11
PTCHD4-201ENST00000339488 TAF15Q92804 592 aaKnown RBP eCLIP8.14□□□□□ -1.113e-8■■■□□ 14.9
PTCHD4-201ENST00000339488 DECR2Q9NUI1 292 aa8.14□□□□□ -1.11
PTCHD4-201ENST00000339488 FBLN5Q9UBX5 448 aa8.14□□□□□ -1.11
PTCHD4-201ENST00000339488 PSMB11A5LHX3 300 aa8.14□□□□□ -1.11
PTCHD4-201ENST00000339488 J3QR06 171 aa8.14□□□□□ -1.11
PTCHD4-201ENST00000339488 K7EMI3 77 aa8.14□□□□□ -1.11
PTCHD4-201ENST00000339488 DXOO77932 396 aaKnown RBP8.14□□□□□ -1.11
PTCHD4-201ENST00000339488 CD24P25063 80 aa8.14□□□□□ -1.11
PTCHD4-201ENST00000339488 WFDC2Q14508 124 aa8.14□□□□□ -1.11
PTCHD4-201ENST00000339488 TBR1Q16650 682 aa8.14□□□□□ -1.11
PTCHD4-201ENST00000339488 VWC2Q2TAL6 325 aa8.14□□□□□ -1.11
PTCHD4-201ENST00000339488 PRICKLE4Q2TBC4 344 aa8.14□□□□□ -1.11
PTCHD4-201ENST00000339488 NMSQ5H8A3 153 aa8.14□□□□□ -1.11
PTCHD4-201ENST00000339488 CRIP3Q6Q6R5 217 aa8.14□□□□□ -1.11
PTCHD4-201ENST00000339488 ZNF818PQ6ZRF7 136 aa8.14□□□□□ -1.11
PTCHD4-201ENST00000339488 SSX8Q7RTT4 187 aa8.14□□□□□ -1.11
PTCHD4-201ENST00000339488 C18orf32Q8TCD1 76 aa8.14□□□□□ -1.11
PTCHD4-201ENST00000339488 ARPC1AQ92747 370 aa8.14□□□□□ -1.11
PTCHD4-201ENST00000339488 SPIN2AQ99865 258 aa8.14□□□□□ -1.11
PTCHD4-201ENST00000339488 SPIN2BQ9BPZ2 258 aa8.14□□□□□ -1.11
PTCHD4-201ENST00000339488 HRASLS2Q9NWW9 162 aa8.14□□□□□ -1.11
PTCHD4-201ENST00000339488 PSENENQ9NZ42 101 aa8.14□□□□□ -1.11
PTCHD4-201ENST00000339488 SLC17A4Q9Y2C5 497 aa8.14□□□□□ -1.11
PTCHD4-201ENST00000339488 OBSL1O75147 1896 aa8.14□□□□□ -1.11
PTCHD4-201ENST00000339488 CD38P28907 300 aa8.13□□□□□ -1.11
PTCHD4-201ENST00000339488 PEBP1P30086 187 aaKnown RBP8.13□□□□□ -1.11
PTCHD4-201ENST00000339488 PTGDSP41222 190 aa8.13□□□□□ -1.11
PTCHD4-201ENST00000339488 RPL8P62917 257 aaKnown RBP8.13□□□□□ -1.11
PTCHD4-201ENST00000339488 TMEM164Q5U3C3 297 aa8.13□□□□□ -1.11
PTCHD4-201ENST00000339488 GAPTQ8N292 157 aa8.13□□□□□ -1.11
PTCHD4-201ENST00000339488 OR8B12Q8NGG6 310 aa8.13□□□□□ -1.11
PTCHD4-201ENST00000339488 OR51H1Q8NH63 302 aa8.13□□□□□ -1.11
PTCHD4-201ENST00000339488 RNASE7Q9H1E1 156 aaKnown RBP8.13□□□□□ -1.11
PTCHD4-201ENST00000339488 METTL7AQ9H8H3 244 aa8.13□□□□□ -1.11
PTCHD4-201ENST00000339488 HS3ST2Q9Y278 367 aa8.13□□□□□ -1.11
PTCHD4-201ENST00000339488 MED12Q93074 2177 aa8.13□□□□□ -1.11
PTCHD4-201ENST00000339488 CTXND1A0A1B0GTU2 59 aa8.13□□□□□ -1.11
PTCHD4-201ENST00000339488 FCGR2BP31994 310 aaPredicted RBP8.13□□□□□ -1.11
PTCHD4-201ENST00000339488 RPL27P61353 136 aaKnown RBP8.13□□□□□ -1.11
PTCHD4-201ENST00000339488 RPL32P62910 135 aaKnown RBP8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms