RNA–Protein interactions for RNA: ENST00000324340.13

DDX39A-202, Transcript of DExD-box helicase 39A, humanhuman

TSL 1 (best)

Gene DDX39A, Length 1,355 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-202ENST00000324340 CABLES2Q9BTV7 478 aa10.57□□□□□ -0.72
DDX39A-202ENST00000324340 CHODLQ9H9P2 273 aa10.57□□□□□ -0.72
DDX39A-202ENST00000324340 OR2S2Q9NQN1 319 aa10.57□□□□□ -0.72
DDX39A-202ENST00000324340 OR5AC2Q9NZP5 309 aa10.57□□□□□ -0.72
DDX39A-202ENST00000324340 ABCA4P78363 2273 aa10.57□□□□□ -0.72
DDX39A-202ENST00000324340 HRNRQ86YZ3 2850 aaPredicted RBP10.56□□□□□ -0.72
DDX39A-202ENST00000324340 IGKV1-6A0A0C4DH72 117 aa10.56□□□□□ -0.72
DDX39A-202ENST00000324340 ODAMA1E959 279 aa10.56□□□□□ -0.72
DDX39A-202ENST00000324340 TMPRSS2O15393 492 aa10.56□□□□□ -0.72
DDX39A-202ENST00000324340 HIST1H2BKO60814 126 aa10.56□□□□□ -0.72
DDX39A-202ENST00000324340 LY6HO94772 140 aa10.56□□□□□ -0.72
DDX39A-202ENST00000324340 HIST1H2BJP06899 126 aa10.56□□□□□ -0.72
DDX39A-202ENST00000324340 LINC00614P0C842 121 aa10.56□□□□□ -0.72
DDX39A-202ENST00000324340 AKR1C4P17516 323 aa10.56□□□□□ -0.72
DDX39A-202ENST00000324340 HIST1H2BOP23527 126 aa10.56□□□□□ -0.72
DDX39A-202ENST00000324340 HIST1H2BBP33778 126 aa10.56□□□□□ -0.72
DDX39A-202ENST00000324340 TMEM33P57088 247 aa10.56□□□□□ -0.72
DDX39A-202ENST00000324340 HIST1H2BDP58876 126 aa10.56□□□□□ -0.72
DDX39A-202ENST00000324340 HIST1H2BCP62807 126 aa10.56□□□□□ -0.72
DDX39A-202ENST00000324340 GAMTQ14353 236 aa10.56□□□□□ -0.72
DDX39A-202ENST00000324340 HIST2H2BEQ16778 126 aa10.56□□□□□ -0.72
DDX39A-202ENST00000324340 TMEM155Q4W5P6 130 aa10.56□□□□□ -0.72
DDX39A-202ENST00000324340 MIDNQ504T8 468 aa10.56□□□□□ -0.72
DDX39A-202ENST00000324340 KHDC3LQ587J8 217 aa10.56□□□□□ -0.72
DDX39A-202ENST00000324340 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.56□□□□□ -0.72
DDX39A-202ENST00000324340 AADACL3Q5VUY0 350 aa10.56□□□□□ -0.72
DDX39A-202ENST00000324340 TRAT1Q6PIZ9 186 aa10.56□□□□□ -0.72
DDX39A-202ENST00000324340 SLC35E3Q7Z769 313 aa10.56□□□□□ -0.72
DDX39A-202ENST00000324340 ADAD2Q8NCV1 583 aaKnown RBP10.56□□□□□ -0.72
DDX39A-202ENST00000324340 HIST1H2BHQ93079 126 aa10.56□□□□□ -0.72
DDX39A-202ENST00000324340 RHOVQ96L33 236 aa10.56□□□□□ -0.72
DDX39A-202ENST00000324340 HIST1H2BNQ99877 126 aa10.56□□□□□ -0.72
DDX39A-202ENST00000324340 HIST1H2BMQ99879 126 aa10.56□□□□□ -0.72
DDX39A-202ENST00000324340 EIF5A2Q9GZV4 153 aaKnown RBP10.56□□□□□ -0.72
DDX39A-202ENST00000324340 LIME1Q9H400 295 aa10.56□□□□□ -0.72
DDX39A-202ENST00000324340 TRAV39A0A0B4J263 110 aa10.55□□□□□ -0.72
DDX39A-202ENST00000324340 A0A1W2PPE2 198 aa10.55□□□□□ -0.72
DDX39A-202ENST00000324340 DEDDO75618 318 aa10.55□□□□□ -0.72
DDX39A-202ENST00000324340 FCN3O75636 299 aa10.55□□□□□ -0.72
DDX39A-202ENST00000324340 FCGR2CP31995 323 aa10.55□□□□□ -0.72
DDX39A-202ENST00000324340 P2RY1P47900 373 aa10.55□□□□□ -0.72
DDX39A-202ENST00000324340 CAMLGP49069 296 aa10.55□□□□□ -0.72
DDX39A-202ENST00000324340 RAB32Q13637 225 aa10.55□□□□□ -0.72
DDX39A-202ENST00000324340 EDDM3AQ14507 147 aa10.55□□□□□ -0.72
DDX39A-202ENST00000324340 HAGHQ16775 308 aa10.55□□□□□ -0.72
DDX39A-202ENST00000324340 AKIRIN2Q53H80 203 aa10.55□□□□□ -0.72
DDX39A-202ENST00000324340 COA6Q5JTJ3 125 aaKnown RBP10.55□□□□□ -0.72
DDX39A-202ENST00000324340 LYPD2Q6UXB3 125 aa10.55□□□□□ -0.72
DDX39A-202ENST00000324340 CLEC9AQ6UXN8 241 aa10.55□□□□□ -0.72
DDX39A-202ENST00000324340 TPRX1Q8N7U7 411 aa10.55□□□□□ -0.72
DDX39A-202ENST00000324340 OR13A1Q8NGR1 328 aa10.55□□□□□ -0.72
DDX39A-202ENST00000324340 RAB1CQ92928 201 aa10.55□□□□□ -0.72
DDX39A-202ENST00000324340 MISP3Q96FF7 219 aa10.55□□□□□ -0.72
DDX39A-202ENST00000324340 TIMD4Q96H15 378 aa10.55□□□□□ -0.72
DDX39A-202ENST00000324340 PSMG3-AS1Q96PY0 264 aa10.55□□□□□ -0.72
DDX39A-202ENST00000324340 CCL19Q99731 98 aa10.55□□□□□ -0.72
DDX39A-202ENST00000324340 KCNIP1Q9NZI2 227 aa10.55□□□□□ -0.72
DDX39A-202ENST00000324340 CTSZQ9UBR2 303 aa10.55□□□□□ -0.72
DDX39A-202ENST00000324340 FLNCQ14315 2725 aa10.55□□□□□ -0.72
DDX39A-202ENST00000324340 TENM4Q6N022 2769 aa10.55□□□□□ -0.72
DDX39A-202ENST00000324340 MARCH11A6NNE9 402 aa10.54□□□□□ -0.72
DDX39A-202ENST00000324340 C12orf77C9JDV5 145 aa10.54□□□□□ -0.72
DDX39A-202ENST00000324340 E5RGE8 158 aa10.54□□□□□ -0.72
DDX39A-202ENST00000324340 C15orf65H3BRN8 121 aa10.54□□□□□ -0.72
DDX39A-202ENST00000324340 ADAM20O43506 726 aa10.54□□□□□ -0.72
DDX39A-202ENST00000324340 NDUFS7O75251 213 aa10.54□□□□□ -0.72
DDX39A-202ENST00000324340 TUSC2O75896 110 aa10.54□□□□□ -0.72
DDX39A-202ENST00000324340 ARG1P05089 322 aa10.54□□□□□ -0.72
DDX39A-202ENST00000324340 CGB3P0DN86 165 aa10.54□□□□□ -0.72
DDX39A-202ENST00000324340 CGB7P0DN87 165 aa10.54□□□□□ -0.72
DDX39A-202ENST00000324340 GZMHP20718 246 aa10.54□□□□□ -0.72
DDX39A-202ENST00000324340 AKR1C3P42330 323 aa10.54□□□□□ -0.72
DDX39A-202ENST00000324340 RND2P52198 227 aa10.54□□□□□ -0.72
DDX39A-202ENST00000324340 ELOBQ15370 118 aa10.54□□□□□ -0.72
DDX39A-202ENST00000324340 ZNF674Q2M3X9 581 aa10.54□□□□□ -0.72
DDX39A-202ENST00000324340 AKR1C8PQ5T2L2 129 aa10.54□□□□□ -0.72
DDX39A-202ENST00000324340 C5orf24Q7Z6I8 188 aa10.54□□□□□ -0.72
DDX39A-202ENST00000324340 TGIF2LXQ8IUE1 241 aa10.54□□□□□ -0.72
DDX39A-202ENST00000324340 CORO2AQ92828 525 aa10.54□□□□□ -0.72
DDX39A-202ENST00000324340 TMEM230Q96A57 120 aa10.54□□□□□ -0.72
DDX39A-202ENST00000324340 ZNF2Q9BSG1 426 aaPredicted RBP10.54□□□□□ -0.72
DDX39A-202ENST00000324340 OR6C3Q9NZP0 311 aa10.54□□□□□ -0.72
DDX39A-202ENST00000324340 SLC25A10Q9UBX3 287 aaPredicted RBP10.54□□□□□ -0.72
DDX39A-202ENST00000324340 FBXL17Q9UF56 701 aa10.54□□□□□ -0.72
DDX39A-202ENST00000324340 NSG2Q9Y328 171 aa10.54□□□□□ -0.72
DDX39A-202ENST00000324340 AGPAT2O15120 278 aa10.53□□□□□ -0.72
DDX39A-202ENST00000324340 NDUFB3O43676 98 aa10.53□□□□□ -0.72
DDX39A-202ENST00000324340 GPR137BO60478 399 aa10.53□□□□□ -0.72
DDX39A-202ENST00000324340 IFNA21P01568 189 aa10.53□□□□□ -0.72
DDX39A-202ENST00000324340 IGHV4-39P01824 125 aa10.53□□□□□ -0.72
DDX39A-202ENST00000324340 HSPB1P04792 205 aaKnown RBP10.53□□□□□ -0.72
DDX39A-202ENST00000324340 UCP3P55916 312 aa10.53□□□□□ -0.72
DDX39A-202ENST00000324340 EDDM3BP56851 147 aa10.53□□□□□ -0.72
DDX39A-202ENST00000324340 MEF2CQ06413 473 aaPredicted RBP10.53□□□□□ -0.72
DDX39A-202ENST00000324340 TNFRSF9Q07011 255 aa10.53□□□□□ -0.72
DDX39A-202ENST00000324340 PNRC1Q12796 327 aaPredicted RBP10.53□□□□□ -0.72
DDX39A-202ENST00000324340 LRRC10Q5BKY1 277 aa10.53□□□□□ -0.72
DDX39A-202ENST00000324340 SPNS3Q6ZMD2 512 aa10.53□□□□□ -0.72
DDX39A-202ENST00000324340 H1FOOQ8IZA3 346 aaPredicted RBP10.53□□□□□ -0.72
DDX39A-202ENST00000324340 MARCH1Q8TCQ1 289 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 151.2 ms