RNA–Protein interactions for RNA: ENST00000307767.12

TVP23B-201, Transcript of trans-golgi network vesicle protein 23 homolog B, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TVP23B, Length 2,064 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23B-201ENST00000307767 SHISA9B4DS77 424 aa13.59□□□□□ -0.23
TVP23B-201ENST00000307767 TNFRSF13BO14836 293 aaPredicted RBP13.59□□□□□ -0.23
TVP23B-201ENST00000307767 IGKV1D-33P01593 117 aa13.59□□□□□ -0.23
TVP23B-201ENST00000307767 IGKV1-33P01594 117 aa13.59□□□□□ -0.23
TVP23B-201ENST00000307767 MDKP21741 143 aaPredicted RBP13.59□□□□□ -0.23
TVP23B-201ENST00000307767 RPS16P62249 146 aaKnown RBP13.59□□□□□ -0.23
TVP23B-201ENST00000307767 NHLH1Q02575 133 aa13.59□□□□□ -0.23
TVP23B-201ENST00000307767 HAGHQ16775 308 aa13.59□□□□□ -0.23
TVP23B-201ENST00000307767 VKORC1L1Q8N0U8 176 aa13.59□□□□□ -0.23
TVP23B-201ENST00000307767 CLDND2Q8NHS1 167 aa13.59□□□□□ -0.23
TVP23B-201ENST00000307767 TAF15Q92804 592 aaKnown RBP eCLIP13.59□□□□□ -0.23
TVP23B-201ENST00000307767 PBDC1Q9BVG4 233 aa13.59□□□□□ -0.23
TVP23B-201ENST00000307767 ROS1P08922 2347 aa13.59□□□□□ -0.23
TVP23B-201ENST00000307767 SRP19P09132 144 aaKnown RBP13.59□□□□□ -0.23
TVP23B-201ENST00000307767 AKR1C3P42330 323 aa13.59□□□□□ -0.23
TVP23B-201ENST00000307767 ERVFRD-1P60508 538 aa13.59□□□□□ -0.23
TVP23B-201ENST00000307767 SCGB1C1Q8TD33 95 aa13.59□□□□□ -0.23
TVP23B-201ENST00000307767 MBD3L1Q8WWY6 194 aa13.59□□□□□ -0.23
TVP23B-201ENST00000307767 NEUROG1Q92886 237 aa13.59□□□□□ -0.23
TVP23B-201ENST00000307767 SMDT1Q9H4I9 107 aa13.59□□□□□ -0.23
TVP23B-201ENST00000307767 SAA2-SAA4A0A096LPE2 208 aa13.58□□□□□ -0.24
TVP23B-201ENST00000307767 C15orf62A8K5M9 175 aa13.58□□□□□ -0.24
TVP23B-201ENST00000307767 COLCA2A8K830 154 aa13.58□□□□□ -0.24
TVP23B-201ENST00000307767 SAA2P0DJI9 122 aaPredicted RBP13.58□□□□□ -0.24
TVP23B-201ENST00000307767 OR13C7P0DN81 318 aa13.58□□□□□ -0.24
TVP23B-201ENST00000307767 OR2B8PP59922 312 aa13.58□□□□□ -0.24
TVP23B-201ENST00000307767 AWAT1Q58HT5 328 aa13.58□□□□□ -0.24
TVP23B-201ENST00000307767 ZNF506Q5JVG8 444 aa13.58□□□□□ -0.24
TVP23B-201ENST00000307767 LILRB2Q8N423 598 aa13.58□□□□□ -0.24
TVP23B-201ENST00000307767 TRGV10A0A0A0MS01 117 aa13.57□□□□□ -0.24
TVP23B-201ENST00000307767 E7EQL1 145 aa13.57□□□□□ -0.24
TVP23B-201ENST00000307767 SCAF4O95104 1147 aaKnown RBP13.57□□□□□ -0.24
TVP23B-201ENST00000307767 FBP1P09467 338 aa13.57□□□□□ -0.24
TVP23B-201ENST00000307767 RELBQ01201 579 aa13.57□□□□□ -0.24
TVP23B-201ENST00000307767 TLE4Q04727 773 aa13.57□□□□□ -0.24
TVP23B-201ENST00000307767 VWC2Q2TAL6 325 aa13.57□□□□□ -0.24
TVP23B-201ENST00000307767 SLC25A24Q6NUK1 477 aa13.57□□□□□ -0.24
TVP23B-201ENST00000307767 ZNF383Q8NA42 475 aa13.57□□□□□ -0.24
TVP23B-201ENST00000307767 VKORC1Q9BQB6 163 aa13.57□□□□□ -0.24
TVP23B-201ENST00000307767 NDRG3Q9UGV2 375 aa13.57□□□□□ -0.24
TVP23B-201ENST00000307767 UBE2L5PA0A1B0GUS4 154 aa13.57□□□□□ -0.24
TVP23B-201ENST00000307767 C7orf77A4D0Y5 90 aa13.57□□□□□ -0.24
TVP23B-201ENST00000307767 FAM90A9PA6NNJ1 464 aa13.57□□□□□ -0.24
TVP23B-201ENST00000307767 SERF2P84101 59 aa13.57□□□□□ -0.24
TVP23B-201ENST00000307767 PDLIM3Q53GG5 364 aaPredicted RBP13.57□□□□□ -0.24
TVP23B-201ENST00000307767 SSX9Q7RTT3 188 aa13.57□□□□□ -0.24
TVP23B-201ENST00000307767 Q8N7P7 452 aa13.57□□□□□ -0.24
TVP23B-201ENST00000307767 RND1Q92730 232 aa13.57□□□□□ -0.24
TVP23B-201ENST00000307767 RCC1LQ96I51 464 aaKnown RBP13.57□□□□□ -0.24
TVP23B-201ENST00000307767 DIRC2Q96SL1 478 aa13.57□□□□□ -0.24
TVP23B-201ENST00000307767 IDI2-AS1Q9NZ38 188 aa13.57□□□□□ -0.24
TVP23B-201ENST00000307767 ZNRD1Q9P1U0 126 aa13.57□□□□□ -0.24
TVP23B-201ENST00000307767 ZNF729A6NN14 1252 aaPredicted RBP13.56□□□□□ -0.24
TVP23B-201ENST00000307767 EIF3GO75821 320 aaKnown RBP eCLIP13.56□□□□□ -0.24
TVP23B-201ENST00000307767 TNFRSF1AP19438 455 aa13.56□□□□□ -0.24
TVP23B-201ENST00000307767 VDAC2P45880 294 aaPredicted RBP13.56□□□□□ -0.24
TVP23B-201ENST00000307767 GNB2P62879 340 aa13.56□□□□□ -0.24
TVP23B-201ENST00000307767 NCMAPQ5T1S8 102 aa13.56□□□□□ -0.24
TVP23B-201ENST00000307767 ACSM6Q6P461 480 aa13.56□□□□□ -0.24
TVP23B-201ENST00000307767 RPP25LQ8N5L8 163 aaKnown RBP13.56□□□□□ -0.24
TVP23B-201ENST00000307767 TMEM170AQ8WVE7 144 aa13.56□□□□□ -0.24
TVP23B-201ENST00000307767 ZCCHC14Q8WYQ9 949 aaKnown RBP13.56□□□□□ -0.24
TVP23B-201ENST00000307767 RAXQ9Y2V3 346 aa13.56□□□□□ -0.24
TVP23B-201ENST00000307767 TMEM178BH3BS89 294 aa13.55□□□□□ -0.24
TVP23B-201ENST00000307767 ARG1P05089 322 aa13.55□□□□□ -0.24
TVP23B-201ENST00000307767 RAB7AP51149 207 aa13.55□□□□□ -0.24
TVP23B-201ENST00000307767 TLE1Q04724 770 aa13.55□□□□□ -0.24
TVP23B-201ENST00000307767 CLCC1Q96S66 551 aa13.55□□□□□ -0.24
TVP23B-201ENST00000307767 C20orf24Q9BUV8 137 aa13.55□□□□□ -0.24
TVP23B-201ENST00000307767 RPUSD1Q9UJJ7 312 aaKnown RBP13.55□□□□□ -0.24
TVP23B-201ENST00000307767 TIMM9Q9Y5J7 89 aa13.55□□□□□ -0.24
TVP23B-201ENST00000307767 DOCK11Q5JSL3 2073 aa13.55□□□□□ -0.24
TVP23B-201ENST00000307767 CEBPZOSA8MTT3 80 aa13.55□□□□□ -0.24
TVP23B-201ENST00000307767 DAOP14920 347 aa13.55□□□□□ -0.24
TVP23B-201ENST00000307767 ATP6V1FQ16864 119 aa13.55□□□□□ -0.24
TVP23B-201ENST00000307767 PRAMEF5Q5TYX0 476 aa13.55□□□□□ -0.24
TVP23B-201ENST00000307767 SSX8Q7RTT4 187 aa13.55□□□□□ -0.24
TVP23B-201ENST00000307767 ZNF436-AS1Q8NC38 126 aaPredicted RBP13.55□□□□□ -0.24
TVP23B-201ENST00000307767 RNASE6Q93091 150 aaKnown RBP13.55□□□□□ -0.24
TVP23B-201ENST00000307767 CIB3Q96Q77 187 aaPredicted RBP13.55□□□□□ -0.24
TVP23B-201ENST00000307767 S1PR3Q99500 378 aa13.55□□□□□ -0.24
TVP23B-201ENST00000307767 TMEM147Q9BVK8 224 aa13.55□□□□□ -0.24
TVP23B-201ENST00000307767 LOC102723971A0A1B0GUV8 181 aa13.54□□□□□ -0.24
TVP23B-201ENST00000307767 TMPRSS2O15393 492 aa13.54□□□□□ -0.24
TVP23B-201ENST00000307767 IRF2P14316 349 aa13.54□□□□□ -0.24
TVP23B-201ENST00000307767 NQO2P16083 231 aa13.54□□□□□ -0.24
TVP23B-201ENST00000307767 TMPRSS3P57727 454 aa13.54□□□□□ -0.24
TVP23B-201ENST00000307767 RAB2AP61019 212 aa13.54□□□□□ -0.24
TVP23B-201ENST00000307767 MRPS11P82912 194 aaKnown RBP13.54□□□□□ -0.24
TVP23B-201ENST00000307767 TFF3Q07654 80 aa13.54□□□□□ -0.24
TVP23B-201ENST00000307767 HNF4GQ14541 408 aa13.54□□□□□ -0.24
TVP23B-201ENST00000307767 TMEM41BQ5BJD5 291 aa13.54□□□□□ -0.24
TVP23B-201ENST00000307767 LYPD2Q6UXB3 125 aa13.54□□□□□ -0.24
TVP23B-201ENST00000307767 SLC25A48Q6ZT89 311 aaKnown RBP13.54□□□□□ -0.24
TVP23B-201ENST00000307767 OR52E5Q8NH55 327 aa13.54□□□□□ -0.24
TVP23B-201ENST00000307767 RXFP4Q8TDU9 374 aa13.54□□□□□ -0.24
TVP23B-201ENST00000307767 EGLN1Q9GZT9 426 aa13.54□□□□□ -0.24
TVP23B-201ENST00000307767 TMEM140Q9NV12 185 aa13.54□□□□□ -0.24
TVP23B-201ENST00000307767 TANC2Q9HCD6 1990 aa13.54□□□□□ -0.24
TVP23B-201ENST00000307767 POLEQ07864 2286 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms