RNA–Protein interactions for RNA: ENST00000288976.3

PTPDC1-201, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPDC1, Length 4,398 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-201ENST00000288976 OPN4Q9UHM6 478 aa7.02□□□□□ -1.29
PTPDC1-201ENST00000288976 WNT9BO14905 357 aa7.01□□□□□ -1.29
PTPDC1-201ENST00000288976 ZNF737O75373 536 aa7.01□□□□□ -1.29
PTPDC1-201ENST00000288976 IGKV3-20P01619 116 aa7.01□□□□□ -1.29
PTPDC1-201ENST00000288976 COL10A1Q03692 680 aa7.01□□□□□ -1.29
PTPDC1-201ENST00000288976 ABHD1Q96SE0 405 aa7.01□□□□□ -1.29
PTPDC1-201ENST00000288976 WDR13Q9H1Z4 485 aa7.01□□□□□ -1.29
PTPDC1-201ENST00000288976 RPS10P5Q9NQ39 176 aa7.01□□□□□ -1.29
PTPDC1-201ENST00000288976 MTFP1Q9UDX5 166 aa7.01□□□□□ -1.29
PTPDC1-201ENST00000288976 MIOXQ9UGB7 285 aa7.01□□□□□ -1.29
PTPDC1-201ENST00000288976 KCNK7Q9Y2U2 307 aa7.01□□□□□ -1.29
PTPDC1-201ENST00000288976 NAPSAO96009 420 aa7.01□□□□□ -1.29
PTPDC1-201ENST00000288976 FCER1GP30273 86 aa7.01□□□□□ -1.29
PTPDC1-201ENST00000288976 BMI1P35226 326 aa7.01□□□□□ -1.29
PTPDC1-201ENST00000288976 SRPXP78539 464 aa7.01□□□□□ -1.29
PTPDC1-201ENST00000288976 RBPMS2Q6ZRY4 209 aaKnown RBP7.01□□□□□ -1.29
PTPDC1-201ENST00000288976 TMEM229BQ8NBD8 167 aa7.01□□□□□ -1.29
PTPDC1-201ENST00000288976 OR4B1Q8NGF8 309 aa7.01□□□□□ -1.29
PTPDC1-201ENST00000288976 AK3Q9UIJ7 227 aa7.01□□□□□ -1.29
PTPDC1-201ENST00000288976 ARG1P05089 322 aa7.01□□□□□ -1.29
PTPDC1-201ENST00000288976 COL8A2P25067 703 aa7.01□□□□□ -1.29
PTPDC1-201ENST00000288976 PAFAH1B2P68402 229 aa7.01□□□□□ -1.29
PTPDC1-201ENST00000288976 ZNF787Q6DD87 383 aa7.01□□□□□ -1.29
PTPDC1-201ENST00000288976 ALKAL2Q6UX46 152 aa7.01□□□□□ -1.29
PTPDC1-201ENST00000288976 HOGA1Q86XE5 327 aa7.01□□□□□ -1.29
PTPDC1-201ENST00000288976 OR1S2Q8NGQ3 325 aa7.01□□□□□ -1.29
PTPDC1-201ENST00000288976 NANPQ8TBE9 248 aa7.01□□□□□ -1.29
PTPDC1-201ENST00000288976 GRAMD2BQ96HH9 432 aa7.01□□□□□ -1.29
PTPDC1-201ENST00000288976 HARBI1Q96MB7 349 aa7.01□□□□□ -1.29
PTPDC1-201ENST00000288976 C19orf12Q9NSK7 152 aa7.01□□□□□ -1.29
PTPDC1-201ENST00000288976 IL36RNQ9UBH0 155 aa7.01□□□□□ -1.29
PTPDC1-201ENST00000288976 STRAPQ9Y3F4 350 aaKnown RBP7.01□□□□□ -1.29
PTPDC1-201ENST00000288976 NAP1L6A6NFF2 107 aa7.01□□□□□ -1.29
PTPDC1-201ENST00000288976 MGST3O14880 152 aa7.01□□□□□ -1.29
PTPDC1-201ENST00000288976 CR1LQ2VPA4 569 aa7.01□□□□□ -1.29
PTPDC1-201ENST00000288976 OR13D1Q8NGV5 346 aa7.01□□□□□ -1.29
PTPDC1-201ENST00000288976 PATZ1Q9HBE1 687 aaKnown RBP7.01□□□□□ -1.29
PTPDC1-201ENST00000288976 LIN7CQ9NUP9 197 aaKnown RBP7.01□□□□□ -1.29
PTPDC1-201ENST00000288976 AMMECR1Q9Y4X0 333 aaPredicted RBP7.01□□□□□ -1.29
PTPDC1-201ENST00000288976 ZNF705FA8MVS1 300 aaPredicted RBP7□□□□□ -1.29
PTPDC1-201ENST00000288976 VWC2LB2RUY7 222 aa7□□□□□ -1.29
PTPDC1-201ENST00000288976 K7N7A8 449 aa7□□□□□ -1.29
PTPDC1-201ENST00000288976 IGHV4-39P01824 125 aa7□□□□□ -1.29
PTPDC1-201ENST00000288976 CD74P04233 296 aa7□□□□□ -1.29
PTPDC1-201ENST00000288976 ZNF705DP0CH99 300 aaPredicted RBP7□□□□□ -1.29
PTPDC1-201ENST00000288976 ZNF705BP0CI00 300 aaPredicted RBP7□□□□□ -1.29
PTPDC1-201ENST00000288976 THBS3P49746 956 aa7□□□□□ -1.29
PTPDC1-201ENST00000288976 SLC35B1P78383 322 aa7□□□□□ -1.29
PTPDC1-201ENST00000288976 OR5R1Q8NH85 324 aa7□□□□□ -1.29
PTPDC1-201ENST00000288976 ANKRD20A5PA0PJZ0 165 aa7□□□□□ -1.29
PTPDC1-201ENST00000288976 MEF2CQ06413 473 aaPredicted RBP7□□□□□ -1.29
PTPDC1-201ENST00000288976 BATFQ16520 125 aa7□□□□□ -1.29
PTPDC1-201ENST00000288976 FAM201AQ5SY85 155 aa7□□□□□ -1.29
PTPDC1-201ENST00000288976 FAM122CQ6P4D5 195 aa7□□□□□ -1.29
PTPDC1-201ENST00000288976 PRSS57Q6UWY2 283 aa7□□□□□ -1.29
PTPDC1-201ENST00000288976 Q6ZNX1 250 aa7□□□□□ -1.29
PTPDC1-201ENST00000288976 C3orf56Q8N813 242 aa7□□□□□ -1.29
PTPDC1-201ENST00000288976 TAF9BQ9HBM6 251 aa7□□□□□ -1.29
PTPDC1-201ENST00000288976 FAM181BA6NEQ2 426 aa7□□□□□ -1.29
PTPDC1-201ENST00000288976 CD3DP04234 171 aa7□□□□□ -1.29
PTPDC1-201ENST00000288976 OR13C7P0DN81 318 aa7□□□□□ -1.29
PTPDC1-201ENST00000288976 SLC25A4P12235 298 aa7□□□□□ -1.29
PTPDC1-201ENST00000288976 TPT1P13693 172 aaKnown RBP7□□□□□ -1.29
PTPDC1-201ENST00000288976 GUCA2AQ02747 115 aa7□□□□□ -1.29
PTPDC1-201ENST00000288976 ASAH1Q13510 395 aa7□□□□□ -1.29
PTPDC1-201ENST00000288976 KLF9Q13886 244 aaPredicted RBP7□□□□□ -1.29
PTPDC1-201ENST00000288976 ADIRFQ15847 76 aa7□□□□□ -1.29
PTPDC1-201ENST00000288976 SUN5Q8TC36 379 aa7□□□□□ -1.29
PTPDC1-201ENST00000288976 MRPL30Q8TCC3 161 aaKnown RBP7□□□□□ -1.29
PTPDC1-201ENST00000288976 C1orf159Q96HA4 380 aa7□□□□□ -1.29
PTPDC1-201ENST00000288976 MED9Q9NWA0 146 aa7□□□□□ -1.29
PTPDC1-201ENST00000288976 URGCP-MRPS24S4R325 110 aa7□□□□□ -1.29
PTPDC1-201ENST00000288976 DBX1A6NMT0 343 aa6.99□□□□□ -1.29
PTPDC1-201ENST00000288976 NPIPB11E5RHQ5 1161 aa6.99□□□□□ -1.29
PTPDC1-201ENST00000288976 FCGR3AP08637 254 aa6.99□□□□□ -1.29
PTPDC1-201ENST00000288976 IL7P13232 177 aa6.99□□□□□ -1.29
PTPDC1-201ENST00000288976 COL8A1P27658 744 aa6.99□□□□□ -1.29
PTPDC1-201ENST00000288976 DGCR2P98153 550 aa6.99□□□□□ -1.29
PTPDC1-201ENST00000288976 LHX4Q969G2 390 aa6.99□□□□□ -1.29
PTPDC1-201ENST00000288976 LURAP1Q96LR2 239 aa6.99□□□□□ -1.29
PTPDC1-201ENST00000288976 TMEM147Q9BVK8 224 aa6.99□□□□□ -1.29
PTPDC1-201ENST00000288976 IGHV3-49A0A0A0MS15 119 aa6.99□□□□□ -1.29
PTPDC1-201ENST00000288976 CGB1A6NKQ9 187 aa6.99□□□□□ -1.29
PTPDC1-201ENST00000288976 A8MXK9 166 aa6.99□□□□□ -1.29
PTPDC1-201ENST00000288976 VDAC1P21796 283 aa6.99□□□□□ -1.29
PTPDC1-201ENST00000288976 OR10A7Q8NGE5 316 aa6.99□□□□□ -1.29
PTPDC1-201ENST00000288976 C8orf46Q8TAG6 207 aa6.99□□□□□ -1.29
PTPDC1-201ENST00000288976 LINC00574Q9H8X3 128 aa6.99□□□□□ -1.29
PTPDC1-201ENST00000288976 Q9N2K0 584 aa6.99□□□□□ -1.29
PTPDC1-201ENST00000288976 MBNL3Q9NUK0 354 aaKnown RBP6.99□□□□□ -1.29
PTPDC1-201ENST00000288976 UBQLN2Q9UHD9 624 aa6.99□□□□□ -1.29
PTPDC1-201ENST00000288976 SLC25A16P16260 332 aa6.99□□□□□ -1.29
PTPDC1-201ENST00000288976 EMP1P54849 157 aa6.99□□□□□ -1.29
PTPDC1-201ENST00000288976 CD300CQ08708 224 aa6.99□□□□□ -1.29
PTPDC1-201ENST00000288976 NRARPQ7Z6K4 114 aa6.99□□□□□ -1.29
PTPDC1-201ENST00000288976 OR5B3Q8NH48 314 aa6.99□□□□□ -1.29
PTPDC1-201ENST00000288976 AAMDCQ9H7C9 122 aa6.99□□□□□ -1.29
PTPDC1-201ENST00000288976 POLR3KQ9Y2Y1 108 aaPredicted RBP6.99□□□□□ -1.29
PTPDC1-201ENST00000288976 TCAPO15273 167 aa6.99□□□□□ -1.29
PTPDC1-201ENST00000288976 SLC25A6P12236 298 aa6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms