RNA–Protein interactions for RNA: ENST00000300590.7

SNX20-201, Transcript of sorting nexin 20, humanhuman

TSL 2 BASIC

Gene SNX20, Length 3,304 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX20-201ENST00000300590 C1orf174Q8IYL3 243 aa9.25□□□□□ -0.93
SNX20-201ENST00000300590 CORO2AQ92828 525 aa9.25□□□□□ -0.93
SNX20-201ENST00000300590 LSM10Q969L4 123 aaKnown RBP9.25□□□□□ -0.93
SNX20-201ENST00000300590 RNF2Q99496 336 aa9.25□□□□□ -0.93
SNX20-201ENST00000300590 REPIN1Q9BWE0 567 aaKnown RBP9.25□□□□□ -0.93
SNX20-201ENST00000300590 QTRT1Q9BXR0 403 aaKnown RBP9.25□□□□□ -0.93
SNX20-201ENST00000300590 TP73-AS1Q9UF72 201 aa9.25□□□□□ -0.93
SNX20-201ENST00000300590 SELENOKQ9Y6D0 94 aa9.25□□□□□ -0.93
SNX20-201ENST00000300590 C5orf67F2Z3F1 127 aa9.25□□□□□ -0.93
SNX20-201ENST00000300590 GPX1P07203 203 aa9.25□□□□□ -0.93
SNX20-201ENST00000300590 ARL14EPLP0DKL9 152 aa9.25□□□□□ -0.93
SNX20-201ENST00000300590 TIMP3P35625 211 aa9.25□□□□□ -0.93
SNX20-201ENST00000300590 RIPPLY3P57055 190 aa9.25□□□□□ -0.93
SNX20-201ENST00000300590 FXYD3Q14802 87 aa9.25□□□□□ -0.93
SNX20-201ENST00000300590 RNPS1Q15287 305 aaKnown RBP9.25□□□□□ -0.93
SNX20-201ENST00000300590 ACSF3Q4G176 576 aaPredicted RBP9.25□□□□□ -0.93
SNX20-201ENST00000300590 DRAM1Q8N682 238 aa9.25□□□□□ -0.93
SNX20-201ENST00000300590 PLPPR2Q96GM1 343 aa9.25□□□□□ -0.93
SNX20-201ENST00000300590 UBE2ZQ9H832 354 aaPredicted RBP9.25□□□□□ -0.93
SNX20-201ENST00000300590 MMP17Q9ULZ9 603 aa9.25□□□□□ -0.93
SNX20-201ENST00000300590 OR6C6A6NF89 314 aa9.25□□□□□ -0.93
SNX20-201ENST00000300590 PDE6DO43924 150 aa9.25□□□□□ -0.93
SNX20-201ENST00000300590 VAMP5O95183 116 aa9.25□□□□□ -0.93
SNX20-201ENST00000300590 NGFP01138 241 aa9.25□□□□□ -0.93
SNX20-201ENST00000300590 IGLC2P0DOY2 106 aa9.25□□□□□ -0.93
SNX20-201ENST00000300590 IGLC3P0DOY3 106 aa9.25□□□□□ -0.93
SNX20-201ENST00000300590 YPEL3P61236 119 aaPredicted RBP9.25□□□□□ -0.93
SNX20-201ENST00000300590 MRPL54Q6P161 138 aaKnown RBP9.25□□□□□ -0.93
SNX20-201ENST00000300590 ST6GALNAC6Q969X2 333 aa9.25□□□□□ -0.93
SNX20-201ENST00000300590 BET1LQ9NYM9 111 aa9.25□□□□□ -0.93
SNX20-201ENST00000300590 TRAV24A0A0B4J272 114 aa9.24□□□□□ -0.93
SNX20-201ENST00000300590 TMEM238C9JI98 176 aa9.24□□□□□ -0.93
SNX20-201ENST00000300590 DEGS1O15121 323 aa9.24□□□□□ -0.93
SNX20-201ENST00000300590 RHBDL1O75783 438 aa9.24□□□□□ -0.93
SNX20-201ENST00000300590 IGLV2-14P01704 120 aa9.24□□□□□ -0.93
SNX20-201ENST00000300590 GCNT2Q8N0V5 402 aa9.24□□□□□ -0.93
SNX20-201ENST00000300590 LIN7CQ9NUP9 197 aaKnown RBP9.24□□□□□ -0.93
SNX20-201ENST00000300590 SLC45A2Q9UMX9 530 aa9.24□□□□□ -0.93
SNX20-201ENST00000300590 CHCHD2Q9Y6H1 151 aaPredicted RBP9.24□□□□□ -0.93
SNX20-201ENST00000300590 ODAMA1E959 279 aa9.24□□□□□ -0.93
SNX20-201ENST00000300590 SCRG1O75711 98 aa9.24□□□□□ -0.93
SNX20-201ENST00000300590 CLDN14O95500 239 aa9.24□□□□□ -0.93
SNX20-201ENST00000300590 FOXL2NBQ6ZUU3 175 aa9.24□□□□□ -0.93
SNX20-201ENST00000300590 SSMEM1Q8WWF3 244 aa9.24□□□□□ -0.93
SNX20-201ENST00000300590 DLL3Q9NYJ7 618 aa9.24□□□□□ -0.93
SNX20-201ENST00000300590 DPRXA6NFQ7 191 aa9.23□□□□□ -0.93
SNX20-201ENST00000300590 ZIC3O60481 467 aa9.23□□□□□ -0.93
SNX20-201ENST00000300590 C3orf79P0CE67 100 aa9.23□□□□□ -0.93
SNX20-201ENST00000300590 CCR5P51681 352 aa9.23□□□□□ -0.93
SNX20-201ENST00000300590 VASH2Q86V25 355 aa9.23□□□□□ -0.93
SNX20-201ENST00000300590 NCOR1P1Q9H4R4 102 aa9.23□□□□□ -0.93
SNX20-201ENST00000300590 SERTAD4Q9NUC0 356 aa9.23□□□□□ -0.93
SNX20-201ENST00000300590 TIMM9Q9Y5J7 89 aa9.23□□□□□ -0.93
SNX20-201ENST00000300590 LMO7DNF2Z398 122 aa9.23□□□□□ -0.93
SNX20-201ENST00000300590 S1PR2O95136 353 aa9.23□□□□□ -0.93
SNX20-201ENST00000300590 SYNGR4O95473 234 aa9.23□□□□□ -0.93
SNX20-201ENST00000300590 GFRA1P56159 465 aa9.23□□□□□ -0.93
SNX20-201ENST00000300590 RPL31P62899 125 aaKnown RBP9.23□□□□□ -0.93
SNX20-201ENST00000300590 PSG7Q13046 419 aa9.23□□□□□ -0.93
SNX20-201ENST00000300590 MRPL52Q86TS9 123 aaKnown RBP9.23□□□□□ -0.93
SNX20-201ENST00000300590 MMD2Q8IY49 270 aa9.23□□□□□ -0.93
SNX20-201ENST00000300590 MRGPRDQ8TDS7 321 aa9.23□□□□□ -0.93
SNX20-201ENST00000300590 ORAOV1Q8WV07 137 aa9.23□□□□□ -0.93
SNX20-201ENST00000300590 BCL2L2Q92843 193 aaPredicted RBP9.23□□□□□ -0.93
SNX20-201ENST00000300590 LOXL4Q96JB6 756 aa9.23□□□□□ -0.93
SNX20-201ENST00000300590 GSX1Q9H4S2 264 aaPredicted RBP9.23□□□□□ -0.93
SNX20-201ENST00000300590 LOC105371242A0A075B767 164 aa9.23□□□□□ -0.93
SNX20-201ENST00000300590 HSBP1L1C9JCN9 74 aa9.23□□□□□ -0.93
SNX20-201ENST00000300590 C17orf112F2Z3M2 114 aa9.23□□□□□ -0.93
SNX20-201ENST00000300590 PIAS2O75928 621 aa9.23□□□□□ -0.93
SNX20-201ENST00000300590 SRIP30626 198 aa9.23□□□□□ -0.93
SNX20-201ENST00000300590 RELBQ01201 579 aa9.23□□□□□ -0.93
SNX20-201ENST00000300590 PDLIM3Q53GG5 364 aaPredicted RBP9.23□□□□□ -0.93
SNX20-201ENST00000300590 Q56UQ5 140 aa9.23□□□□□ -0.93
SNX20-201ENST00000300590 SPATA46Q5T0L3 261 aa9.23□□□□□ -0.93
SNX20-201ENST00000300590 MIC13Q5XKP0 118 aa9.23□□□□□ -0.93
SNX20-201ENST00000300590 ABHD3Q8WU67 409 aa9.23□□□□□ -0.93
SNX20-201ENST00000300590 C19orf25Q9UFG5 118 aaPredicted RBP9.23□□□□□ -0.93
SNX20-201ENST00000300590 K7EN84 100 aa9.22□□□□□ -0.93
SNX20-201ENST00000300590 DUSP3P51452 185 aaPredicted RBP9.22□□□□□ -0.93
SNX20-201ENST00000300590 RPL30P62888 115 aaKnown RBP9.22□□□□□ -0.93
SNX20-201ENST00000300590 PRR27Q6MZM9 219 aa9.22□□□□□ -0.93
SNX20-201ENST00000300590 C16orf54Q6UWD8 224 aa9.22□□□□□ -0.93
SNX20-201ENST00000300590 DOLPP1Q86YN1 238 aa9.22□□□□□ -0.93
SNX20-201ENST00000300590 FAM58AQ8N1B3 248 aa9.22□□□□□ -0.93
SNX20-201ENST00000300590 BORCS7Q96B45 105 aa9.22□□□□□ -0.93
SNX20-201ENST00000300590 CRISPLD2Q9H0B8 497 aa9.22□□□□□ -0.93
SNX20-201ENST00000300590 FAM234AQ9H0X4 552 aa9.22□□□□□ -0.93
SNX20-201ENST00000300590 OR2D2Q9H210 308 aa9.22□□□□□ -0.93
SNX20-201ENST00000300590 IL36BQ9NZH7 164 aa9.22□□□□□ -0.93
SNX20-201ENST00000300590 DNAJC13O75165 2243 aa9.22□□□□□ -0.93
SNX20-201ENST00000300590 CD99P14209 185 aa9.22□□□□□ -0.93
SNX20-201ENST00000300590 ZNF83P51522 516 aa9.22□□□□□ -0.93
SNX20-201ENST00000300590 SRYQ05066 204 aa9.22□□□□□ -0.93
SNX20-201ENST00000300590 LTC4SQ16873 150 aa9.22□□□□□ -0.93
SNX20-201ENST00000300590 Q6ZS49 121 aa9.22□□□□□ -0.93
SNX20-201ENST00000300590 Q8N976 141 aa9.22□□□□□ -0.93
SNX20-201ENST00000300590 FADS6Q8N9I5 356 aa9.22□□□□□ -0.93
SNX20-201ENST00000300590 CTNNBIP1Q9NSA3 81 aaPredicted RBP9.22□□□□□ -0.93
SNX20-201ENST00000300590 COX11Q9Y6N1 276 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms