RNA–Protein interactions for RNA: ENST00000296215.7

SNIP1-201, Transcript of Smad nuclear interacting protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNIP1, Length 4,605 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-201ENST00000296215 MLNRO43193 412 aa10.06□□□□□ -0.8
SNIP1-201ENST00000296215 IGHG1P01857 330 aa10.06□□□□□ -0.8
SNIP1-201ENST00000296215 LILRA3Q8N6C8 439 aaPredicted RBP10.06□□□□□ -0.8
SNIP1-201ENST00000296215 OR1L8Q8NGR8 309 aa10.06□□□□□ -0.8
SNIP1-201ENST00000296215 CA6P23280 308 aa10.06□□□□□ -0.8
SNIP1-201ENST00000296215 PRELID3AQ96N28 172 aa10.06□□□□□ -0.8
SNIP1-201ENST00000296215 TMEM222Q9H0R3 208 aa10.06□□□□□ -0.8
SNIP1-201ENST00000296215 A0A1W2PRE2 83 aa10.06□□□□□ -0.8
SNIP1-201ENST00000296215 TMEM155Q4W5P6 130 aa10.06□□□□□ -0.8
SNIP1-201ENST00000296215 C1orf100Q5SVJ3 147 aa10.06□□□□□ -0.8
SNIP1-201ENST00000296215 PAQR4Q8N4S7 273 aaPredicted RBP10.06□□□□□ -0.8
SNIP1-201ENST00000296215 CNRIP1Q96F85 164 aaPredicted RBP10.06□□□□□ -0.8
SNIP1-201ENST00000296215 S1PR5Q9H228 398 aa10.06□□□□□ -0.8
SNIP1-201ENST00000296215 PTPRZ1P23471 2315 aaPredicted RBP10.06□□□□□ -0.8
SNIP1-201ENST00000296215 H3BML4 177 aa10.05□□□□□ -0.8
SNIP1-201ENST00000296215 HOXA3O43365 443 aaPredicted RBP10.05□□□□□ -0.8
SNIP1-201ENST00000296215 NUPR1O60356 82 aa10.05□□□□□ -0.8
SNIP1-201ENST00000296215 UPK3AO75631 287 aa10.05□□□□□ -0.8
SNIP1-201ENST00000296215 GPR75O95800 540 aa10.05□□□□□ -0.8
SNIP1-201ENST00000296215 ATP5G3P48201 142 aa10.05□□□□□ -0.8
SNIP1-201ENST00000296215 OR10J6PQ8NGY7 276 aa10.05□□□□□ -0.8
SNIP1-201ENST00000296215 LRRC29Q8WV35 223 aa10.05□□□□□ -0.8
SNIP1-201ENST00000296215 SPANXCQ9NY87 97 aa10.05□□□□□ -0.8
SNIP1-201ENST00000296215 V9GYY9 64 aa10.05□□□□□ -0.8
SNIP1-201ENST00000296215 KNTC1P50748 2209 aa10.05□□□□□ -0.8
SNIP1-201ENST00000296215 ASCC3Q8N3C0 2202 aaKnown RBP10.05□□□□□ -0.8
SNIP1-201ENST00000296215 PTGESO14684 152 aa10.05□□□□□ -0.8
SNIP1-201ENST00000296215 TXNDC8Q6A555 127 aa10.05□□□□□ -0.8
SNIP1-201ENST00000296215 C3orf56Q8N813 242 aa10.05□□□□□ -0.8
SNIP1-201ENST00000296215 IRF7Q92985 503 aa10.05□□□□□ -0.8
SNIP1-201ENST00000296215 NAT6Q93015 286 aa10.05□□□□□ -0.8
SNIP1-201ENST00000296215 ABHD17AQ96GS6 310 aa10.05□□□□□ -0.8
SNIP1-201ENST00000296215 TRAV2A0A0B4J234 112 aa10.05□□□□□ -0.8
SNIP1-201ENST00000296215 ADM5C9JUS6 153 aa10.05□□□□□ -0.8
SNIP1-201ENST00000296215 CA3P07451 260 aa10.05□□□□□ -0.8
SNIP1-201ENST00000296215 DCAF12Q5T6F0 453 aa10.05□□□□□ -0.8
SNIP1-201ENST00000296215 RFLNAQ6ZTI6 216 aa10.05□□□□□ -0.8
SNIP1-201ENST00000296215 C9orf40Q8IXQ3 194 aa10.05□□□□□ -0.8
SNIP1-201ENST00000296215 OSR2Q8N2R0 312 aa10.05□□□□□ -0.8
SNIP1-201ENST00000296215 SSMEM1Q8WWF3 244 aa10.05□□□□□ -0.8
SNIP1-201ENST00000296215 ZNFX1Q9P2E3 1918 aaKnown RBP10.05□□□□□ -0.8
SNIP1-201ENST00000296215 NAPSAO96009 420 aa10.05□□□□□ -0.8
SNIP1-201ENST00000296215 SLC25A5P05141 298 aaKnown RBP10.05□□□□□ -0.8
SNIP1-201ENST00000296215 FSTP19883 344 aa10.05□□□□□ -0.8
SNIP1-201ENST00000296215 RPL34P49207 117 aaKnown RBP10.05□□□□□ -0.8
SNIP1-201ENST00000296215 ERVK11-1P61568 191 aa10.05□□□□□ -0.8
SNIP1-201ENST00000296215 CENPWQ5EE01 88 aa10.05□□□□□ -0.8
SNIP1-201ENST00000296215 F5H768 121 aa10.04□□□□□ -0.8
SNIP1-201ENST00000296215 COL8A1P27658 744 aa10.04□□□□□ -0.8
SNIP1-201ENST00000296215 TIMP3P35625 211 aa10.04□□□□□ -0.8
SNIP1-201ENST00000296215 VDAC2P45880 294 aaPredicted RBP10.04□□□□□ -0.8
SNIP1-201ENST00000296215 CLDN17P56750 224 aa10.04□□□□□ -0.8
SNIP1-201ENST00000296215 HSPE1P61604 102 aaKnown RBP10.04□□□□□ -0.8
SNIP1-201ENST00000296215 EIF4EBP2Q13542 120 aaPredicted RBP10.04□□□□□ -0.8
SNIP1-201ENST00000296215 TMEM215Q68D42 235 aa10.04□□□□□ -0.8
SNIP1-201ENST00000296215 H1FNTQ75WM6 255 aaPredicted RBP10.04□□□□□ -0.8
SNIP1-201ENST00000296215 TMEM178AQ8NBL3 297 aa10.04□□□□□ -0.8
SNIP1-201ENST00000296215 GFI1Q99684 422 aa10.04□□□□□ -0.8
SNIP1-201ENST00000296215 RABAC1Q9UI14 185 aa10.04□□□□□ -0.8
SNIP1-201ENST00000296215 CACNA1GO43497 2377 aa10.04□□□□□ -0.8
SNIP1-201ENST00000296215 IGKV6-21A0A0C4DH24 114 aa10.04□□□□□ -0.8
SNIP1-201ENST00000296215 SPTBP11277 2137 aa10.04□□□□□ -0.8
SNIP1-201ENST00000296215 ZNF121P58317 390 aaPredicted RBP10.04□□□□□ -0.8
SNIP1-201ENST00000296215 PRDX1Q06830 199 aaKnown RBP10.04□□□□□ -0.8
SNIP1-201ENST00000296215 OR2H1Q9GZK4 316 aa10.04□□□□□ -0.8
SNIP1-201ENST00000296215 CFHR2P36980 270 aa10.04□□□□□ -0.8
SNIP1-201ENST00000296215 UBE2L3P68036 154 aaKnown RBP10.04□□□□□ -0.8
SNIP1-201ENST00000296215 SRSF2Q01130 221 aaKnown RBP10.04□□□□□ -0.8
SNIP1-201ENST00000296215 MYOZ3Q8TDC0 251 aa10.04□□□□□ -0.8
SNIP1-201ENST00000296215 DDIT4LQ96D03 193 aa10.04□□□□□ -0.8
SNIP1-201ENST00000296215 COL16A1Q07092 1604 aaPredicted RBP10.04□□□□□ -0.8
SNIP1-201ENST00000296215 XIRP1Q702N8 1843 aaKnown RBP10.04□□□□□ -0.8
SNIP1-201ENST00000296215 HOXB2P14652 356 aa10.03□□□□□ -0.8
SNIP1-201ENST00000296215 GABRG2P18507 467 aa10.03□□□□□ -0.8
SNIP1-201ENST00000296215 HBBP68871 147 aa10.03□□□□□ -0.8
SNIP1-201ENST00000296215 ZXDAP98168 799 aa10.03□□□□□ -0.8
SNIP1-201ENST00000296215 TBC1D28Q2M2D7 210 aa10.03□□□□□ -0.8
SNIP1-201ENST00000296215 OCC1Q8TAD7 63 aa10.03□□□□□ -0.8
SNIP1-201ENST00000296215 CT55Q8WUE5 264 aa10.03□□□□□ -0.8
SNIP1-201ENST00000296215 NABP2Q9BQ15 211 aa10.03□□□□□ -0.8
SNIP1-201ENST00000296215 FAM234AQ9H0X4 552 aa10.03□□□□□ -0.8
SNIP1-201ENST00000296215 FABP5P3A8MUU1 101 aa10.03□□□□□ -0.8
SNIP1-201ENST00000296215 B9A039 149 aa10.03□□□□□ -0.8
SNIP1-201ENST00000296215 SPRY1O43609 319 aaPredicted RBP10.03□□□□□ -0.8
SNIP1-201ENST00000296215 PDCD1Q15116 288 aa10.03□□□□□ -0.8
SNIP1-201ENST00000296215 PMVKQ15126 192 aa10.03□□□□□ -0.8
SNIP1-201ENST00000296215 EPDR1Q9UM22 224 aa10.03□□□□□ -0.8
SNIP1-201ENST00000296215 WDR81Q562E7 1941 aa10.03□□□□□ -0.8
SNIP1-201ENST00000296215 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP10.03□□□□□ -0.8
SNIP1-201ENST00000296215 SCN1AP35498 2009 aa10.03□□□□□ -0.8
SNIP1-201ENST00000296215 VEGFBP49765 207 aa10.03□□□□□ -0.8
SNIP1-201ENST00000296215 HSD11B1LQ7Z5J1 315 aa10.03□□□□□ -0.8
SNIP1-201ENST00000296215 TRAV24A0A0B4J272 114 aa10.03□□□□□ -0.8
SNIP1-201ENST00000296215 SCO2A0A1W2PP80 73 aa10.03□□□□□ -0.8
SNIP1-201ENST00000296215 IZUMO1RA6ND01 250 aa10.03□□□□□ -0.8
SNIP1-201ENST00000296215 SH2D7A6NKC9 451 aaPredicted RBP10.03□□□□□ -0.8
SNIP1-201ENST00000296215 FAM157AC9JC47 383 aa10.03□□□□□ -0.8
SNIP1-201ENST00000296215 H3BNC9 293 aa10.03□□□□□ -0.8
SNIP1-201ENST00000296215 TNFP01375 233 aa10.03□□□□□ -0.8
SNIP1-201ENST00000296215 ARL14EPLP0DKL9 152 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms