RNA–Protein interactions for RNA: ENST00000316763.7

VRK3-201, Transcript of vaccinia related kinase 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VRK3, Length 1,938 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-201ENST00000316763 S1PR2O95136 353 aa11.78□□□□□ -0.52
VRK3-201ENST00000316763 GZMHP20718 246 aa11.78□□□□□ -0.52
VRK3-201ENST00000316763 HABP2Q14520 560 aaPredicted RBP11.78□□□□□ -0.52
VRK3-201ENST00000316763 TMEM41BQ5BJD5 291 aa11.78□□□□□ -0.52
VRK3-201ENST00000316763 OR2B11Q5JQS5 317 aa11.78□□□□□ -0.52
VRK3-201ENST00000316763 ZNF787Q6DD87 383 aa11.78□□□□□ -0.52
VRK3-201ENST00000316763 TMEM14EPQ6UXP3 125 aa11.78□□□□□ -0.52
VRK3-201ENST00000316763 H2BFWTQ7Z2G1 175 aa11.78□□□□□ -0.52
VRK3-201ENST00000316763 ZNF429Q86V71 674 aa11.78□□□□□ -0.52
VRK3-201ENST00000316763 C5orf30Q96GV9 206 aa11.78□□□□□ -0.52
VRK3-201ENST00000316763 OR4C12Q96R67 309 aa11.78□□□□□ -0.52
VRK3-201ENST00000316763 NIPSNAP3BQ9BS92 247 aa11.78□□□□□ -0.52
VRK3-201ENST00000316763 DUSP13Q9UII6 198 aa11.78□□□□□ -0.52
VRK3-201ENST00000316763 METRNQ9UJH8 293 aa11.78□□□□□ -0.52
VRK3-201ENST00000316763 TIMM9Q9Y5J7 89 aa11.78□□□□□ -0.52
VRK3-201ENST00000316763 CACNA1DQ01668 2161 aa11.78□□□□□ -0.52
VRK3-201ENST00000316763 ODAMA1E959 279 aa11.77□□□□□ -0.53
VRK3-201ENST00000316763 C17orf98A8MV24 154 aa11.77□□□□□ -0.53
VRK3-201ENST00000316763 OR2C1O95371 312 aa11.77□□□□□ -0.53
VRK3-201ENST00000316763 RAB5AP20339 215 aa11.77□□□□□ -0.53
VRK3-201ENST00000316763 SSTR5P35346 364 aa11.77□□□□□ -0.53
VRK3-201ENST00000316763 RPL35P42766 123 aaKnown RBP11.77□□□□□ -0.53
VRK3-201ENST00000316763 NCMAPQ5T1S8 102 aa11.77□□□□□ -0.53
VRK3-201ENST00000316763 VHLLQ6RSH7 139 aa11.77□□□□□ -0.53
VRK3-201ENST00000316763 BTNL3Q6UXE8 466 aa11.77□□□□□ -0.53
VRK3-201ENST00000316763 CD177Q8N6Q3 437 aa11.77□□□□□ -0.53
VRK3-201ENST00000316763 TAF15Q92804 592 aaKnown RBP eCLIP11.77□□□□□ -0.53
VRK3-201ENST00000316763 ISOC2Q96AB3 205 aa11.77□□□□□ -0.53
VRK3-201ENST00000316763 TVP23CQ96ET8 276 aa11.77□□□□□ -0.53
VRK3-201ENST00000316763 CISD1Q9NZ45 108 aaKnown RBP11.77□□□□□ -0.53
VRK3-201ENST00000316763 GNG13Q9P2W3 67 aa11.77□□□□□ -0.53
VRK3-201ENST00000316763 CHD3Q12873 2000 aaKnown RBP11.77□□□□□ -0.53
VRK3-201ENST00000316763 DOPEY1Q5JWR5 2465 aa11.77□□□□□ -0.53
VRK3-201ENST00000316763 A0A087WWC5 75 aa11.76□□□□□ -0.53
VRK3-201ENST00000316763 SRRM5B3KS81 715 aa11.76□□□□□ -0.53
VRK3-201ENST00000316763 C19orf84I3L1E1 186 aa11.76□□□□□ -0.53
VRK3-201ENST00000316763 IFNA1P01562 189 aa11.76□□□□□ -0.53
VRK3-201ENST00000316763 TFF1P04155 84 aa11.76□□□□□ -0.53
VRK3-201ENST00000316763 ARG1P05089 322 aa11.76□□□□□ -0.53
VRK3-201ENST00000316763 S100A6P06703 90 aa11.76□□□□□ -0.53
VRK3-201ENST00000316763 CFHR2P36980 270 aa11.76□□□□□ -0.53
VRK3-201ENST00000316763 OR8G2PQ6IF36 304 aa11.76□□□□□ -0.53
VRK3-201ENST00000316763 CYB561D1Q8N8Q1 229 aa11.76□□□□□ -0.53
VRK3-201ENST00000316763 LINC01560Q8TB33 94 aa11.76□□□□□ -0.53
VRK3-201ENST00000316763 SNX22Q96L94 193 aa11.76□□□□□ -0.53
VRK3-201ENST00000316763 MRPL37Q9BZE1 423 aaKnown RBP11.76□□□□□ -0.53
VRK3-201ENST00000316763 PSG11Q9UQ72 335 aa11.76□□□□□ -0.53
VRK3-201ENST00000316763 IGHV3-43A0A0B4J1X8 118 aa11.76□□□□□ -0.53
VRK3-201ENST00000316763 UBE2L5PA0A1B0GUS4 154 aa11.76□□□□□ -0.53
VRK3-201ENST00000316763 A0A1W2PPE2 198 aa11.76□□□□□ -0.53
VRK3-201ENST00000316763 MGST3O14880 152 aa11.76□□□□□ -0.53
VRK3-201ENST00000316763 RBMXL2O75526 392 aaKnown RBP11.76□□□□□ -0.53
VRK3-201ENST00000316763 IGHV3-43DP0DP04 118 aa11.76□□□□□ -0.53
VRK3-201ENST00000316763 MAS1LP35410 378 aa11.76□□□□□ -0.53
VRK3-201ENST00000316763 TAGLN2P37802 199 aaKnown RBP11.76□□□□□ -0.53
VRK3-201ENST00000316763 HOXA4Q00056 320 aaPredicted RBP11.76□□□□□ -0.53
VRK3-201ENST00000316763 EDDM3AQ14507 147 aa11.76□□□□□ -0.53
VRK3-201ENST00000316763 Q3ZCU0 254 aa11.76□□□□□ -0.53
VRK3-201ENST00000316763 SLC35E3Q7Z769 313 aa11.76□□□□□ -0.53
VRK3-201ENST00000316763 FAM24BQ8N5W8 94 aa11.76□□□□□ -0.53
VRK3-201ENST00000316763 TPRX1Q8N7U7 411 aa11.76□□□□□ -0.53
VRK3-201ENST00000316763 RFESDQ8TAC1 157 aa11.76□□□□□ -0.53
VRK3-201ENST00000316763 RAB39BQ96DA2 213 aa11.76□□□□□ -0.53
VRK3-201ENST00000316763 MALSU1Q96EH3 234 aa11.76□□□□□ -0.53
VRK3-201ENST00000316763 TMEM147Q9BVK8 224 aa11.76□□□□□ -0.53
VRK3-201ENST00000316763 USF3Q68DE3 2245 aa11.75□□□□□ -0.53
VRK3-201ENST00000316763 SHISA9B4DS77 424 aa11.75□□□□□ -0.53
VRK3-201ENST00000316763 C15orf65H3BRN8 121 aa11.75□□□□□ -0.53
VRK3-201ENST00000316763 LY86O95711 162 aa11.75□□□□□ -0.53
VRK3-201ENST00000316763 BCL2P10415 239 aa11.75□□□□□ -0.53
VRK3-201ENST00000316763 GPR12P47775 334 aa11.75□□□□□ -0.53
VRK3-201ENST00000316763 SELENOVP59797 346 aa11.75□□□□□ -0.53
VRK3-201ENST00000316763 FAM53AQ6NSI3 398 aaPredicted RBP11.75□□□□□ -0.53
VRK3-201ENST00000316763 LCN15Q6UWW0 184 aa11.75□□□□□ -0.53
VRK3-201ENST00000316763 DMRTC2Q8IXT2 367 aaPredicted RBP11.75□□□□□ -0.53
VRK3-201ENST00000316763 OR10P1Q8NGE3 313 aa11.75□□□□□ -0.53
VRK3-201ENST00000316763 DTD1Q8TEA8 209 aa11.75□□□□□ -0.53
VRK3-201ENST00000316763 RCC1LQ96I51 464 aaKnown RBP11.75□□□□□ -0.53
VRK3-201ENST00000316763 JPT1Q9UK76 154 aa11.75□□□□□ -0.53
VRK3-201ENST00000316763 TENM4Q6N022 2769 aa11.74□□□□□ -0.53
VRK3-201ENST00000316763 DEFB108AA8MXU0 73 aa11.74□□□□□ -0.53
VRK3-201ENST00000316763 ST8SIA5O15466 376 aa11.74□□□□□ -0.53
VRK3-201ENST00000316763 ZNF737O75373 536 aa11.74□□□□□ -0.53
VRK3-201ENST00000316763 MBP02144 154 aa11.74□□□□□ -0.53
VRK3-201ENST00000316763 DLK1P80370 383 aa11.74□□□□□ -0.53
VRK3-201ENST00000316763 ADIPOQQ15848 244 aa11.74□□□□□ -0.53
VRK3-201ENST00000316763 CENPVQ7Z7K6 275 aaPredicted RBP11.74□□□□□ -0.53
VRK3-201ENST00000316763 PLPPR2Q96GM1 343 aa11.74□□□□□ -0.53
VRK3-201ENST00000316763 P2RX4Q99571 388 aa11.74□□□□□ -0.53
VRK3-201ENST00000316763 VSIRQ9H7M9 311 aa11.74□□□□□ -0.53
VRK3-201ENST00000316763 RAB9BQ9NP90 201 aa11.74□□□□□ -0.53
VRK3-201ENST00000316763 SIRT7Q9NRC8 400 aa11.74□□□□□ -0.53
VRK3-201ENST00000316763 SLC39A9Q9NUM3 307 aa11.74□□□□□ -0.53
VRK3-201ENST00000316763 GNG12Q9UBI6 72 aa11.74□□□□□ -0.53
VRK3-201ENST00000316763 CLN8Q9UBY8 286 aa11.74□□□□□ -0.53
VRK3-201ENST00000316763 HELZ2Q9BYK8 2649 aaKnown RBP11.74□□□□□ -0.53
VRK3-201ENST00000316763 IGKV1D-17A0A075B6S4 117 aa11.74□□□□□ -0.53
VRK3-201ENST00000316763 ZFP92A6NM28 416 aa11.74□□□□□ -0.53
VRK3-201ENST00000316763 CEBPZOSA8MTT3 80 aa11.74□□□□□ -0.53
VRK3-201ENST00000316763 B4DEV8 164 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms