RNA–Protein interactions for RNA: ENST00000299543.8

CTDP1-202, Transcript of CTD phosphatase subunit 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CTDP1, Length 3,380 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1-202ENST00000299543 ZFHX4Q86UP3 3567 aa11.34□□□□□ -0.59
CTDP1-202ENST00000299543 CLEC18AA5D8T8 446 aa11.33□□□□□ -0.6
CTDP1-202ENST00000299543 GABRA2P47869 451 aa11.33□□□□□ -0.6
CTDP1-202ENST00000299543 PPP1CBP62140 327 aa11.33□□□□□ -0.6
CTDP1-202ENST00000299543 AESQ08117 197 aa11.33□□□□□ -0.6
CTDP1-202ENST00000299543 FAM90A2PQ658T7 463 aa11.33□□□□□ -0.6
CTDP1-202ENST00000299543 DEFB123Q8N688 67 aa11.33□□□□□ -0.6
CTDP1-202ENST00000299543 CLEC18CQ8NCF0 446 aa11.33□□□□□ -0.6
CTDP1-202ENST00000299543 OR4C5Q8NGB2 326 aa11.33□□□□□ -0.6
CTDP1-202ENST00000299543 SLC25A40Q8TBP6 338 aa11.33□□□□□ -0.6
CTDP1-202ENST00000299543 NANOS1Q8WY41 292 aaKnown RBP11.33□□□□□ -0.6
CTDP1-202ENST00000299543 OR4C12Q96R67 309 aa11.33□□□□□ -0.6
CTDP1-202ENST00000299543 ZPBPQ9BS86 351 aa11.33□□□□□ -0.6
CTDP1-202ENST00000299543 VAMP8Q9BV40 100 aa11.33□□□□□ -0.6
CTDP1-202ENST00000299543 TMEM265A0A087WTH1 108 aa11.33□□□□□ -0.6
CTDP1-202ENST00000299543 TRGV5A0A0B4J1U4 118 aa11.33□□□□□ -0.6
CTDP1-202ENST00000299543 CD46P15529 392 aa11.33□□□□□ -0.6
CTDP1-202ENST00000299543 KRTDAPP60985 99 aa11.33□□□□□ -0.6
CTDP1-202ENST00000299543 RNFT1Q5M7Z0 435 aa11.33□□□□□ -0.6
CTDP1-202ENST00000299543 Q6ZS49 121 aa11.33□□□□□ -0.6
CTDP1-202ENST00000299543 WDR86Q86TI4 376 aa11.33□□□□□ -0.6
CTDP1-202ENST00000299543 FGFRL1Q8N441 504 aa11.33□□□□□ -0.6
CTDP1-202ENST00000299543 OR52L2PQ8NGH6 319 aa11.33□□□□□ -0.6
CTDP1-202ENST00000299543 RPH3ALQ9UNE2 315 aa11.33□□□□□ -0.6
CTDP1-202ENST00000299543 KLF13Q9Y2Y9 288 aaPredicted RBP11.33□□□□□ -0.6
CTDP1-202ENST00000299543 PCSK5Q92824 1860 aa11.33□□□□□ -0.6
CTDP1-202ENST00000299543 OPN1MWP04001 364 aa11.33□□□□□ -0.6
CTDP1-202ENST00000299543 OPN1MW2P0DN77 364 aa11.33□□□□□ -0.6
CTDP1-202ENST00000299543 OPN1MW3P0DN78 364 aa11.33□□□□□ -0.6
CTDP1-202ENST00000299543 FABP6P51161 128 aa11.33□□□□□ -0.6
CTDP1-202ENST00000299543 COL5A1-AS1Q5SY13 56 aa11.33□□□□□ -0.6
CTDP1-202ENST00000299543 S100A7AQ86SG5 101 aa11.33□□□□□ -0.6
CTDP1-202ENST00000299543 DRAM1Q8N682 238 aa11.33□□□□□ -0.6
CTDP1-202ENST00000299543 FAM234AQ9H0X4 552 aa11.33□□□□□ -0.6
CTDP1-202ENST00000299543 OR2D2Q9H210 308 aa11.33□□□□□ -0.6
CTDP1-202ENST00000299543 SLC39A9Q9NUM3 307 aa11.33□□□□□ -0.6
CTDP1-202ENST00000299543 KCNIP1Q9NZI2 227 aa11.33□□□□□ -0.6
CTDP1-202ENST00000299543 KIR2DL5BA0A0G2JN68 375 aa11.32□□□□□ -0.6
CTDP1-202ENST00000299543 KIR2DL5BA0A0G2JPC4 375 aa11.32□□□□□ -0.6
CTDP1-202ENST00000299543 DUXBA0A1W2PPF3 345 aa11.32□□□□□ -0.6
CTDP1-202ENST00000299543 M0QZK8 103 aa11.32□□□□□ -0.6
CTDP1-202ENST00000299543 SH2D1BO14796 132 aa11.32□□□□□ -0.6
CTDP1-202ENST00000299543 RAMP3O60896 148 aa11.32□□□□□ -0.6
CTDP1-202ENST00000299543 GGCTO75223 188 aaKnown RBP11.32□□□□□ -0.6
CTDP1-202ENST00000299543 CDKN1AP38936 164 aa11.32□□□□□ -0.6
CTDP1-202ENST00000299543 HBG1P69891 147 aa11.32□□□□□ -0.6
CTDP1-202ENST00000299543 HBG2P69892 147 aa11.32□□□□□ -0.6
CTDP1-202ENST00000299543 MRPL49Q13405 166 aaKnown RBP11.32□□□□□ -0.6
CTDP1-202ENST00000299543 KIR2DL5AQ8N109 375 aa11.32□□□□□ -0.6
CTDP1-202ENST00000299543 CLN8Q9UBY8 286 aa11.32□□□□□ -0.6
CTDP1-202ENST00000299543 TPRP12270 2363 aaKnown RBP11.32□□□□□ -0.6
CTDP1-202ENST00000299543 DEFA4P12838 97 aa11.32□□□□□ -0.6
CTDP1-202ENST00000299543 VAMP3Q15836 100 aa11.32□□□□□ -0.6
CTDP1-202ENST00000299543 Q5PR19 223 aa11.32□□□□□ -0.6
CTDP1-202ENST00000299543 Q6P435 159 aa11.32□□□□□ -0.6
CTDP1-202ENST00000299543 ZNF295-AS1Q8N0V1 137 aa11.32□□□□□ -0.6
CTDP1-202ENST00000299543 STPG4Q8N801 248 aa11.32□□□□□ -0.6
CTDP1-202ENST00000299543 MRGPRDQ8TDS7 321 aa11.32□□□□□ -0.6
CTDP1-202ENST00000299543 LHX4Q969G2 390 aa11.32□□□□□ -0.6
CTDP1-202ENST00000299543 WDYHV1Q96HA8 205 aa11.32□□□□□ -0.6
CTDP1-202ENST00000299543 NDUFB8O95169 186 aa11.31□□□□□ -0.6
CTDP1-202ENST00000299543 HSPB1P04792 205 aaKnown RBP11.31□□□□□ -0.6
CTDP1-202ENST00000299543 OR10J1P30954 320 aa11.31□□□□□ -0.6
CTDP1-202ENST00000299543 HINT1P49773 126 aaPredicted RBP11.31□□□□□ -0.6
CTDP1-202ENST00000299543 ZNF585BQ52M93 769 aa11.31□□□□□ -0.6
CTDP1-202ENST00000299543 ZNF506Q5JVG8 444 aa11.31□□□□□ -0.6
CTDP1-202ENST00000299543 GBGT1Q8N5D6 347 aa11.31□□□□□ -0.6
CTDP1-202ENST00000299543 BCL2L2Q92843 193 aaPredicted RBP11.31□□□□□ -0.6
CTDP1-202ENST00000299543 GUCD1Q96NT3 240 aa11.31□□□□□ -0.6
CTDP1-202ENST00000299543 SLC25A22Q9H936 323 aa11.31□□□□□ -0.6
CTDP1-202ENST00000299543 EDDM3AQ14507 147 aa11.31□□□□□ -0.6
CTDP1-202ENST00000299543 LYG1Q8N1E2 194 aa11.31□□□□□ -0.6
CTDP1-202ENST00000299543 NINJ1Q92982 152 aa11.31□□□□□ -0.6
CTDP1-202ENST00000299543 TMEM9BQ9NQ34 198 aa11.31□□□□□ -0.6
CTDP1-202ENST00000299543 LIN7CQ9NUP9 197 aaKnown RBP11.31□□□□□ -0.6
CTDP1-202ENST00000299543 KIAA1324LA8MWY0 1029 aaPredicted RBP11.31□□□□□ -0.6
CTDP1-202ENST00000299543 PSPNO60542 156 aa11.31□□□□□ -0.6
CTDP1-202ENST00000299543 WISP2O76076 250 aa11.31□□□□□ -0.6
CTDP1-202ENST00000299543 RAC2P15153 192 aa11.31□□□□□ -0.6
CTDP1-202ENST00000299543 SLC38A11Q08AI6 406 aa11.31□□□□□ -0.6
CTDP1-202ENST00000299543 ZNF525Q8N782 197 aa11.31□□□□□ -0.6
CTDP1-202ENST00000299543 TRIB1Q96RU8 372 aa11.31□□□□□ -0.6
CTDP1-202ENST00000299543 SPRR3Q9UBC9 169 aa11.31□□□□□ -0.6
CTDP1-202ENST00000299543 POLDIP2Q9Y2S7 368 aa11.31□□□□□ -0.6
CTDP1-202ENST00000299543 MAP1LC3B2A6NCE7 125 aa11.3□□□□□ -0.6
CTDP1-202ENST00000299543 CCL11P51671 97 aa11.3□□□□□ -0.6
CTDP1-202ENST00000299543 ZNF766Q5HY98 468 aa11.3□□□□□ -0.6
CTDP1-202ENST00000299543 PRAMEF6Q5VXH4 476 aa11.3□□□□□ -0.6
CTDP1-202ENST00000299543 ABHD14BQ96IU4 210 aa11.3□□□□□ -0.6
CTDP1-202ENST00000299543 MAP1LC3BQ9GZQ8 125 aa11.3□□□□□ -0.6
CTDP1-202ENST00000299543 LRP5LA4QPB2 252 aa11.3□□□□□ -0.6
CTDP1-202ENST00000299543 HAND1O96004 215 aa11.3□□□□□ -0.6
CTDP1-202ENST00000299543 OR5G3P0C626 314 aa11.3□□□□□ -0.6
CTDP1-202ENST00000299543 MDH2P40926 338 aaKnown RBP11.3□□□□□ -0.6
CTDP1-202ENST00000299543 PSG7Q13046 419 aa11.3□□□□□ -0.6
CTDP1-202ENST00000299543 ZNF726P1Q15940 193 aa11.3□□□□□ -0.6
CTDP1-202ENST00000299543 PEAR1Q5VY43 1037 aaPredicted RBP11.3□□□□□ -0.6
CTDP1-202ENST00000299543 HAPLN4Q86UW8 402 aa11.3□□□□□ -0.6
CTDP1-202ENST00000299543 PRO3102Q9H379 93 aa11.3□□□□□ -0.6
CTDP1-202ENST00000299543 VAX2Q9UIW0 290 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms