RNA–Protein interactions for RNA: ENST00000315285.7

SPAST-201, Transcript of spastin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SPAST, Length 5,117 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-201ENST00000315285 HIGD1AQ9Y241 93 aa11.75□□□□□ -0.53
SPAST-201ENST00000315285 MC5RP33032 325 aa11.75□□□□□ -0.53
SPAST-201ENST00000315285 KRTCAP3Q53RY4 240 aa11.75□□□□□ -0.53
SPAST-201ENST00000315285 ZNF343Q6P1L6 599 aa11.75□□□□□ -0.53
SPAST-201ENST00000315285 DOLPP1Q86YN1 238 aa11.75□□□□□ -0.53
SPAST-201ENST00000315285 SIGLEC12Q96PQ1 595 aa11.75□□□□□ -0.53
SPAST-201ENST00000315285 MAP1LC3CQ9BXW4 147 aa11.75□□□□□ -0.53
SPAST-201ENST00000315285 FOXJ2Q9P0K8 574 aa11.75□□□□□ -0.53
SPAST-201ENST00000315285 UFC1Q9Y3C8 167 aa11.75□□□□□ -0.53
SPAST-201ENST00000315285 DICER1Q9UPY3 1922 aaKnown RBP11.75□□□□□ -0.53
SPAST-201ENST00000315285 M0QZK8 103 aa11.75□□□□□ -0.53
SPAST-201ENST00000315285 GGCTO75223 188 aaKnown RBP11.75□□□□□ -0.53
SPAST-201ENST00000315285 MRPL14Q6P1L8 145 aaKnown RBP11.75□□□□□ -0.53
SPAST-201ENST00000315285 PSMG3Q9BT73 122 aaPredicted RBP11.75□□□□□ -0.53
SPAST-201ENST00000315285 RPRMQ9NS64 109 aa11.75□□□□□ -0.53
SPAST-201ENST00000315285 F5H697 171 aa11.75□□□□□ -0.53
SPAST-201ENST00000315285 ORM1P02763 201 aa11.75□□□□□ -0.53
SPAST-201ENST00000315285 MT-ND6P03923 174 aa11.75□□□□□ -0.53
SPAST-201ENST00000315285 ZNF137PP52743 207 aa11.75□□□□□ -0.53
SPAST-201ENST00000315285 LY6G6FQ5SQ64 297 aa11.75□□□□□ -0.53
SPAST-201ENST00000315285 IGHV3-72A0A0B4J1Y9 119 aa11.74□□□□□ -0.53
SPAST-201ENST00000315285 PRSS1P07477 247 aa11.74□□□□□ -0.53
SPAST-201ENST00000315285 UCP1P25874 307 aa11.74□□□□□ -0.53
SPAST-201ENST00000315285 SSTR5P35346 364 aa11.74□□□□□ -0.53
SPAST-201ENST00000315285 ZNF788Q6ZQV5 615 aa11.74□□□□□ -0.53
SPAST-201ENST00000315285 ZDHHC8Q9ULC8 765 aa11.74□□□□□ -0.53
SPAST-201ENST00000315285 TCF19Q9Y242 345 aa11.74□□□□□ -0.53
SPAST-201ENST00000315285 NAT2P11245 290 aa11.74□□□□□ -0.53
SPAST-201ENST00000315285 PAFAH1B2P68402 229 aa11.74□□□□□ -0.53
SPAST-201ENST00000315285 OR1P1Q8NH06 330 aa11.74□□□□□ -0.53
SPAST-201ENST00000315285 IDI2-AS1Q9NZ38 188 aa11.74□□□□□ -0.53
SPAST-201ENST00000315285 FREM3P0C091 2139 aa11.74□□□□□ -0.53
SPAST-201ENST00000315285 SCN5AQ14524 2016 aa11.74□□□□□ -0.53
SPAST-201ENST00000315285 A0A0G2JMM0 328 aa11.74□□□□□ -0.53
SPAST-201ENST00000315285 A0A1W2PPB8 328 aa11.74□□□□□ -0.53
SPAST-201ENST00000315285 A0A1W2PRS3 328 aa11.74□□□□□ -0.53
SPAST-201ENST00000315285 KIR3DP1A8MWS1 328 aa11.74□□□□□ -0.53
SPAST-201ENST00000315285 MST1P26927 711 aa11.74□□□□□ -0.53
SPAST-201ENST00000315285 IBA57Q5T440 356 aaKnown RBP11.74□□□□□ -0.53
SPAST-201ENST00000315285 GPR61Q9BZJ8 451 aa11.74□□□□□ -0.53
SPAST-201ENST00000315285 DIRC3C9JPN6 131 aa11.74□□□□□ -0.53
SPAST-201ENST00000315285 DLL1O00548 723 aa11.74□□□□□ -0.53
SPAST-201ENST00000315285 LEAP2Q969E1 77 aa11.74□□□□□ -0.53
SPAST-201ENST00000315285 C1QTNF5Q9BXJ0 243 aa11.74□□□□□ -0.53
SPAST-201ENST00000315285 PARLQ9H300 379 aa11.74□□□□□ -0.53
SPAST-201ENST00000315285 ZNF318Q5VUA4 2279 aa11.74□□□□□ -0.53
SPAST-201ENST00000315285 OR2T8A6NH00 312 aa11.74□□□□□ -0.53
SPAST-201ENST00000315285 ARL14EPLP0DKL9 152 aa11.74□□□□□ -0.53
SPAST-201ENST00000315285 NRN1LQ496H8 165 aa11.74□□□□□ -0.53
SPAST-201ENST00000315285 TMEM97Q5BJF2 176 aa11.74□□□□□ -0.53
SPAST-201ENST00000315285 SLC35E4Q6ICL7 350 aa11.74□□□□□ -0.53
SPAST-201ENST00000315285 GDF9O60383 454 aa11.73□□□□□ -0.53
SPAST-201ENST00000315285 ZNF506Q5JVG8 444 aa11.73□□□□□ -0.53
SPAST-201ENST00000315285 PLSCR2Q9NRY7 297 aa11.73□□□□□ -0.53
SPAST-201ENST00000315285 PLAUP00749 431 aa11.73□□□□□ -0.53
SPAST-201ENST00000315285 AGAP20933 346 aa11.73□□□□□ -0.53
SPAST-201ENST00000315285 HCP5Q6MZN7 132 aa11.73□□□□□ -0.53
SPAST-201ENST00000315285 Q6ZT83 130 aa11.73□□□□□ -0.53
SPAST-201ENST00000315285 ABHD12Q8N2K0 398 aa11.73□□□□□ -0.53
SPAST-201ENST00000315285 REPIN1Q9BWE0 567 aaKnown RBP11.73□□□□□ -0.53
SPAST-201ENST00000315285 KCNMB2Q9Y691 235 aa11.73□□□□□ -0.53
SPAST-201ENST00000315285 MED12Q93074 2177 aa11.73□□□□□ -0.53
SPAST-201ENST00000315285 IGKV1-9A0A0C4DH69 117 aa11.73□□□□□ -0.53
SPAST-201ENST00000315285 A8MWL6 223 aa11.73□□□□□ -0.53
SPAST-201ENST00000315285 RHBDL1O75783 438 aa11.73□□□□□ -0.53
SPAST-201ENST00000315285 SP9P0CG40 484 aa11.73□□□□□ -0.53
SPAST-201ENST00000315285 CCDC144NLQ6NUI1 221 aa11.73□□□□□ -0.53
SPAST-201ENST00000315285 ATRAIDQ6UW56 229 aa11.73□□□□□ -0.53
SPAST-201ENST00000315285 GBGT1Q8N5D6 347 aa11.73□□□□□ -0.53
SPAST-201ENST00000315285 RCC1LQ96I51 464 aaKnown RBP11.73□□□□□ -0.53
SPAST-201ENST00000315285 HSPB9Q9BQS6 159 aa11.73□□□□□ -0.53
SPAST-201ENST00000315285 KBTBD11O94819 623 aa11.73□□□□□ -0.53
SPAST-201ENST00000315285 CDX1P47902 265 aaPredicted RBP11.73□□□□□ -0.53
SPAST-201ENST00000315285 VKORC1L1Q8N0U8 176 aa11.73□□□□□ -0.53
SPAST-201ENST00000315285 FGF11Q92914 225 aa11.73□□□□□ -0.53
SPAST-201ENST00000315285 SNRNP40Q96DI7 357 aaKnown RBP11.73□□□□□ -0.53
SPAST-201ENST00000315285 WNT9BO14905 357 aa11.72□□□□□ -0.53
SPAST-201ENST00000315285 CTSSP25774 331 aa11.72□□□□□ -0.53
SPAST-201ENST00000315285 PRNTQ86SH4 94 aa11.72□□□□□ -0.53
SPAST-201ENST00000315285 MMD2Q8IY49 270 aa11.72□□□□□ -0.53
SPAST-201ENST00000315285 ZNF430Q9H8G1 570 aaPredicted RBP11.72□□□□□ -0.53
SPAST-201ENST00000315285 GP6Q9HCN6 339 aa11.72□□□□□ -0.53
SPAST-201ENST00000315285 TMSB15BA0A087X1C1 80 aa11.72□□□□□ -0.53
SPAST-201ENST00000315285 CCL21O00585 134 aa11.72□□□□□ -0.53
SPAST-201ENST00000315285 ZNF735P0CB33 412 aa11.72□□□□□ -0.53
SPAST-201ENST00000315285 ERVFRD-1P60508 538 aa11.72□□□□□ -0.53
SPAST-201ENST00000315285 RPL30P62888 115 aaKnown RBP11.72□□□□□ -0.53
SPAST-201ENST00000315285 ARTNQ5T4W7 220 aa11.72□□□□□ -0.53
SPAST-201ENST00000315285 RNF126Q9BV68 326 aa11.72□□□□□ -0.53
SPAST-201ENST00000315285 OR51M1Q9H341 326 aa11.72□□□□□ -0.53
SPAST-201ENST00000315285 RND2P52198 227 aa11.72□□□□□ -0.53
SPAST-201ENST00000315285 PAQR4Q8N4S7 273 aaPredicted RBP11.72□□□□□ -0.53
SPAST-201ENST00000315285 PRDM6Q9NQX0 595 aa11.72□□□□□ -0.53
SPAST-201ENST00000315285 ZMAT5Q9UDW3 170 aaKnown RBP11.72□□□□□ -0.53
SPAST-201ENST00000315285 EP300Q09472 2414 aaPredicted RBP11.72□□□□□ -0.53
SPAST-201ENST00000315285 SPTBN2O15020 2390 aa11.72□□□□□ -0.53
SPAST-201ENST00000315285 C12orf77C9JDV5 145 aa11.72□□□□□ -0.53
SPAST-201ENST00000315285 CORTO00230 105 aa11.72□□□□□ -0.53
SPAST-201ENST00000315285 UMODP07911 640 aa11.72□□□□□ -0.53
SPAST-201ENST00000315285 ZSWIM8A7E2V4 1837 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms