RNA–Protein interactions for RNA: ENST00000322213.8

SMC1A-201, Transcript of structural maintenance of chromosomes 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC1A, Length 9,784 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-201ENST00000322213 ZNF256Q9Y2P7 627 aaPredicted RBP6.11□□□□□ -1.43
SMC1A-201ENST00000322213 M0QZ24 198 aa6.11□□□□□ -1.43
SMC1A-201ENST00000322213 FCGR3BO75015 233 aa6.11□□□□□ -1.43
SMC1A-201ENST00000322213 MST1P26927 711 aa6.11□□□□□ -1.43
SMC1A-201ENST00000322213 RTP5Q14D33 572 aa6.11□□□□□ -1.43
SMC1A-201ENST00000322213 LIPT2A6NK58 231 aa6.1□□□□□ -1.43
SMC1A-201ENST00000322213 CDIPTO14735 213 aa6.1□□□□□ -1.43
SMC1A-201ENST00000322213 IGFBP4P22692 258 aa6.1□□□□□ -1.43
SMC1A-201ENST00000322213 RHBDD2Q6NTF9 364 aa6.1□□□□□ -1.43
SMC1A-201ENST00000322213 AKIRIN1Q9H9L7 192 aaPredicted RBP6.1□□□□□ -1.43
SMC1A-201ENST00000322213 LOC389332A0A1B0GUA5 103 aa6.1□□□□□ -1.43
SMC1A-201ENST00000322213 IGFBP6P24592 240 aaPredicted RBP6.1□□□□□ -1.43
SMC1A-201ENST00000322213 UCP3P55916 312 aa6.1□□□□□ -1.43
SMC1A-201ENST00000322213 HYAL1Q12794 435 aa6.1□□□□□ -1.43
SMC1A-201ENST00000322213 PQLC2Q6ZP29 291 aa6.1□□□□□ -1.43
SMC1A-201ENST00000322213 NRN1Q9NPD7 142 aa6.1□□□□□ -1.43
SMC1A-201ENST00000322213 CLN8Q9UBY8 286 aa6.1□□□□□ -1.43
SMC1A-201ENST00000322213 OR51B2Q9Y5P1 312 aa6.1□□□□□ -1.43
SMC1A-201ENST00000322213 TRAV30A0A087WSZ9 112 aa6.1□□□□□ -1.43
SMC1A-201ENST00000322213 RSPO2Q6UXX9 243 aaPredicted RBP6.1□□□□□ -1.43
SMC1A-201ENST00000322213 SELENOHQ8IZQ5 122 aaKnown RBP6.1□□□□□ -1.43
SMC1A-201ENST00000322213 OR10D3Q8NH80 312 aa6.1□□□□□ -1.43
SMC1A-201ENST00000322213 COPS9Q8WXC6 57 aa6.1□□□□□ -1.43
SMC1A-201ENST00000322213 RTBDNQ9BSG5 229 aaPredicted RBP6.1□□□□□ -1.43
SMC1A-201ENST00000322213 SDF2L1Q9HCN8 221 aa6.1□□□□□ -1.43
SMC1A-201ENST00000322213 SPCS1Q9Y6A9 102 aa6.1□□□□□ -1.43
SMC1A-201ENST00000322213 IL4P05112 153 aa6.1□□□□□ -1.43
SMC1A-201ENST00000322213 RPS16P62249 146 aaKnown RBP6.1□□□□□ -1.43
SMC1A-201ENST00000322213 HIST1H1AQ02539 215 aaPredicted RBP6.1□□□□□ -1.43
SMC1A-201ENST00000322213 CENPWQ5EE01 88 aa6.1□□□□□ -1.43
SMC1A-201ENST00000322213 HDHD3Q9BSH5 251 aaPredicted RBP6.1□□□□□ -1.43
SMC1A-201ENST00000322213 C12orf49Q9H741 205 aa6.1□□□□□ -1.43
SMC1A-201ENST00000322213 PIN1P1O15428 100 aa6.1□□□□□ -1.43
SMC1A-201ENST00000322213 CST9Q5W186 159 aa6.1□□□□□ -1.43
SMC1A-201ENST00000322213 LIN28BQ6ZN17 250 aaKnown RBP eCLIP6.1□□□□□ -1.437e-7■■■■□ 25.1
SMC1A-201ENST00000322213 OR1L1Q8NH94 360 aa6.1□□□□□ -1.43
SMC1A-201ENST00000322213 WFDC6Q9BQY6 131 aa6.1□□□□□ -1.43
SMC1A-201ENST00000322213 PSG11Q9UQ72 335 aa6.1□□□□□ -1.43
SMC1A-201ENST00000322213 TRAV38-1A0A0B4J264 116 aa6.1□□□□□ -1.43
SMC1A-201ENST00000322213 CA11O75493 328 aa6.1□□□□□ -1.43
SMC1A-201ENST00000322213 CXCL1P09341 107 aa6.1□□□□□ -1.43
SMC1A-201ENST00000322213 CT62P0C5K7 136 aa6.1□□□□□ -1.43
SMC1A-201ENST00000322213 SCGB1A1P11684 91 aa6.1□□□□□ -1.43
SMC1A-201ENST00000322213 ZNF414Q96IQ9 312 aa6.1□□□□□ -1.43
SMC1A-201ENST00000322213 C20orf144Q9BQM9 153 aa6.1□□□□□ -1.43
SMC1A-201ENST00000322213 NPCDR1Q9BY65 106 aa6.1□□□□□ -1.43
SMC1A-201ENST00000322213 OBP2AQ9NY56 170 aa6.1□□□□□ -1.43
SMC1A-201ENST00000322213 C7orf71A4D174 169 aa6.1□□□□□ -1.43
SMC1A-201ENST00000322213 MSGN1A6NI15 193 aa6.1□□□□□ -1.43
SMC1A-201ENST00000322213 BGLAPP02818 100 aa6.1□□□□□ -1.43
SMC1A-201ENST00000322213 CEACAM5P06731 702 aa6.1□□□□□ -1.43
SMC1A-201ENST00000322213 PSG6Q00889 435 aa6.1□□□□□ -1.43
SMC1A-201ENST00000322213 IL23AQ9NPF7 189 aa6.1□□□□□ -1.43
SMC1A-201ENST00000322213 CCL28Q9NRJ3 127 aa6.1□□□□□ -1.43
SMC1A-201ENST00000322213 PRNDQ9UKY0 176 aa6.1□□□□□ -1.43
SMC1A-201ENST00000322213 F11RQ9Y624 299 aaKnown RBP6.1□□□□□ -1.43
SMC1A-201ENST00000322213 NRG2O14511 850 aaPredicted RBP6.1□□□□□ -1.43
SMC1A-201ENST00000322213 NGFP01138 241 aa6.1□□□□□ -1.43
SMC1A-201ENST00000322213 MAS1LP35410 378 aa6.1□□□□□ -1.43
SMC1A-201ENST00000322213 AGMATQ9BSE5 352 aa6.1□□□□□ -1.43
SMC1A-201ENST00000322213 IGHV3-9P01782 118 aa6.09□□□□□ -1.43
SMC1A-201ENST00000322213 FAM169BQ8N8A8 192 aa6.09□□□□□ -1.43
SMC1A-201ENST00000322213 WDR31Q8NA23 367 aa6.09□□□□□ -1.43
SMC1A-201ENST00000322213 NEUROG1Q92886 237 aa6.09□□□□□ -1.43
SMC1A-201ENST00000322213 RTN4RQ9BZR6 473 aa6.09□□□□□ -1.43
SMC1A-201ENST00000322213 FGF21Q9NSA1 209 aa6.09□□□□□ -1.43
SMC1A-201ENST00000322213 ZXDAP98168 799 aa6.09□□□□□ -1.43
SMC1A-201ENST00000322213 RNPS1Q15287 305 aaKnown RBP6.09□□□□□ -1.43
SMC1A-201ENST00000322213 TEX29Q8N6K0 151 aa6.09□□□□□ -1.43
SMC1A-201ENST00000322213 APOBEC4Q8WW27 367 aaKnown RBP6.09□□□□□ -1.43
SMC1A-201ENST00000322213 NPIPB13A6NJU9 1138 aa6.09□□□□□ -1.43
SMC1A-201ENST00000322213 NPIPB4C9JG80 1138 aa6.09□□□□□ -1.43
SMC1A-201ENST00000322213 M0R3E3 92 aa6.09□□□□□ -1.43
SMC1A-201ENST00000322213 TNFSF14O43557 240 aa6.09□□□□□ -1.43
SMC1A-201ENST00000322213 TSPAN13O95857 204 aa6.09□□□□□ -1.43
SMC1A-201ENST00000322213 GPR146Q96CH1 333 aa6.09□□□□□ -1.43
SMC1A-201ENST00000322213 OR8B2Q96RD0 313 aa6.09□□□□□ -1.43
SMC1A-201ENST00000322213 GABRG3Q99928 467 aa6.09□□□□□ -1.43
SMC1A-201ENST00000322213 NPVFQ9HCQ7 196 aa6.09□□□□□ -1.43
SMC1A-201ENST00000322213 IL36GQ9NZH8 169 aa6.09□□□□□ -1.43
SMC1A-201ENST00000322213 TMEM262E9PQX1 116 aa6.09□□□□□ -1.43
SMC1A-201ENST00000322213 APOMO95445 188 aa6.09□□□□□ -1.43
SMC1A-201ENST00000322213 NGFRP08138 427 aa6.09□□□□□ -1.43
SMC1A-201ENST00000322213 CBLN3Q6UW01 205 aa6.09□□□□□ -1.43
SMC1A-201ENST00000322213 C5orf17Q8NAS9 161 aa6.09□□□□□ -1.43
SMC1A-201ENST00000322213 NFAM1Q8NET5 270 aaPredicted RBP6.09□□□□□ -1.43
SMC1A-201ENST00000322213 Q96M66 194 aa6.09□□□□□ -1.43
SMC1A-201ENST00000322213 ATP23Q9Y6H3 246 aa6.09□□□□□ -1.43
SMC1A-201ENST00000322213 ADMP35318 185 aa6.09□□□□□ -1.43
SMC1A-201ENST00000322213 WNT5AP41221 380 aa6.09□□□□□ -1.43
SMC1A-201ENST00000322213 LDLRAD1Q5T700 205 aa6.09□□□□□ -1.43
SMC1A-201ENST00000322213 SNRNP40Q96DI7 357 aaKnown RBP6.09□□□□□ -1.43
SMC1A-201ENST00000322213 PAXXQ9BUH6 204 aa6.09□□□□□ -1.43
SMC1A-201ENST00000322213 OR1D5P58170 312 aa6.09□□□□□ -1.43
SMC1A-201ENST00000322213 FNDC7Q5VTL7 733 aa6.09□□□□□ -1.43
SMC1A-201ENST00000322213 ABHD3Q8WU67 409 aa6.09□□□□□ -1.43
SMC1A-201ENST00000322213 FAM181BA6NEQ2 426 aa6.09□□□□□ -1.44
SMC1A-201ENST00000322213 OTX1P32242 354 aaPredicted RBP6.09□□□□□ -1.44
SMC1A-201ENST00000322213 DCAF12Q5T6F0 453 aa6.09□□□□□ -1.44
SMC1A-201ENST00000322213 C10orf126Q8N4M7 172 aa6.09□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms