RNA–Protein interactions for RNA: ENST00000334389.5

LINC00643-201, long intergenic non-protein coding RNA 643, humanhuman

TSL 2 BASIC

Gene LINC00643, Length 3,247 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00643-201ENST00000334389 TTC23Q5W5X9 447 aa1.02□□□□□ -2.25
LINC00643-201ENST00000334389 LAMTOR1Q6IAA8 161 aa1.02□□□□□ -2.25
LINC00643-201ENST00000334389 RFPL4BQ6ZWI9 263 aa1.02□□□□□ -2.25
LINC00643-201ENST00000334389 ZNF551Q7Z340 670 aaPredicted RBP1.02□□□□□ -2.25
LINC00643-201ENST00000334389 ZNF546Q86UE3 836 aa1.02□□□□□ -2.25
LINC00643-201ENST00000334389 RPP25LQ8N5L8 163 aaKnown RBP1.02□□□□□ -2.25
LINC00643-201ENST00000334389 PARP16Q8N5Y8 322 aa1.02□□□□□ -2.25
LINC00643-201ENST00000334389 ZNF781Q8N8C0 355 aa1.02□□□□□ -2.25
LINC00643-201ENST00000334389 KLHL30-AS1Q8NEE0 82 aa1.02□□□□□ -2.25
LINC00643-201ENST00000334389 OR2G2Q8NGZ5 317 aa1.02□□□□□ -2.25
LINC00643-201ENST00000334389 TEX47Q8TBZ9 253 aa1.02□□□□□ -2.25
LINC00643-201ENST00000334389 RXFP4Q8TDU9 374 aa1.02□□□□□ -2.25
LINC00643-201ENST00000334389 TMEM239Q8WW34 195 aa1.02□□□□□ -2.25
LINC00643-201ENST00000334389 HPSE2Q8WWQ2 592 aa1.02□□□□□ -2.25
LINC00643-201ENST00000334389 OTUB1Q96FW1 271 aaPredicted RBP1.02□□□□□ -2.25
LINC00643-201ENST00000334389 BSCL2Q96G97 398 aaPredicted RBP1.02□□□□□ -2.25
LINC00643-201ENST00000334389 Q96M66 194 aa1.02□□□□□ -2.25
LINC00643-201ENST00000334389 OR52E6Q96RD3 313 aa1.02□□□□□ -2.25
LINC00643-201ENST00000334389 IMMP2LQ96T52 175 aa1.02□□□□□ -2.25
LINC00643-201ENST00000334389 PRRT1Q99946 306 aa1.02□□□□□ -2.25
LINC00643-201ENST00000334389 CHID1Q9BWS9 393 aa1.02□□□□□ -2.25
LINC00643-201ENST00000334389 CSTL1Q9H114 145 aa1.02□□□□□ -2.25
LINC00643-201ENST00000334389 TNFRSF12AQ9NP84 129 aa1.02□□□□□ -2.25
LINC00643-201ENST00000334389 ZCCHC3Q9NUD5 404 aaKnown RBP1.02□□□□□ -2.25
LINC00643-201ENST00000334389 TMEM14BQ9NUH8 114 aa1.02□□□□□ -2.25
LINC00643-201ENST00000334389 ARL8BQ9NVJ2 186 aa1.02□□□□□ -2.25
LINC00643-201ENST00000334389 SH3BGRL2Q9UJC5 107 aa1.02□□□□□ -2.25
LINC00643-201ENST00000334389 IKZF2Q9UKS7 526 aa1.02□□□□□ -2.25
LINC00643-201ENST00000334389 PLAGL1Q9UM63 463 aa1.02□□□□□ -2.25
LINC00643-201ENST00000334389 SLC22A13Q9Y226 551 aa1.02□□□□□ -2.25
LINC00643-201ENST00000334389 MED31Q9Y3C7 131 aa1.02□□□□□ -2.25
LINC00643-201ENST00000334389 MALRD1Q5VYJ5 2156 aa1.02□□□□□ -2.25
LINC00643-201ENST00000334389 LINC00854A0A1B0GVQ3 168 aa1.02□□□□□ -2.25
LINC00643-201ENST00000334389 UNC119BA6NIH7 251 aa1.02□□□□□ -2.25
LINC00643-201ENST00000334389 C2orf70A6NJV1 201 aa1.02□□□□□ -2.25
LINC00643-201ENST00000334389 ZNF736B4DX44 427 aaPredicted RBP1.02□□□□□ -2.25
LINC00643-201ENST00000334389 PTGES3LE9PB15 166 aa1.02□□□□□ -2.25
LINC00643-201ENST00000334389 E9PI62 339 aa1.02□□□□□ -2.25
LINC00643-201ENST00000334389 H3BML4 177 aa1.02□□□□□ -2.25
LINC00643-201ENST00000334389 K7EPK0 472 aa1.02□□□□□ -2.25
LINC00643-201ENST00000334389 SLC17A2O00624 439 aa1.02□□□□□ -2.25
LINC00643-201ENST00000334389 SOX15O60248 233 aa1.02□□□□□ -2.25
LINC00643-201ENST00000334389 NUPR1O60356 82 aa1.02□□□□□ -2.25
LINC00643-201ENST00000334389 ZNF780AO75290 641 aaPredicted RBP1.02□□□□□ -2.25
LINC00643-201ENST00000334389 SPAG7O75391 227 aa1.02□□□□□ -2.25
LINC00643-201ENST00000334389 NRASP01111 189 aa1.02□□□□□ -2.25
LINC00643-201ENST00000334389 SHBGP04278 402 aa1.02□□□□□ -2.25
LINC00643-201ENST00000334389 SPARCP09486 303 aa1.02□□□□□ -2.25
LINC00643-201ENST00000334389 OR2T7P0C7T2 308 aa1.02□□□□□ -2.25
LINC00643-201ENST00000334389 SPART-AS1P0CW21 52 aa1.02□□□□□ -2.25
LINC00643-201ENST00000334389 COX4I1P13073 169 aa1.02□□□□□ -2.25
LINC00643-201ENST00000334389 OSMP13725 252 aa1.02□□□□□ -2.25
LINC00643-201ENST00000334389 CELP19835 753 aa1.02□□□□□ -2.25
LINC00643-201ENST00000334389 ATP6V1B2P21281 511 aa1.02□□□□□ -2.25
LINC00643-201ENST00000334389 UCP1P25874 307 aa1.02□□□□□ -2.25
LINC00643-201ENST00000334389 HTR1FP30939 366 aa1.02□□□□□ -2.25
LINC00643-201ENST00000334389 TPTEP56180 551 aa1.02□□□□□ -2.25
LINC00643-201ENST00000334389 TAS2R41P59536 307 aa1.02□□□□□ -2.25
LINC00643-201ENST00000334389 KRTAP12-2P59991 146 aa1.02□□□□□ -2.25
LINC00643-201ENST00000334389 UBE2KP61086 200 aa1.02□□□□□ -2.25
LINC00643-201ENST00000334389 RPL8P62917 257 aaKnown RBP1.02□□□□□ -2.25
LINC00643-201ENST00000334389 RPL38P63173 70 aaKnown RBP1.02□□□□□ -2.25
LINC00643-201ENST00000334389 SRSF3P84103 164 aaKnown RBP1.02□□□□□ -2.25
LINC00643-201ENST00000334389 DYRK1AQ13627 763 aa1.02□□□□□ -2.25
LINC00643-201ENST00000334389 ZNF846Q147U1 533 aa1.02□□□□□ -2.25
LINC00643-201ENST00000334389 C17orf58Q2M2W7 97 aa1.02□□□□□ -2.25
LINC00643-201ENST00000334389 C12orf74Q32Q52 190 aa1.02□□□□□ -2.25
LINC00643-201ENST00000334389 C1orf100Q5SVJ3 147 aa1.02□□□□□ -2.25
LINC00643-201ENST00000334389 IBA57Q5T440 356 aaKnown RBP1.02□□□□□ -2.25
LINC00643-201ENST00000334389 C6orf183Q5T699 404 aa1.02□□□□□ -2.25
LINC00643-201ENST00000334389 UBE2UQ5VVX9 321 aa1.02□□□□□ -2.25
LINC00643-201ENST00000334389 TPRA1Q86W33 373 aa1.02□□□□□ -2.25
LINC00643-201ENST00000334389 CCDC197Q8NCU1 140 aa1.02□□□□□ -2.25
LINC00643-201ENST00000334389 C19orf18Q8NEA5 215 aa1.02□□□□□ -2.25
LINC00643-201ENST00000334389 OR2T4Q8NH00 348 aa1.02□□□□□ -2.25
LINC00643-201ENST00000334389 OR2T27Q8NH04 317 aa1.02□□□□□ -2.25
LINC00643-201ENST00000334389 DYDC1Q8WWB3 177 aa1.02□□□□□ -2.25
LINC00643-201ENST00000334389 FCGR1BQ92637 280 aa1.02□□□□□ -2.25
LINC00643-201ENST00000334389 FYTTD1Q96QD9 318 aaKnown RBP1.02□□□□□ -2.25
LINC00643-201ENST00000334389 OR4C12Q96R67 309 aa1.02□□□□□ -2.25
LINC00643-201ENST00000334389 RAB40CQ96S21 281 aa1.02□□□□□ -2.25
LINC00643-201ENST00000334389 VRK1Q99986 396 aaPredicted RBP1.02□□□□□ -2.25
LINC00643-201ENST00000334389 CHST6Q9GZX3 395 aa1.02□□□□□ -2.25
LINC00643-201ENST00000334389 OR51M1Q9H341 326 aa1.02□□□□□ -2.25
LINC00643-201ENST00000334389 CAB39LQ9H9S4 337 aa1.02□□□□□ -2.25
LINC00643-201ENST00000334389 CLN6Q9NWW5 311 aa1.02□□□□□ -2.25
LINC00643-201ENST00000334389 NDUFAF4Q9P032 175 aa1.02□□□□□ -2.25
LINC00643-201ENST00000334389 METTL1Q9UBP6 276 aaKnown RBP1.02□□□□□ -2.25
LINC00643-201ENST00000334389 UBQLN2Q9UHD9 624 aa1.02□□□□□ -2.25
LINC00643-201ENST00000334389 COA3Q9Y2R0 106 aaPredicted RBP1.02□□□□□ -2.25
LINC00643-201ENST00000334389 POLR3HQ9Y535 204 aaPredicted RBP1.02□□□□□ -2.25
LINC00643-201ENST00000334389 IGHV7-81A0A0B4J1V7 117 aa1.01□□□□□ -2.25
LINC00643-201ENST00000334389 TRAV1-2A0A0B4J238 106 aa1.01□□□□□ -2.25
LINC00643-201ENST00000334389 ZNF878C9JN71 531 aa1.01□□□□□ -2.25
LINC00643-201ENST00000334389 G3V3Q6 166 aa1.01□□□□□ -2.25
LINC00643-201ENST00000334389 DNASE2O00115 360 aaPredicted RBP1.01□□□□□ -2.25
LINC00643-201ENST00000334389 GPR39O43194 453 aa1.01□□□□□ -2.25
LINC00643-201ENST00000334389 SERPINI2O75830 405 aa1.01□□□□□ -2.25
LINC00643-201ENST00000334389 TNFAIP8O95379 198 aa1.01□□□□□ -2.25
LINC00643-201ENST00000334389 ORM1P02763 201 aa1.01□□□□□ -2.25
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms