RNA–Protein interactions for RNA: ENST00000328923.7

SHMT2-201, Transcript of serine hydroxymethyltransferase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHMT2, Length 2,537 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-201ENST00000328923 GP1BBP13224 206 aa10.03□□□□□ -0.8
SHMT2-201ENST00000328923 GABRG2P18507 467 aa10.03□□□□□ -0.8
SHMT2-201ENST00000328923 EBLN2Q6P2I7 272 aa10.03□□□□□ -0.8
SHMT2-201ENST00000328923 CCL4L1Q8NHW4 92 aa10.03□□□□□ -0.8
SHMT2-201ENST00000328923 TSACCQ96A04 125 aaPredicted RBP10.03□□□□□ -0.8
SHMT2-201ENST00000328923 TAAR6Q96RI8 345 aa10.03□□□□□ -0.8
SHMT2-201ENST00000328923 SLC7A10Q9NS82 523 aa10.03□□□□□ -0.8
SHMT2-201ENST00000328923 NPIPA1Q9UND3 350 aa10.03□□□□□ -0.8
SHMT2-201ENST00000328923 FRYLO94915 3013 aa10.03□□□□□ -0.8
SHMT2-201ENST00000328923 MDFIC2A0A1B0GVS7 189 aa10.03□□□□□ -0.8
SHMT2-201ENST00000328923 FRG2CA6NGY1 282 aa10.03□□□□□ -0.8
SHMT2-201ENST00000328923 ZNF850A8MQ14 1090 aa10.03□□□□□ -0.8
SHMT2-201ENST00000328923 H3BUT2 72 aa10.03□□□□□ -0.8
SHMT2-201ENST00000328923 F2RL2O00254 374 aa10.03□□□□□ -0.8
SHMT2-201ENST00000328923 SLC17A3O00476 420 aa10.03□□□□□ -0.8
SHMT2-201ENST00000328923 VDAC1P21796 283 aa10.03□□□□□ -0.8
SHMT2-201ENST00000328923 DAP3P51398 398 aaKnown RBP10.03□□□□□ -0.8
SHMT2-201ENST00000328923 C6orf201Q7Z4U5 140 aa10.03□□□□□ -0.8
SHMT2-201ENST00000328923 PNPLA5Q7Z6Z6 429 aaPredicted RBP10.03□□□□□ -0.8
SHMT2-201ENST00000328923 OR10G3Q8NGC4 313 aa10.03□□□□□ -0.8
SHMT2-201ENST00000328923 PSMG3Q9BT73 122 aaPredicted RBP10.03□□□□□ -0.8
SHMT2-201ENST00000328923 CENPMQ9NSP4 180 aa10.03□□□□□ -0.8
SHMT2-201ENST00000328923 STARD5Q9NSY2 213 aa10.03□□□□□ -0.8
SHMT2-201ENST00000328923 PLEK2Q9NYT0 353 aa10.03□□□□□ -0.8
SHMT2-201ENST00000328923 ANXA10Q9UJ72 324 aa10.03□□□□□ -0.8
SHMT2-201ENST00000328923 CNIH1O95406 144 aa10.02□□□□□ -0.8
SHMT2-201ENST00000328923 CD1BP29016 333 aa10.02□□□□□ -0.8
SHMT2-201ENST00000328923 NPBWR2P48146 333 aa10.02□□□□□ -0.8
SHMT2-201ENST00000328923 NRN1LQ496H8 165 aa10.02□□□□□ -0.8
SHMT2-201ENST00000328923 C9orf135Q5VTT2 229 aa10.02□□□□□ -0.8
SHMT2-201ENST00000328923 SLC25A34Q6PIV7 304 aa10.02□□□□□ -0.8
SHMT2-201ENST00000328923 OR5A2Q8NGI9 324 aa10.02□□□□□ -0.8
SHMT2-201ENST00000328923 KCNK17Q96T54 332 aa10.02□□□□□ -0.8
SHMT2-201ENST00000328923 FAM110AQ9BQ89 295 aa10.02□□□□□ -0.8
SHMT2-201ENST00000328923 TNRC6AQ8NDV7 1962 aaKnown RBP10.02□□□□□ -0.81
SHMT2-201ENST00000328923 TMED7-TICAM2A0A0A6YYA0 188 aa10.02□□□□□ -0.81
SHMT2-201ENST00000328923 hDV102S1A0JD36 115 aa10.02□□□□□ -0.81
SHMT2-201ENST00000328923 MPPED1O15442 326 aa10.02□□□□□ -0.81
SHMT2-201ENST00000328923 PDE6DO43924 150 aa10.02□□□□□ -0.81
SHMT2-201ENST00000328923 TNFP01375 233 aa10.02□□□□□ -0.81
SHMT2-201ENST00000328923 CELA3AP09093 270 aa10.02□□□□□ -0.81
SHMT2-201ENST00000328923 STAG3L2P0CL84 134 aa10.02□□□□□ -0.81
SHMT2-201ENST00000328923 CCL1P22362 96 aa10.02□□□□□ -0.81
SHMT2-201ENST00000328923 UQCRFS1P47985 274 aa10.02□□□□□ -0.81
SHMT2-201ENST00000328923 GNB1P62873 340 aa10.02□□□□□ -0.81
SHMT2-201ENST00000328923 FOXE3Q13461 319 aa10.02□□□□□ -0.81
SHMT2-201ENST00000328923 ACSF3Q4G176 576 aaPredicted RBP10.02□□□□□ -0.81
SHMT2-201ENST00000328923 OR10J3Q5JRS4 329 aa10.02□□□□□ -0.81
SHMT2-201ENST00000328923 C1QL2Q7Z5L3 287 aa10.02□□□□□ -0.81
SHMT2-201ENST00000328923 NAT6Q93015 286 aa10.02□□□□□ -0.81
SHMT2-201ENST00000328923 AP1S3Q96PC3 154 aa10.02□□□□□ -0.81
SHMT2-201ENST00000328923 ST20Q9HBF5 79 aa10.02□□□□□ -0.81
SHMT2-201ENST00000328923 JKAMPQ9P055 326 aa10.02□□□□□ -0.81
SHMT2-201ENST00000328923 ARL2-SNX15V9GYD0 113 aa10.02□□□□□ -0.81
SHMT2-201ENST00000328923 LRP4O75096 1905 aa10.01□□□□□ -0.81
SHMT2-201ENST00000328923 SLC22A20A6NK97 555 aa10.01□□□□□ -0.81
SHMT2-201ENST00000328923 CLDN1O95832 211 aa10.01□□□□□ -0.81
SHMT2-201ENST00000328923 NAPSAO96009 420 aa10.01□□□□□ -0.81
SHMT2-201ENST00000328923 ARL16Q0P5N6 197 aa10.01□□□□□ -0.81
SHMT2-201ENST00000328923 INO80CQ6PI98 192 aaPredicted RBP10.01□□□□□ -0.81
SHMT2-201ENST00000328923 STPG3Q8N7X2 389 aa10.01□□□□□ -0.81
SHMT2-201ENST00000328923 OR2K2Q8NGT1 345 aa10.01□□□□□ -0.81
SHMT2-201ENST00000328923 SFXN3Q9BWM7 321 aa10.01□□□□□ -0.81
SHMT2-201ENST00000328923 LINC00470Q9BZP3 86 aa10.01□□□□□ -0.81
SHMT2-201ENST00000328923 NXF5Q9H1B4 397 aaKnown RBP10.01□□□□□ -0.81
SHMT2-201ENST00000328923 LRP5LA4QPB2 252 aa10.01□□□□□ -0.81
SHMT2-201ENST00000328923 FAM181BA6NEQ2 426 aa10.01□□□□□ -0.81
SHMT2-201ENST00000328923 C11orf94C9JXX5 98 aa10.01□□□□□ -0.81
SHMT2-201ENST00000328923 SPINK4O60575 86 aa10.01□□□□□ -0.81
SHMT2-201ENST00000328923 NDUFB4O95168 129 aa10.01□□□□□ -0.81
SHMT2-201ENST00000328923 SLC25A6P12236 298 aa10.01□□□□□ -0.81
SHMT2-201ENST00000328923 SRIP30626 198 aa10.01□□□□□ -0.81
SHMT2-201ENST00000328923 OOSP2Q86WS3 158 aa10.01□□□□□ -0.81
SHMT2-201ENST00000328923 BOD1L2Q8IYS8 172 aa10.01□□□□□ -0.81
SHMT2-201ENST00000328923 ZNF295-AS1Q8N0V1 137 aa10.01□□□□□ -0.81
SHMT2-201ENST00000328923 KIR3DL3Q8N743 410 aa10.01□□□□□ -0.81
SHMT2-201ENST00000328923 OR51E1Q8TCB6 317 aa10.01□□□□□ -0.81
SHMT2-201ENST00000328923 COMMD5Q9GZQ3 224 aa10.01□□□□□ -0.81
SHMT2-201ENST00000328923 PNRC2Q9NPJ4 139 aaKnown RBP10.01□□□□□ -0.81
SHMT2-201ENST00000328923 NAT8BQ9UHF3 227 aa10.01□□□□□ -0.81
SHMT2-201ENST00000328923 C3orf85A0A1B0GTC6 90 aa10□□□□□ -0.81
SHMT2-201ENST00000328923 C9orf118A6NHY6 69 aa10□□□□□ -0.81
SHMT2-201ENST00000328923 OR11H12B2RN74 326 aa10□□□□□ -0.81
SHMT2-201ENST00000328923 SIVA1O15304 175 aa10□□□□□ -0.81
SHMT2-201ENST00000328923 SRFP11831 508 aa10□□□□□ -0.81
SHMT2-201ENST00000328923 YPEL5P62699 121 aa10□□□□□ -0.81
SHMT2-201ENST00000328923 ID3Q02535 119 aa10□□□□□ -0.81
SHMT2-201ENST00000328923 TBR1Q16650 682 aa10□□□□□ -0.81
SHMT2-201ENST00000328923 DCAF12Q5T6F0 453 aa10□□□□□ -0.81
SHMT2-201ENST00000328923 Q6ZSR6 202 aa10□□□□□ -0.81
SHMT2-201ENST00000328923 ZNF695Q8IW36 515 aa10□□□□□ -0.81
SHMT2-201ENST00000328923 OR11H1Q8NG94 326 aa10□□□□□ -0.81
SHMT2-201ENST00000328923 OR10G8Q8NGN5 311 aa10□□□□□ -0.81
SHMT2-201ENST00000328923 OR11H2Q8NH07 326 aa10□□□□□ -0.81
SHMT2-201ENST00000328923 GPHA2Q96T91 129 aa10□□□□□ -0.81
SHMT2-201ENST00000328923 HRASLS2Q9NWW9 162 aa10□□□□□ -0.81
SHMT2-201ENST00000328923 ARHGEF17Q96PE2 2063 aaPredicted RBP10□□□□□ -0.81
SHMT2-201ENST00000328923 PSMB11A5LHX3 300 aa10□□□□□ -0.81
SHMT2-201ENST00000328923 C10orf142B7Z368 130 aa10□□□□□ -0.81
SHMT2-201ENST00000328923 TMPRSS2O15393 492 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms