RNA–Protein interactions for RNA: ENST00000300917.9

SMG8-201, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG8, Length 3,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-201ENST00000300917 LYPD2Q6UXB3 125 aa12.04□□□□□ -0.48
SMG8-201ENST00000300917 DTD1Q8TEA8 209 aa12.04□□□□□ -0.48
SMG8-201ENST00000300917 IFI27L2Q9H2X8 130 aa12.04□□□□□ -0.48
SMG8-201ENST00000300917 OR6C3Q9NZP0 311 aa12.04□□□□□ -0.48
SMG8-201ENST00000300917 CD5P06127 495 aa12.04□□□□□ -0.48
SMG8-201ENST00000300917 CFHR2P36980 270 aa12.04□□□□□ -0.48
SMG8-201ENST00000300917 REG1BP48304 166 aa12.04□□□□□ -0.48
SMG8-201ENST00000300917 BPIFB3P59826 476 aa12.04□□□□□ -0.48
SMG8-201ENST00000300917 HTD2P86397 168 aa12.04□□□□□ -0.48
SMG8-201ENST00000300917 EIF4EBP1Q13541 118 aaPredicted RBP12.04□□□□□ -0.48
SMG8-201ENST00000300917 TCF23Q7RTU1 214 aa12.04□□□□□ -0.48
SMG8-201ENST00000300917 ZNF525Q8N782 197 aa12.04□□□□□ -0.48
SMG8-201ENST00000300917 Q8TCH9 128 aa12.04□□□□□ -0.48
SMG8-201ENST00000300917 ZNF665Q9H7R5 613 aa12.04□□□□□ -0.48
SMG8-201ENST00000300917 ELOVL5Q9NYP7 299 aa12.04□□□□□ -0.48
SMG8-201ENST00000300917 SSUH2Q9Y2M2 353 aa12.04□□□□□ -0.48
SMG8-201ENST00000300917 ZBTB34Q8NCN2 500 aa12.03□□□□□ -0.48
SMG8-201ENST00000300917 HSD17B10Q99714 261 aaKnown RBP12.03□□□□□ -0.48
SMG8-201ENST00000300917 SAA2-SAA4A0A096LPE2 208 aa12.03□□□□□ -0.48
SMG8-201ENST00000300917 E7EQL1 145 aa12.03□□□□□ -0.48
SMG8-201ENST00000300917 SAA2P0DJI9 122 aaPredicted RBP12.03□□□□□ -0.48
SMG8-201ENST00000300917 LY6DQ14210 128 aa12.03□□□□□ -0.48
SMG8-201ENST00000300917 RXFP4Q8TDU9 374 aa12.03□□□□□ -0.48
SMG8-201ENST00000300917 S1PR3Q99500 378 aa12.03□□□□□ -0.48
SMG8-201ENST00000300917 SEC11CQ9BY50 192 aa12.03□□□□□ -0.48
SMG8-201ENST00000300917 RPRMQ9NS64 109 aa12.03□□□□□ -0.48
SMG8-201ENST00000300917 JPT1Q9UK76 154 aa12.03□□□□□ -0.48
SMG8-201ENST00000300917 ZNF835Q9Y2P0 537 aa12.03□□□□□ -0.48
SMG8-201ENST00000300917 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP12.03□□□□□ -0.48
SMG8-201ENST00000300917 TAS2R30P59541 319 aa12.03□□□□□ -0.48
SMG8-201ENST00000300917 ZNF561Q8N587 486 aa12.03□□□□□ -0.48
SMG8-201ENST00000300917 RPS10P5Q9NQ39 176 aa12.03□□□□□ -0.48
SMG8-201ENST00000300917 PUS1Q9Y606 427 aaKnown RBP eCLIP12.03□□□□□ -0.48
SMG8-201ENST00000300917 HCFC1P51610 2035 aa12.03□□□□□ -0.48
SMG8-201ENST00000300917 RAI1Q7Z5J4 1906 aaPredicted RBP12.02□□□□□ -0.48
SMG8-201ENST00000300917 SVEP1Q4LDE5 3571 aa12.02□□□□□ -0.48
SMG8-201ENST00000300917 KBTBD11-OT1A0A1B0GTJ5 212 aa12.02□□□□□ -0.48
SMG8-201ENST00000300917 SMCO3A2RU48 225 aa12.02□□□□□ -0.48
SMG8-201ENST00000300917 ZFP92A6NM28 416 aa12.02□□□□□ -0.48
SMG8-201ENST00000300917 DFFBO76075 338 aa12.02□□□□□ -0.48
SMG8-201ENST00000300917 LY6HO94772 140 aa12.02□□□□□ -0.48
SMG8-201ENST00000300917 SLC25A6P12236 298 aa12.02□□□□□ -0.48
SMG8-201ENST00000300917 MMP9P14780 707 aa12.02□□□□□ -0.48
SMG8-201ENST00000300917 TNFRSF1AP19438 455 aa12.02□□□□□ -0.48
SMG8-201ENST00000300917 SLC25A10Q9UBX3 287 aaPredicted RBP12.02□□□□□ -0.48
SMG8-201ENST00000300917 STRAPQ9Y3F4 350 aaKnown RBP12.02□□□□□ -0.48
SMG8-201ENST00000300917 MALRD1Q5VYJ5 2156 aa12.02□□□□□ -0.49
SMG8-201ENST00000300917 ITPR1Q14643 2758 aa12.02□□□□□ -0.49
SMG8-201ENST00000300917 GATA4P43694 442 aa12.02□□□□□ -0.49
SMG8-201ENST00000300917 HBG1P69891 147 aa12.02□□□□□ -0.49
SMG8-201ENST00000300917 HBG2P69892 147 aa12.02□□□□□ -0.49
SMG8-201ENST00000300917 NUP37Q8NFH4 326 aa12.02□□□□□ -0.49
SMG8-201ENST00000300917 GNPNAT1Q96EK6 184 aaPredicted RBP12.02□□□□□ -0.49
SMG8-201ENST00000300917 GNG13Q9P2W3 67 aa12.02□□□□□ -0.49
SMG8-201ENST00000300917 NUDT19A8MXV4 375 aa12.01□□□□□ -0.49
SMG8-201ENST00000300917 SNAPINO95295 136 aa12.01□□□□□ -0.49
SMG8-201ENST00000300917 B2MP61769 119 aa12.01□□□□□ -0.49
SMG8-201ENST00000300917 RPL31P62899 125 aaKnown RBP12.01□□□□□ -0.49
SMG8-201ENST00000300917 MRPS11P82912 194 aaKnown RBP12.01□□□□□ -0.49
SMG8-201ENST00000300917 SPSB3Q6PJ21 355 aa12.01□□□□□ -0.49
SMG8-201ENST00000300917 ZNF66Q6ZN08 573 aa12.01□□□□□ -0.49
SMG8-201ENST00000300917 ZNF788Q6ZQV5 615 aa12.01□□□□□ -0.49
SMG8-201ENST00000300917 SSX7Q7RTT5 188 aa12.01□□□□□ -0.49
SMG8-201ENST00000300917 OR4A16Q8NH70 328 aa12.01□□□□□ -0.49
SMG8-201ENST00000300917 GFOD1Q9NXC2 390 aa12.01□□□□□ -0.49
SMG8-201ENST00000300917 HSPB7Q9UBY9 170 aa12.01□□□□□ -0.49
SMG8-201ENST00000300917 UMAD1C9J7I0 102 aa12.01□□□□□ -0.49
SMG8-201ENST00000300917 YPEL1O60688 119 aa12.01□□□□□ -0.49
SMG8-201ENST00000300917 C1QTNF9P0C862 333 aa12.01□□□□□ -0.49
SMG8-201ENST00000300917 BTF3P20290 206 aaKnown RBP12.01□□□□□ -0.49
SMG8-201ENST00000300917 PEA15Q15121 130 aa12.01□□□□□ -0.49
SMG8-201ENST00000300917 ISOC2Q96AB3 205 aa12.01□□□□□ -0.49
SMG8-201ENST00000300917 YPEL2Q96QA6 119 aa12.01□□□□□ -0.49
SMG8-201ENST00000300917 IFNA10P01566 189 aa12.01□□□□□ -0.49
SMG8-201ENST00000300917 RAB5CP51148 216 aa12.01□□□□□ -0.49
SMG8-201ENST00000300917 TFF3Q07654 80 aa12.01□□□□□ -0.49
SMG8-201ENST00000300917 TRAT1Q6PIZ9 186 aa12.01□□□□□ -0.49
SMG8-201ENST00000300917 SDSLQ96GA7 329 aa12.01□□□□□ -0.49
SMG8-201ENST00000300917 RBM14Q96PK6 669 aaKnown RBP12.01□□□□□ -0.49
SMG8-201ENST00000300917 CARHSP1Q9Y2V2 147 aaKnown RBP12.01□□□□□ -0.49
SMG8-201ENST00000300917 HIVEP3Q5T1R4 2406 aa12□□□□□ -0.49
SMG8-201ENST00000300917 MAP1AP78559 2803 aaPredicted RBP12□□□□□ -0.49
SMG8-201ENST00000300917 SHISA9B4DS77 424 aa12□□□□□ -0.49
SMG8-201ENST00000300917 FAM157AC9JC47 383 aa12□□□□□ -0.49
SMG8-201ENST00000300917 FCN3O75636 299 aa12□□□□□ -0.49
SMG8-201ENST00000300917 ABHD12Q8N2K0 398 aa12□□□□□ -0.49
SMG8-201ENST00000300917 CLRN3Q8NCR9 226 aa12□□□□□ -0.49
SMG8-201ENST00000300917 LYPD6BQ8NI32 183 aa12□□□□□ -0.49
SMG8-201ENST00000300917 RNASE6Q93091 150 aaKnown RBP12□□□□□ -0.49
SMG8-201ENST00000300917 SCRT1Q9BWW7 348 aa12□□□□□ -0.49
SMG8-201ENST00000300917 HEYLQ9NQ87 328 aaPredicted RBP12□□□□□ -0.49
SMG8-201ENST00000300917 COL8A2P25067 703 aa12□□□□□ -0.49
SMG8-201ENST00000300917 CASP6P55212 293 aa12□□□□□ -0.49
SMG8-201ENST00000300917 C3orf36Q3SXR2 165 aa12□□□□□ -0.49
SMG8-201ENST00000300917 JKAMPQ9P055 326 aa12□□□□□ -0.49
SMG8-201ENST00000300917 PRELID3BQ9Y3B1 194 aa12□□□□□ -0.49
SMG8-201ENST00000300917 PPIAL4EA0A075B759 164 aa11.99□□□□□ -0.49
SMG8-201ENST00000300917 PPIAL4DF5H284 164 aa11.99□□□□□ -0.49
SMG8-201ENST00000300917 F2RL2O00254 374 aa11.99□□□□□ -0.49
SMG8-201ENST00000300917 PPIAL4FP0DN26 164 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms