RNA–Protein interactions for RNA: ENST00000339438.10

CSDE1-202, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 4,006 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-202ENST00000339438 CPT1CQ8TCG5 803 aa4.71□□□□□ -1.66
CSDE1-202ENST00000339438 NAT6Q93015 286 aa4.71□□□□□ -1.66
CSDE1-202ENST00000339438 SFXN3Q9BWM7 321 aa4.71□□□□□ -1.66
CSDE1-202ENST00000339438 WNT10AQ9GZT5 417 aa4.71□□□□□ -1.66
CSDE1-202ENST00000339438 SLC35D1Q9NTN3 355 aa4.71□□□□□ -1.66
CSDE1-202ENST00000339438 ZNF835Q9Y2P0 537 aa4.71□□□□□ -1.66
CSDE1-202ENST00000339438 AQP7P3A6NL99 342 aa4.7□□□□□ -1.66
CSDE1-202ENST00000339438 MS4A18H0YCH9 400 aa4.7□□□□□ -1.66
CSDE1-202ENST00000339438 K7ENP7 123 aa4.7□□□□□ -1.66
CSDE1-202ENST00000339438 MPPED1O15442 326 aa4.7□□□□□ -1.66
CSDE1-202ENST00000339438 ADAM20O43506 726 aa4.7□□□□□ -1.66
CSDE1-202ENST00000339438 IGLL1P15814 213 aa4.7□□□□□ -1.66
CSDE1-202ENST00000339438 OTX1P32242 354 aaPredicted RBP4.7□□□□□ -1.66
CSDE1-202ENST00000339438 GNB1P62873 340 aa4.7□□□□□ -1.66
CSDE1-202ENST00000339438 SERF2P84101 59 aa4.7□□□□□ -1.66
CSDE1-202ENST00000339438 EIF3IQ13347 325 aaKnown RBP4.7□□□□□ -1.66
CSDE1-202ENST00000339438 KISS1Q15726 138 aa4.7□□□□□ -1.66
CSDE1-202ENST00000339438 MS4A18Q3C1V0 323 aa4.7□□□□□ -1.66
CSDE1-202ENST00000339438 SLC35E4Q6ICL7 350 aa4.7□□□□□ -1.66
CSDE1-202ENST00000339438 ACSM6Q6P461 480 aa4.7□□□□□ -1.66
CSDE1-202ENST00000339438 INO80CQ6PI98 192 aaPredicted RBP4.7□□□□□ -1.66
CSDE1-202ENST00000339438 Q8N7P7 452 aa4.7□□□□□ -1.66
CSDE1-202ENST00000339438 NFAM1Q8NET5 270 aaPredicted RBP4.7□□□□□ -1.66
CSDE1-202ENST00000339438 DYRK2Q92630 601 aa4.7□□□□□ -1.66
CSDE1-202ENST00000339438 ZC2HC1AQ96GY0 325 aa4.7□□□□□ -1.66
CSDE1-202ENST00000339438 DERL1Q9BUN8 251 aa4.7□□□□□ -1.66
CSDE1-202ENST00000339438 PROK2Q9HC23 129 aa4.7□□□□□ -1.66
CSDE1-202ENST00000339438 PGPEP1LA6NFU8 196 aa4.7□□□□□ -1.66
CSDE1-202ENST00000339438 NPIPA2E9PIF3 369 aa4.7□□□□□ -1.66
CSDE1-202ENST00000339438 MRPS34P82930 218 aaKnown RBP4.7□□□□□ -1.66
CSDE1-202ENST00000339438 PSG3Q16557 428 aa4.7□□□□□ -1.66
CSDE1-202ENST00000339438 PLPPR5Q32ZL2 321 aa4.7□□□□□ -1.66
CSDE1-202ENST00000339438 RNFT1Q5M7Z0 435 aa4.7□□□□□ -1.66
CSDE1-202ENST00000339438 BVES-AS1Q5T3Y7 98 aa4.7□□□□□ -1.66
CSDE1-202ENST00000339438 AMMECR1LQ6DCA0 310 aa4.7□□□□□ -1.66
CSDE1-202ENST00000339438 DHRS13Q6UX07 377 aa4.7□□□□□ -1.66
CSDE1-202ENST00000339438 IGFBPL1Q8WX77 278 aa4.7□□□□□ -1.66
CSDE1-202ENST00000339438 GMPPAQ96IJ6 420 aaPredicted RBP4.7□□□□□ -1.66
CSDE1-202ENST00000339438 DGAT2Q96PD7 388 aa4.7□□□□□ -1.66
CSDE1-202ENST00000339438 ZNF286AQ9HBT8 521 aa4.7□□□□□ -1.66
CSDE1-202ENST00000339438 NECAP2Q9NVZ3 263 aa4.7□□□□□ -1.66
CSDE1-202ENST00000339438 C2orf72A6NCS6 295 aa4.7□□□□□ -1.66
CSDE1-202ENST00000339438 FCN1O00602 326 aa4.7□□□□□ -1.66
CSDE1-202ENST00000339438 ZNF253O75346 499 aa4.7□□□□□ -1.66
CSDE1-202ENST00000339438 SCRG1O75711 98 aa4.7□□□□□ -1.66
CSDE1-202ENST00000339438 PSG9Q00887 426 aa4.7□□□□□ -1.66
CSDE1-202ENST00000339438 KCNIP4Q6PIL6 250 aa4.7□□□□□ -1.66
CSDE1-202ENST00000339438 MEX3BQ6ZN04 569 aaKnown RBP4.7□□□□□ -1.66
CSDE1-202ENST00000339438 Q6ZRM9 215 aa4.7□□□□□ -1.66
CSDE1-202ENST00000339438 S100A7AQ86SG5 101 aa4.7□□□□□ -1.66
CSDE1-202ENST00000339438 MCEMP1Q8IX19 187 aa4.7□□□□□ -1.66
CSDE1-202ENST00000339438 C10orf53Q8N6V4 93 aa4.7□□□□□ -1.66
CSDE1-202ENST00000339438 TXN2Q99757 166 aa4.7□□□□□ -1.66
CSDE1-202ENST00000339438 MRPL18Q9H0U6 180 aaKnown RBP4.7□□□□□ -1.66
CSDE1-202ENST00000339438 LOC102724200A0A096LPH7 203 aaPredicted RBP4.69□□□□□ -1.66
CSDE1-202ENST00000339438 DPRXA6NFQ7 191 aa4.69□□□□□ -1.66
CSDE1-202ENST00000339438 ZNF878C9JN71 531 aa4.69□□□□□ -1.66
CSDE1-202ENST00000339438 CRISP2P16562 243 aa4.69□□□□□ -1.66
CSDE1-202ENST00000339438 PPP1CBP62140 327 aa4.69□□□□□ -1.66
CSDE1-202ENST00000339438 PAX2Q02962 417 aa4.69□□□□□ -1.66
CSDE1-202ENST00000339438 TMEM108Q6UXF1 575 aa4.69□□□□□ -1.66
CSDE1-202ENST00000339438 BHLHA15Q7RTS1 189 aaPredicted RBP4.69□□□□□ -1.66
CSDE1-202ENST00000339438 PNPLA5Q7Z6Z6 429 aaPredicted RBP4.69□□□□□ -1.66
CSDE1-202ENST00000339438 OR52L2PQ8NGH6 319 aa4.69□□□□□ -1.66
CSDE1-202ENST00000339438 SGMS2Q8NHU3 365 aa4.69□□□□□ -1.66
CSDE1-202ENST00000339438 C16orf52Q8NHV5 167 aa4.69□□□□□ -1.66
CSDE1-202ENST00000339438 DUSP23Q9BVJ7 150 aa4.69□□□□□ -1.66
CSDE1-202ENST00000339438 WDR61Q9GZS3 305 aaKnown RBP4.69□□□□□ -1.66
CSDE1-202ENST00000339438 RYDENQ9NUL5 291 aaKnown RBP4.69□□□□□ -1.66
CSDE1-202ENST00000339438 CA2P00918 260 aa4.69□□□□□ -1.66
CSDE1-202ENST00000339438 FBLP22087 321 aaKnown RBP4.69□□□□□ -1.66
CSDE1-202ENST00000339438 OPRM1P35372 400 aa4.69□□□□□ -1.66
CSDE1-202ENST00000339438 GPR6P46095 362 aaPredicted RBP4.69□□□□□ -1.66
CSDE1-202ENST00000339438 LGALS4P56470 323 aa4.69□□□□□ -1.66
CSDE1-202ENST00000339438 TMEM267Q0VDI3 215 aaPredicted RBP4.69□□□□□ -1.66
CSDE1-202ENST00000339438 FUT7Q11130 342 aa4.69□□□□□ -1.66
CSDE1-202ENST00000339438 TBR1Q16650 682 aa4.69□□□□□ -1.66
CSDE1-202ENST00000339438 MPV17L2Q567V2 206 aa4.69□□□□□ -1.66
CSDE1-202ENST00000339438 PRR27Q6MZM9 219 aa4.69□□□□□ -1.66
CSDE1-202ENST00000339438 IGFL3Q6UXB1 125 aa4.69□□□□□ -1.66
CSDE1-202ENST00000339438 C11orf40Q8WZ69 217 aa4.69□□□□□ -1.66
CSDE1-202ENST00000339438 SFRP2Q96HF1 295 aa4.69□□□□□ -1.66
CSDE1-202ENST00000339438 BTF3L4Q96K17 158 aa4.69□□□□□ -1.66
CSDE1-202ENST00000339438 KCNS1Q96KK3 526 aa4.69□□□□□ -1.66
CSDE1-202ENST00000339438 GPHA2Q96T91 129 aa4.69□□□□□ -1.66
CSDE1-202ENST00000339438 SCNM1Q9BWG6 230 aa4.69□□□□□ -1.66
CSDE1-202ENST00000339438 CLEC7AQ9BXN2 247 aa4.69□□□□□ -1.66
CSDE1-202ENST00000339438 MED13Q9UHV7 2174 aa4.69□□□□□ -1.66
CSDE1-202ENST00000339438 APC2O95996 2303 aa4.69□□□□□ -1.66
CSDE1-202ENST00000339438 TRAV36DV7A0A075B6V5 113 aa4.69□□□□□ -1.66
CSDE1-202ENST00000339438 SPAARA0A1B0GVQ0 90 aa4.69□□□□□ -1.66
CSDE1-202ENST00000339438 C2orf70A6NJV1 201 aa4.69□□□□□ -1.66
CSDE1-202ENST00000339438 FAM166BA8MTA8 275 aa4.69□□□□□ -1.66
CSDE1-202ENST00000339438 K7EN84 100 aa4.69□□□□□ -1.66
CSDE1-202ENST00000339438 K7ERU9 68 aa4.69□□□□□ -1.66
CSDE1-202ENST00000339438 NUDT14O95848 222 aa4.69□□□□□ -1.66
CSDE1-202ENST00000339438 LINC00869P0C866 280 aa4.69□□□□□ -1.66
CSDE1-202ENST00000339438 GATA2P23769 480 aaPredicted RBP4.69□□□□□ -1.66
CSDE1-202ENST00000339438 TIMP3P35625 211 aa4.69□□□□□ -1.66
CSDE1-202ENST00000339438 KRTDAPP60985 99 aa4.69□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms