RNA–Protein interactions for RNA: ENST00000318266.9

PTPRA-202, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRA, Length 3,219 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-202ENST00000318266 IGHEP01854 428 aa8.12□□□□□ -1.11
PTPRA-202ENST00000318266 FAM90A15PP0C7V4 464 aa8.12□□□□□ -1.11
PTPRA-202ENST00000318266 FAM90A13PP0C7W8 464 aa8.12□□□□□ -1.11
PTPRA-202ENST00000318266 FAM90A14PP0C7W9 464 aa8.12□□□□□ -1.11
PTPRA-202ENST00000318266 FAM90A24PP0C7X0 464 aa8.12□□□□□ -1.11
PTPRA-202ENST00000318266 ARF1P84077 181 aaKnown RBP8.12□□□□□ -1.11
PTPRA-202ENST00000318266 TRIM61Q5EBN2 209 aa8.12□□□□□ -1.11
PTPRA-202ENST00000318266 FAM58AQ8N1B3 248 aa8.12□□□□□ -1.11
PTPRA-202ENST00000318266 STPG4Q8N801 248 aa8.12□□□□□ -1.11
PTPRA-202ENST00000318266 CADM4Q8NFZ8 388 aa8.12□□□□□ -1.11
PTPRA-202ENST00000318266 OCC1Q8TAD7 63 aa8.12□□□□□ -1.11
PTPRA-202ENST00000318266 RNASE8Q8TDE3 154 aaKnown RBP8.12□□□□□ -1.11
PTPRA-202ENST00000318266 PLPPR2Q96GM1 343 aa8.12□□□□□ -1.11
PTPRA-202ENST00000318266 C1QTNF5Q9BXJ0 243 aa8.12□□□□□ -1.11
PTPRA-202ENST00000318266 WNT10AQ9GZT5 417 aa8.12□□□□□ -1.11
PTPRA-202ENST00000318266 DEPPQ9NTK1 212 aa8.12□□□□□ -1.11
PTPRA-202ENST00000318266 FBXL7Q9UJT9 491 aa8.12□□□□□ -1.11
PTPRA-202ENST00000318266 ZNF503-AS2A6NEH8 195 aa8.12□□□□□ -1.11
PTPRA-202ENST00000318266 SNURFLB1AK76 121 aa8.12□□□□□ -1.11
PTPRA-202ENST00000318266 CEBPDP49716 269 aaPredicted RBP8.12□□□□□ -1.11
PTPRA-202ENST00000318266 LHX2P50458 406 aa8.12□□□□□ -1.11
PTPRA-202ENST00000318266 RPL30P62888 115 aaKnown RBP8.12□□□□□ -1.11
PTPRA-202ENST00000318266 KRTCAP3Q53RY4 240 aa8.12□□□□□ -1.11
PTPRA-202ENST00000318266 CARFQ8N187 725 aa8.12□□□□□ -1.11
PTPRA-202ENST00000318266 SIGLECL1Q8N7X8 197 aa8.12□□□□□ -1.11
PTPRA-202ENST00000318266 OR10G8Q8NGN5 311 aa8.12□□□□□ -1.11
PTPRA-202ENST00000318266 APOBEC3DQ96AK3 386 aaPredicted RBP8.12□□□□□ -1.11
PTPRA-202ENST00000318266 OR2D2Q9H210 308 aa8.12□□□□□ -1.11
PTPRA-202ENST00000318266 DOCK10Q96BY6 2186 aa8.12□□□□□ -1.11
PTPRA-202ENST00000318266 DIRC3C9JPN6 131 aa8.11□□□□□ -1.11
PTPRA-202ENST00000318266 ARL14EPLP0DKL9 152 aa8.11□□□□□ -1.11
PTPRA-202ENST00000318266 SSR4P51571 173 aa8.11□□□□□ -1.11
PTPRA-202ENST00000318266 UBE2NP61088 152 aaKnown RBP8.11□□□□□ -1.11
PTPRA-202ENST00000318266 PCOLCEQ15113 449 aa8.11□□□□□ -1.11
PTPRA-202ENST00000318266 Q6ZN92 141 aa8.11□□□□□ -1.11
PTPRA-202ENST00000318266 ERASQ7Z444 233 aa8.11□□□□□ -1.11
PTPRA-202ENST00000318266 MED12LQ86YW9 2145 aa8.11□□□□□ -1.11
PTPRA-202ENST00000318266 OR1L6Q8NGR2 347 aa8.11□□□□□ -1.11
PTPRA-202ENST00000318266 IFI44Q8TCB0 444 aa8.11□□□□□ -1.11
PTPRA-202ENST00000318266 TECTBQ96PL2 329 aa8.11□□□□□ -1.11
PTPRA-202ENST00000318266 OCIAD1Q9NX40 245 aa8.11□□□□□ -1.11
PTPRA-202ENST00000318266 TIMM9Q9Y5J7 89 aa8.11□□□□□ -1.11
PTPRA-202ENST00000318266 DMDP11532 3685 aa8.11□□□□□ -1.11
PTPRA-202ENST00000318266 ZDBF2Q9HCK1 2354 aa8.11□□□□□ -1.11
PTPRA-202ENST00000318266 AMTP48728 403 aa8.11□□□□□ -1.11
PTPRA-202ENST00000318266 PTTG1IPP53801 180 aa8.11□□□□□ -1.11
PTPRA-202ENST00000318266 SPATA45Q537H7 98 aa8.11□□□□□ -1.11
PTPRA-202ENST00000318266 SLC35E1Q96K37 410 aa8.11□□□□□ -1.11
PTPRA-202ENST00000318266 ASCL3Q9NQ33 180 aa8.11□□□□□ -1.11
PTPRA-202ENST00000318266 ZFP30Q9Y2G7 519 aa8.11□□□□□ -1.11
PTPRA-202ENST00000318266 C20orf202A1L168 122 aa8.1□□□□□ -1.11
PTPRA-202ENST00000318266 SYNGR4O95473 234 aa8.1□□□□□ -1.11
PTPRA-202ENST00000318266 TFF1P04155 84 aa8.1□□□□□ -1.11
PTPRA-202ENST00000318266 OR5G3P0C626 314 aa8.1□□□□□ -1.11
PTPRA-202ENST00000318266 TCL1AP56279 114 aa8.1□□□□□ -1.11
PTPRA-202ENST00000318266 RPP30P78346 268 aaKnown RBP8.1□□□□□ -1.11
PTPRA-202ENST00000318266 FOXL1Q12952 345 aa8.1□□□□□ -1.11
PTPRA-202ENST00000318266 WDR74Q6RFH5 385 aaPredicted RBP8.1□□□□□ -1.11
PTPRA-202ENST00000318266 TIPARPQ7Z3E1 657 aaKnown RBP8.1□□□□□ -1.11
PTPRA-202ENST00000318266 C1orf210Q8IVY1 113 aa8.1□□□□□ -1.11
PTPRA-202ENST00000318266 Q8NFD4 153 aa8.1□□□□□ -1.11
PTPRA-202ENST00000318266 SPSB4Q96A44 273 aa8.1□□□□□ -1.11
PTPRA-202ENST00000318266 KNTC1P50748 2209 aa8.1□□□□□ -1.11
PTPRA-202ENST00000318266 MUC3AQ02505 3323 aa8.1□□□□□ -1.11
PTPRA-202ENST00000318266 DNAJC13O75165 2243 aa8.1□□□□□ -1.11
PTPRA-202ENST00000318266 A0A1W2PQM1 296 aa8.1□□□□□ -1.11
PTPRA-202ENST00000318266 LRRC30A6NM36 301 aa8.1□□□□□ -1.11
PTPRA-202ENST00000318266 C17orf98A8MV24 154 aa8.1□□□□□ -1.11
PTPRA-202ENST00000318266 PDE6DO43924 150 aa8.1□□□□□ -1.11
PTPRA-202ENST00000318266 TIMP3P35625 211 aa8.1□□□□□ -1.11
PTPRA-202ENST00000318266 COMPP49747 757 aaPredicted RBP8.1□□□□□ -1.11
PTPRA-202ENST00000318266 HINT1P49773 126 aaPredicted RBP8.1□□□□□ -1.11
PTPRA-202ENST00000318266 SUMO1P63165 101 aaKnown RBP8.1□□□□□ -1.11
PTPRA-202ENST00000318266 RNF151Q2KHN1 245 aa8.1□□□□□ -1.11
PTPRA-202ENST00000318266 KRTAP27-1Q3LI81 207 aa8.1□□□□□ -1.11
PTPRA-202ENST00000318266 ASPHD1Q5U4P2 390 aa8.1□□□□□ -1.11
PTPRA-202ENST00000318266 ETFRF1Q6IPR1 90 aa8.1□□□□□ -1.11
PTPRA-202ENST00000318266 SYT13Q7L8C5 426 aa8.1□□□□□ -1.11
PTPRA-202ENST00000318266 GGNQ86UU5 652 aa8.1□□□□□ -1.11
PTPRA-202ENST00000318266 RPS19BP1Q86WX3 136 aaKnown RBP8.1□□□□□ -1.11
PTPRA-202ENST00000318266 FAM19A2Q8N3H0 131 aa8.1□□□□□ -1.11
PTPRA-202ENST00000318266 SSMEM1Q8WWF3 244 aa8.1□□□□□ -1.11
PTPRA-202ENST00000318266 STARD4Q96DR4 205 aa8.1□□□□□ -1.11
PTPRA-202ENST00000318266 SF3B5Q9BWJ5 86 aaKnown RBP8.1□□□□□ -1.11
PTPRA-202ENST00000318266 FAM234AQ9H0X4 552 aa8.1□□□□□ -1.11
PTPRA-202ENST00000318266 ZNF703Q9H7S9 590 aaPredicted RBP8.1□□□□□ -1.11
PTPRA-202ENST00000318266 HSPB7Q9UBY9 170 aa8.1□□□□□ -1.11
PTPRA-202ENST00000318266 TBL2Q9Y4P3 447 aaKnown RBP8.1□□□□□ -1.11
PTPRA-202ENST00000318266 WIPI2Q9Y4P8 454 aa8.1□□□□□ -1.11
PTPRA-202ENST00000318266 NTF3P20783 257 aa8.1□□□□□ -1.11
PTPRA-202ENST00000318266 PAFAH1B2P68402 229 aa8.1□□□□□ -1.11
PTPRA-202ENST00000318266 CCL7P80098 99 aa8.1□□□□□ -1.11
PTPRA-202ENST00000318266 SRSF7Q16629 238 aaKnown RBP eCLIP8.1□□□□□ -1.11
PTPRA-202ENST00000318266 LTC4SQ16873 150 aa8.1□□□□□ -1.11
PTPRA-202ENST00000318266 MAJINQ3KP22 176 aa8.1□□□□□ -1.11
PTPRA-202ENST00000318266 OR8I2Q8N0Y5 310 aa8.1□□□□□ -1.11
PTPRA-202ENST00000318266 PRDM14Q9GZV8 571 aa8.1□□□□□ -1.11
PTPRA-202ENST00000318266 GNB4Q9HAV0 340 aa8.1□□□□□ -1.11
PTPRA-202ENST00000318266 AHCTF1Q8WYP5 2266 aa8.1□□□□□ -1.11
PTPRA-202ENST00000318266 GJE1A6NN92 205 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms