RNA–Protein interactions for RNA: ENST00000330943.8

SNX20-202, Transcript of sorting nexin 20, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX20, Length 2,904 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX20-202ENST00000330943 PAM16Q9Y3D7 125 aa12.14□□□□□ -0.47
SNX20-202ENST00000330943 MED12LQ86YW9 2145 aa12.13□□□□□ -0.47
SNX20-202ENST00000330943 USF3Q68DE3 2245 aa12.13□□□□□ -0.47
SNX20-202ENST00000330943 C17orf112F2Z3M2 114 aa12.13□□□□□ -0.47
SNX20-202ENST00000330943 F6UZH7 168 aa12.13□□□□□ -0.47
SNX20-202ENST00000330943 RELQ04864 619 aaPredicted RBP12.13□□□□□ -0.47
SNX20-202ENST00000330943 TMEM204Q9BSN7 226 aa12.13□□□□□ -0.47
SNX20-202ENST00000330943 RYDENQ9NUL5 291 aaKnown RBP12.13□□□□□ -0.47
SNX20-202ENST00000330943 IGHV3-64DA0A0J9YX35 117 aa12.13□□□□□ -0.47
SNX20-202ENST00000330943 SS18L1O75177 396 aaPredicted RBP12.13□□□□□ -0.47
SNX20-202ENST00000330943 SFTPCP11686 197 aa12.13□□□□□ -0.47
SNX20-202ENST00000330943 EPHA8P29322 1005 aaPredicted RBP12.13□□□□□ -0.47
SNX20-202ENST00000330943 UBE2NP61088 152 aaKnown RBP12.13□□□□□ -0.47
SNX20-202ENST00000330943 SPATA46Q5T0L3 261 aa12.13□□□□□ -0.47
SNX20-202ENST00000330943 FAM53AQ6NSI3 398 aaPredicted RBP12.13□□□□□ -0.47
SNX20-202ENST00000330943 TMEM45BQ96B21 275 aa12.13□□□□□ -0.47
SNX20-202ENST00000330943 DEPPQ9NTK1 212 aa12.13□□□□□ -0.47
SNX20-202ENST00000330943 MPC1Q9Y5U8 109 aa12.13□□□□□ -0.47
SNX20-202ENST00000330943 KITLGP21583 273 aa12.12□□□□□ -0.47
SNX20-202ENST00000330943 EDDM3BP56851 147 aa12.12□□□□□ -0.47
SNX20-202ENST00000330943 TPPP2P59282 170 aa12.12□□□□□ -0.47
SNX20-202ENST00000330943 ZXDAP98168 799 aa12.12□□□□□ -0.47
SNX20-202ENST00000330943 TMPRSS7Q7RTY8 843 aa12.12□□□□□ -0.47
SNX20-202ENST00000330943 POM121L2Q96KW2 1035 aa12.12□□□□□ -0.47
SNX20-202ENST00000330943 DUSP23Q9BVJ7 150 aa12.12□□□□□ -0.47
SNX20-202ENST00000330943 TRBV20OR9-2A0A075B6H5 130 aa12.12□□□□□ -0.47
SNX20-202ENST00000330943 J3QT63 122 aa12.12□□□□□ -0.47
SNX20-202ENST00000330943 CBLN1P23435 193 aa12.12□□□□□ -0.47
SNX20-202ENST00000330943 CD82P27701 267 aa12.12□□□□□ -0.47
SNX20-202ENST00000330943 TUSC5Q8IXB3 177 aa12.12□□□□□ -0.47
SNX20-202ENST00000330943 OR2Y1Q8NGV0 311 aa12.12□□□□□ -0.47
SNX20-202ENST00000330943 MIEN1Q9BRT3 115 aa12.12□□□□□ -0.47
SNX20-202ENST00000330943 KCNIP2Q9NS61 270 aa12.12□□□□□ -0.47
SNX20-202ENST00000330943 TP53TG3Q9ULZ0 132 aa12.12□□□□□ -0.47
SNX20-202ENST00000330943 A0A1W2PPV4 95 aa12.11□□□□□ -0.47
SNX20-202ENST00000330943 PINLYPA6NC86 204 aa12.11□□□□□ -0.47
SNX20-202ENST00000330943 CCL4P13236 92 aa12.11□□□□□ -0.47
SNX20-202ENST00000330943 CDKN1AP38936 164 aa12.11□□□□□ -0.47
SNX20-202ENST00000330943 THBS3P49746 956 aa12.11□□□□□ -0.47
SNX20-202ENST00000330943 TPTE2P1Q5T6R2 138 aa12.11□□□□□ -0.47
SNX20-202ENST00000330943 ZNF645Q8N7E2 425 aa12.11□□□□□ -0.47
SNX20-202ENST00000330943 C5orf30Q96GV9 206 aa12.11□□□□□ -0.47
SNX20-202ENST00000330943 HSPB9Q9BQS6 159 aa12.11□□□□□ -0.47
SNX20-202ENST00000330943 PKIBQ9C010 78 aa12.11□□□□□ -0.47
SNX20-202ENST00000330943 YPEL1O60688 119 aa12.11□□□□□ -0.47
SNX20-202ENST00000330943 TNFSF13O75888 250 aa12.11□□□□□ -0.47
SNX20-202ENST00000330943 SERF1AO75920 110 aa12.11□□□□□ -0.47
SNX20-202ENST00000330943 P0C879 139 aa12.11□□□□□ -0.47
SNX20-202ENST00000330943 TNFSF10P50591 281 aa12.11□□□□□ -0.47
SNX20-202ENST00000330943 MCEMP1Q8IX19 187 aa12.11□□□□□ -0.47
SNX20-202ENST00000330943 VN1R17PQ8TDU5 208 aa12.11□□□□□ -0.47
SNX20-202ENST00000330943 YPEL2Q96QA6 119 aa12.11□□□□□ -0.47
SNX20-202ENST00000330943 C20orf144Q9BQM9 153 aa12.11□□□□□ -0.47
SNX20-202ENST00000330943 C17orf98A8MV24 154 aa12.1□□□□□ -0.47
SNX20-202ENST00000330943 SERPINA7P05543 415 aa12.1□□□□□ -0.47
SNX20-202ENST00000330943 RAC2P15153 192 aa12.1□□□□□ -0.47
SNX20-202ENST00000330943 LINC00310P59036 64 aa12.1□□□□□ -0.47
SNX20-202ENST00000330943 PLP2Q04941 152 aa12.1□□□□□ -0.47
SNX20-202ENST00000330943 IL11RAQ14626 422 aa12.1□□□□□ -0.47
SNX20-202ENST00000330943 TMEM183BQ1AE95 376 aa12.1□□□□□ -0.47
SNX20-202ENST00000330943 LYSMD4Q5XG99 296 aa12.1□□□□□ -0.47
SNX20-202ENST00000330943 TEX43Q6ZNM6 134 aa12.1□□□□□ -0.47
SNX20-202ENST00000330943 DIRC2Q96SL1 478 aa12.1□□□□□ -0.47
SNX20-202ENST00000330943 FOLR3P41439 243 aa12.1□□□□□ -0.47
SNX20-202ENST00000330943 GFRA1P56159 465 aa12.1□□□□□ -0.47
SNX20-202ENST00000330943 YPEL3P61236 119 aaPredicted RBP12.1□□□□□ -0.47
SNX20-202ENST00000330943 VWC2Q2TAL6 325 aa12.1□□□□□ -0.47
SNX20-202ENST00000330943 CIB3Q96Q77 187 aaPredicted RBP12.1□□□□□ -0.47
SNX20-202ENST00000330943 VAMP8Q9BV40 100 aa12.1□□□□□ -0.47
SNX20-202ENST00000330943 LINC00470Q9BZP3 86 aa12.1□□□□□ -0.47
SNX20-202ENST00000330943 LPAR2Q9HBW0 351 aa12.1□□□□□ -0.47
SNX20-202ENST00000330943 ATMQ13315 3056 aa12.1□□□□□ -0.47
SNX20-202ENST00000330943 ZFHX2Q9C0A1 2572 aaPredicted RBP12.1□□□□□ -0.47
SNX20-202ENST00000330943 CRISP2P16562 243 aa12.1□□□□□ -0.47
SNX20-202ENST00000330943 SELEP16581 610 aa12.1□□□□□ -0.47
SNX20-202ENST00000330943 BRS3P32247 399 aa12.1□□□□□ -0.47
SNX20-202ENST00000330943 ARSJQ5FYB0 599 aaPredicted RBP12.1□□□□□ -0.47
SNX20-202ENST00000330943 H2BFWTQ7Z2G1 175 aa12.1□□□□□ -0.47
SNX20-202ENST00000330943 Q8N7P7 452 aa12.1□□□□□ -0.47
SNX20-202ENST00000330943 MBNL3Q9NUK0 354 aaKnown RBP12.1□□□□□ -0.47
SNX20-202ENST00000330943 SCO2A0A1W2PP80 73 aa12.09□□□□□ -0.47
SNX20-202ENST00000330943 OTX2P32243 289 aa12.09□□□□□ -0.47
SNX20-202ENST00000330943 CEBPDP49716 269 aaPredicted RBP12.09□□□□□ -0.47
SNX20-202ENST00000330943 LHX2P50458 406 aa12.09□□□□□ -0.47
SNX20-202ENST00000330943 PAFAH1B2P68402 229 aa12.09□□□□□ -0.47
SNX20-202ENST00000330943 ZNF90Q03938 601 aa12.09□□□□□ -0.47
SNX20-202ENST00000330943 CATR1Q13166 79 aa12.09□□□□□ -0.47
SNX20-202ENST00000330943 OR10G8Q8NGN5 311 aa12.09□□□□□ -0.47
SNX20-202ENST00000330943 IGKV3D-15A0A087WSY6 115 aa12.09□□□□□ -0.47
SNX20-202ENST00000330943 NXPH2O95156 264 aa12.09□□□□□ -0.47
SNX20-202ENST00000330943 ARL14EPLP0DKL9 152 aa12.09□□□□□ -0.47
SNX20-202ENST00000330943 TIMP3P35625 211 aa12.09□□□□□ -0.47
SNX20-202ENST00000330943 GAGE1Q13065 139 aa12.09□□□□□ -0.47
SNX20-202ENST00000330943 WDR86Q86TI4 376 aa12.09□□□□□ -0.47
SNX20-202ENST00000330943 MRPL52Q86TS9 123 aaKnown RBP12.09□□□□□ -0.47
SNX20-202ENST00000330943 OR52L2PQ8NGH6 319 aa12.09□□□□□ -0.47
SNX20-202ENST00000330943 MRPL18Q9H0U6 180 aaKnown RBP12.09□□□□□ -0.47
SNX20-202ENST00000330943 CD1BP29016 333 aa12.08□□□□□ -0.48
SNX20-202ENST00000330943 ARR3P36575 388 aa12.08□□□□□ -0.48
SNX20-202ENST00000330943 BRWD1-AS2P59051 145 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms