RNA–Protein interactions for RNA: ENST00000336904.7

SNCA-201, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SNCA, Length 3,041 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-201ENST00000336904 LYNX1P0DP58 116 aa7.33□□□□□ -1.24
SNCA-201ENST00000336904 FGF7P21781 194 aa7.33□□□□□ -1.24
SNCA-201ENST00000336904 CD40P25942 277 aa7.33□□□□□ -1.24
SNCA-201ENST00000336904 BSPH1Q075Z2 132 aa7.33□□□□□ -1.24
SNCA-201ENST00000336904 CATR1Q13166 79 aa7.33□□□□□ -1.24
SNCA-201ENST00000336904 TIMM23BQ5SRD1 257 aa7.33□□□□□ -1.24
SNCA-201ENST00000336904 Q8NA96 180 aa7.33□□□□□ -1.24
SNCA-201ENST00000336904 IGFBPL1Q8WX77 278 aa7.33□□□□□ -1.24
SNCA-201ENST00000336904 CCL17Q92583 94 aa7.33□□□□□ -1.24
SNCA-201ENST00000336904 LSM10Q969L4 123 aaKnown RBP7.33□□□□□ -1.24
SNCA-201ENST00000336904 NDRG3Q9UGV2 375 aa7.33□□□□□ -1.24
SNCA-201ENST00000336904 TRAV38-1A0A0B4J264 116 aa7.32□□□□□ -1.24
SNCA-201ENST00000336904 C1QTNF9BB2RNN3 333 aa7.32□□□□□ -1.24
SNCA-201ENST00000336904 MMP9P14780 707 aa7.32□□□□□ -1.24
SNCA-201ENST00000336904 CCL3L1P16619 93 aa7.32□□□□□ -1.24
SNCA-201ENST00000336904 TAGLN2P37802 199 aaKnown RBP7.32□□□□□ -1.24
SNCA-201ENST00000336904 RAB13P51153 203 aa7.32□□□□□ -1.24
SNCA-201ENST00000336904 UBE2G2P60604 165 aa7.32□□□□□ -1.24
SNCA-201ENST00000336904 HABP2Q14520 560 aaPredicted RBP7.32□□□□□ -1.24
SNCA-201ENST00000336904 RBMS3Q6XE24 437 aaKnown RBP7.32□□□□□ -1.24
SNCA-201ENST00000336904 ZNF429Q86V71 674 aa7.32□□□□□ -1.24
SNCA-201ENST00000336904 RPP25LQ8N5L8 163 aaKnown RBP7.32□□□□□ -1.24
SNCA-201ENST00000336904 CLDND2Q8NHS1 167 aa7.32□□□□□ -1.24
SNCA-201ENST00000336904 GNPNAT1Q96EK6 184 aaPredicted RBP7.32□□□□□ -1.24
SNCA-201ENST00000336904 POM121Q96HA1 1249 aa7.32□□□□□ -1.24
SNCA-201ENST00000336904 SSX3Q99909 188 aa7.32□□□□□ -1.24
SNCA-201ENST00000336904 WDR61Q9GZS3 305 aaKnown RBP7.32□□□□□ -1.24
SNCA-201ENST00000336904 SMCO4Q9NRQ5 59 aa7.32□□□□□ -1.24
SNCA-201ENST00000336904 CALYQ9NYX4 217 aa7.32□□□□□ -1.24
SNCA-201ENST00000336904 TANC2Q9HCD6 1990 aa7.32□□□□□ -1.24
SNCA-201ENST00000336904 MKRN2OSH3BPM6 223 aa7.32□□□□□ -1.24
SNCA-201ENST00000336904 RRHO14718 337 aa7.32□□□□□ -1.24
SNCA-201ENST00000336904 IFNA10P01566 189 aa7.32□□□□□ -1.24
SNCA-201ENST00000336904 DUTP33316 252 aaKnown RBP7.32□□□□□ -1.24
SNCA-201ENST00000336904 RPS23P62266 143 aaKnown RBP7.32□□□□□ -1.24
SNCA-201ENST00000336904 NKX6-1P78426 367 aaPredicted RBP7.32□□□□□ -1.24
SNCA-201ENST00000336904 DLK1P80370 383 aa7.32□□□□□ -1.24
SNCA-201ENST00000336904 SPACA3Q8IXA5 215 aa7.32□□□□□ -1.24
SNCA-201ENST00000336904 NECAP1Q8NC96 275 aa7.32□□□□□ -1.24
SNCA-201ENST00000336904 TAF15Q92804 592 aaKnown RBP eCLIP7.32□□□□□ -1.24
SNCA-201ENST00000336904 RPUSD4Q96CM3 377 aaKnown RBP7.32□□□□□ -1.24
SNCA-201ENST00000336904 PATZ1Q9HBE1 687 aaKnown RBP7.32□□□□□ -1.24
SNCA-201ENST00000336904 ZFHX3Q15911 3703 aa7.31□□□□□ -1.24
SNCA-201ENST00000336904 SAA2-SAA4A0A096LPE2 208 aa7.31□□□□□ -1.24
SNCA-201ENST00000336904 MAP1LC3B2A6NCE7 125 aa7.31□□□□□ -1.24
SNCA-201ENST00000336904 DPRXA6NFQ7 191 aa7.31□□□□□ -1.24
SNCA-201ENST00000336904 DFFBO76075 338 aa7.31□□□□□ -1.24
SNCA-201ENST00000336904 IGHV3-48P01763 117 aa7.31□□□□□ -1.24
SNCA-201ENST00000336904 SAA2P0DJI9 122 aaPredicted RBP7.31□□□□□ -1.24
SNCA-201ENST00000336904 GRNP28799 593 aaKnown RBP7.31□□□□□ -1.24
SNCA-201ENST00000336904 GLRXP35754 106 aa7.31□□□□□ -1.24
SNCA-201ENST00000336904 RAB5CP51148 216 aa7.31□□□□□ -1.24
SNCA-201ENST00000336904 LOXL3P58215 753 aa7.31□□□□□ -1.24
SNCA-201ENST00000336904 EIF4EBP1Q13541 118 aaPredicted RBP7.31□□□□□ -1.24
SNCA-201ENST00000336904 RTP5Q14D33 572 aa7.31□□□□□ -1.24
SNCA-201ENST00000336904 CT45A1Q5HYN5 189 aa7.31□□□□□ -1.24
SNCA-201ENST00000336904 TCF23Q7RTU1 214 aa7.31□□□□□ -1.24
SNCA-201ENST00000336904 MOB3BQ86TA1 216 aa7.31□□□□□ -1.24
SNCA-201ENST00000336904 CT45A3Q8NHU0 189 aa7.31□□□□□ -1.24
SNCA-201ENST00000336904 FAM57AQ8TBR7 257 aa7.31□□□□□ -1.24
SNCA-201ENST00000336904 H1FXQ92522 213 aaKnown RBP7.31□□□□□ -1.24
SNCA-201ENST00000336904 MAP1LC3BQ9GZQ8 125 aa7.31□□□□□ -1.24
SNCA-201ENST00000336904 IFI27L2Q9H2X8 130 aa7.31□□□□□ -1.24
SNCA-201ENST00000336904 CTNNBIP1Q9NSA3 81 aaPredicted RBP7.31□□□□□ -1.24
SNCA-201ENST00000336904 VPS13CQ709C8 3753 aa7.31□□□□□ -1.24
SNCA-201ENST00000336904 TGIF2-C20orf24A0A0A6YYL0 155 aa7.31□□□□□ -1.24
SNCA-201ENST00000336904 RNF212BA8MTL3 300 aa7.31□□□□□ -1.24
SNCA-201ENST00000336904 OR2C1O95371 312 aa7.31□□□□□ -1.24
SNCA-201ENST00000336904 SNRPCP09234 159 aaKnown RBP7.31□□□□□ -1.24
SNCA-201ENST00000336904 OR4A8P0C604 315 aa7.31□□□□□ -1.24
SNCA-201ENST00000336904 APELAP0DMC3 54 aa7.31□□□□□ -1.24
SNCA-201ENST00000336904 HBG1P69891 147 aa7.31□□□□□ -1.24
SNCA-201ENST00000336904 HBG2P69892 147 aa7.31□□□□□ -1.24
SNCA-201ENST00000336904 TLE4Q04727 773 aa7.31□□□□□ -1.24
SNCA-201ENST00000336904 DIAPH2-AS1Q14236 149 aa7.31□□□□□ -1.24
SNCA-201ENST00000336904 LRRC75BQ2VPJ9 315 aa7.31□□□□□ -1.24
SNCA-201ENST00000336904 FFAR4Q5NUL3 377 aa7.31□□□□□ -1.24
SNCA-201ENST00000336904 SSMEM1Q8WWF3 244 aa7.31□□□□□ -1.24
SNCA-201ENST00000336904 LHX4Q969G2 390 aa7.31□□□□□ -1.24
SNCA-201ENST00000336904 HSPB7Q9UBY9 170 aa7.31□□□□□ -1.24
SNCA-201ENST00000336904 PRELID3BQ9Y3B1 194 aa7.31□□□□□ -1.24
SNCA-201ENST00000336904 DSCAML1Q8TD84 2053 aa7.31□□□□□ -1.24
SNCA-201ENST00000336904 MGST3O14880 152 aa7.3□□□□□ -1.24
SNCA-201ENST00000336904 IGKV1-16P04430 117 aa7.3□□□□□ -1.24
SNCA-201ENST00000336904 C17orf58Q2M2W7 97 aa7.3□□□□□ -1.24
SNCA-201ENST00000336904 PDZD11Q5EBL8 140 aa7.3□□□□□ -1.24
SNCA-201ENST00000336904 IGFL3Q6UXB1 125 aa7.3□□□□□ -1.24
SNCA-201ENST00000336904 HEYLQ9NQ87 328 aaPredicted RBP7.3□□□□□ -1.24
SNCA-201ENST00000336904 GFOD1Q9NXC2 390 aa7.3□□□□□ -1.24
SNCA-201ENST00000336904 KIAA1456Q9P272 454 aa7.3□□□□□ -1.24
SNCA-201ENST00000336904 PRRG2O14669 202 aa7.3□□□□□ -1.24
SNCA-201ENST00000336904 FCN3O75636 299 aa7.3□□□□□ -1.24
SNCA-201ENST00000336904 LY6HO94772 140 aa7.3□□□□□ -1.24
SNCA-201ENST00000336904 PLAUP00749 431 aa7.3□□□□□ -1.24
SNCA-201ENST00000336904 THBDP07204 575 aa7.3□□□□□ -1.24
SNCA-201ENST00000336904 CXCL1P09341 107 aa7.3□□□□□ -1.24
SNCA-201ENST00000336904 HOXB1P14653 301 aaPredicted RBP7.3□□□□□ -1.24
SNCA-201ENST00000336904 NQO2P16083 231 aa7.3□□□□□ -1.24
SNCA-201ENST00000336904 HNF1AP20823 631 aa7.3□□□□□ -1.24
SNCA-201ENST00000336904 PAX6P26367 422 aa7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms