RNA–Protein interactions for RNA: ENST00000274071.6

PDGFC-201, Transcript of platelet derived growth factor C, humanhuman

TSL 1 (best)

Gene PDGFC, Length 2,987 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-201ENST00000274071 CNIH1O95406 144 aa7.79□□□□□ -1.16
PDGFC-201ENST00000274071 HLA-DRB1P01911 266 aa7.79□□□□□ -1.16
PDGFC-201ENST00000274071 CELA3AP09093 270 aa7.79□□□□□ -1.16
PDGFC-201ENST00000274071 ZNF823P16415 610 aa7.79□□□□□ -1.16
PDGFC-201ENST00000274071 ATP5G3P48201 142 aa7.79□□□□□ -1.16
PDGFC-201ENST00000274071 SEC11AP67812 179 aa7.79□□□□□ -1.16
PDGFC-201ENST00000274071 DLX2Q07687 328 aaPredicted RBP7.79□□□□□ -1.16
PDGFC-201ENST00000274071 PLCXD2Q0VAA5 305 aa7.79□□□□□ -1.16
PDGFC-201ENST00000274071 PSG7Q13046 419 aa7.79□□□□□ -1.16
PDGFC-201ENST00000274071 CRIP3Q6Q6R5 217 aa7.79□□□□□ -1.16
PDGFC-201ENST00000274071 Q6ZSR6 202 aa7.79□□□□□ -1.16
PDGFC-201ENST00000274071 ABHD17AQ96GS6 310 aa7.79□□□□□ -1.16
PDGFC-201ENST00000274071 MRPL16Q9NX20 251 aaKnown RBP7.79□□□□□ -1.16
PDGFC-201ENST00000274071 TNFRSF18Q9Y5U5 241 aa7.79□□□□□ -1.16
PDGFC-201ENST00000274071 FOXS1O43638 330 aa7.78□□□□□ -1.16
PDGFC-201ENST00000274071 PTGDSP41222 190 aa7.78□□□□□ -1.16
PDGFC-201ENST00000274071 GPR1P46091 355 aa7.78□□□□□ -1.16
PDGFC-201ENST00000274071 UQCRFS1P47985 274 aa7.78□□□□□ -1.16
PDGFC-201ENST00000274071 FABP6P51161 128 aa7.78□□□□□ -1.16
PDGFC-201ENST00000274071 RPL27P61353 136 aaKnown RBP7.78□□□□□ -1.16
PDGFC-201ENST00000274071 TMEM136Q6ZRR5 245 aa7.78□□□□□ -1.16
PDGFC-201ENST00000274071 TBC1D26Q86UD7 250 aa7.78□□□□□ -1.16
PDGFC-201ENST00000274071 MMD2Q8IY49 270 aa7.78□□□□□ -1.16
PDGFC-201ENST00000274071 GATSQ8NAP1 163 aa7.78□□□□□ -1.16
PDGFC-201ENST00000274071 VSTM2AQ8TAG5 236 aa7.78□□□□□ -1.16
PDGFC-201ENST00000274071 BAHD1Q8TBE0 780 aaPredicted RBP7.78□□□□□ -1.16
PDGFC-201ENST00000274071 SPSB4Q96A44 273 aa7.78□□□□□ -1.16
PDGFC-201ENST00000274071 TMEM45BQ96B21 275 aa7.78□□□□□ -1.16
PDGFC-201ENST00000274071 SCRT2Q9NQ03 307 aa7.78□□□□□ -1.16
PDGFC-201ENST00000274071 BOKQ9UMX3 212 aaPredicted RBP7.78□□□□□ -1.16
PDGFC-201ENST00000274071 SPCS1Q9Y6A9 102 aa7.78□□□□□ -1.16
PDGFC-201ENST00000274071 VCANP13611 3396 aa7.78□□□□□ -1.16
PDGFC-201ENST00000274071 M0R2Z0 102 aa7.78□□□□□ -1.16
PDGFC-201ENST00000274071 TNFRSF13BO14836 293 aaPredicted RBP7.78□□□□□ -1.16
PDGFC-201ENST00000274071 USF1P22415 310 aaPredicted RBP7.78□□□□□ -1.16
PDGFC-201ENST00000274071 PMP22Q01453 160 aa7.78□□□□□ -1.16
PDGFC-201ENST00000274071 DPTQ07507 201 aa7.78□□□□□ -1.16
PDGFC-201ENST00000274071 KISS1Q15726 138 aa7.78□□□□□ -1.16
PDGFC-201ENST00000274071 DEFB134Q4QY38 66 aa7.78□□□□□ -1.16
PDGFC-201ENST00000274071 TMEM164Q5U3C3 297 aa7.78□□□□□ -1.16
PDGFC-201ENST00000274071 FOXI2Q6ZQN5 318 aa7.78□□□□□ -1.16
PDGFC-201ENST00000274071 OR10G9Q8NGN4 311 aa7.78□□□□□ -1.16
PDGFC-201ENST00000274071 OR10G7Q8NGN6 311 aa7.78□□□□□ -1.16
PDGFC-201ENST00000274071 RNF133Q8WVZ7 376 aa7.78□□□□□ -1.16
PDGFC-201ENST00000274071 RNF183Q96D59 192 aa7.78□□□□□ -1.16
PDGFC-201ENST00000274071 PRUNE2Q8WUY3 3088 aa7.78□□□□□ -1.16
PDGFC-201ENST00000274071 TNRC6AQ8NDV7 1962 aaKnown RBP7.77□□□□□ -1.16
PDGFC-201ENST00000274071 ZNF816-ZNF321PA0A0X1KG74 233 aa7.77□□□□□ -1.16
PDGFC-201ENST00000274071 HSBP1O75506 76 aa7.77□□□□□ -1.16
PDGFC-201ENST00000274071 MT-ND6P03923 174 aa7.77□□□□□ -1.16
PDGFC-201ENST00000274071 DEFA4P12838 97 aa7.77□□□□□ -1.16
PDGFC-201ENST00000274071 EIF3IQ13347 325 aaKnown RBP7.77□□□□□ -1.16
PDGFC-201ENST00000274071 TMEFF1Q8IYR6 380 aa7.77□□□□□ -1.16
PDGFC-201ENST00000274071 C18orf32Q8TCD1 76 aa7.77□□□□□ -1.16
PDGFC-201ENST00000274071 SERTAD4Q9NUC0 356 aa7.77□□□□□ -1.16
PDGFC-201ENST00000274071 SNRNP200O75643 2136 aaKnown RBP7.77□□□□□ -1.17
PDGFC-201ENST00000274071 HTR1DP28221 377 aa7.77□□□□□ -1.17
PDGFC-201ENST00000274071 RUNX3Q13761 415 aa7.77□□□□□ -1.17
PDGFC-201ENST00000274071 TMEM97Q5BJF2 176 aa7.77□□□□□ -1.17
PDGFC-201ENST00000274071 DGAT2L6Q6ZPD8 337 aa7.77□□□□□ -1.17
PDGFC-201ENST00000274071 PRR22Q8IZ63 422 aa7.77□□□□□ -1.17
PDGFC-201ENST00000274071 TMEM52Q8NDY8 209 aa7.77□□□□□ -1.17
PDGFC-201ENST00000274071 RAB40CQ96S21 281 aa7.77□□□□□ -1.17
PDGFC-201ENST00000274071 TMEM70Q9BUB7 260 aa7.77□□□□□ -1.17
PDGFC-201ENST00000274071 OBP2AQ9NY56 170 aa7.77□□□□□ -1.17
PDGFC-201ENST00000274071 UBE2L5PA0A1B0GUS4 154 aa7.77□□□□□ -1.17
PDGFC-201ENST00000274071 ZNF716A6NP11 495 aa7.77□□□□□ -1.17
PDGFC-201ENST00000274071 RHBDL1O75783 438 aa7.77□□□□□ -1.17
PDGFC-201ENST00000274071 PEBP1P30086 187 aaKnown RBP7.77□□□□□ -1.17
PDGFC-201ENST00000274071 P2RY2P41231 377 aa7.77□□□□□ -1.17
PDGFC-201ENST00000274071 SLC35B1P78383 322 aa7.77□□□□□ -1.17
PDGFC-201ENST00000274071 TRIP6Q15654 476 aaKnown RBP7.77□□□□□ -1.17
PDGFC-201ENST00000274071 RPEL1Q2QD12 228 aa7.77□□□□□ -1.17
PDGFC-201ENST00000274071 C2orf91Q6ZV80 131 aa7.77□□□□□ -1.17
PDGFC-201ENST00000274071 BOD1L2Q8IYS8 172 aa7.77□□□□□ -1.17
PDGFC-201ENST00000274071 PLA2G2FQ9BZM2 168 aa7.77□□□□□ -1.17
PDGFC-201ENST00000274071 IL36GQ9NZH8 169 aa7.77□□□□□ -1.17
PDGFC-201ENST00000274071 A0A0G2JRQ6 117 aa7.76□□□□□ -1.17
PDGFC-201ENST00000274071 A0A1W2PPM0 123 aa7.76□□□□□ -1.17
PDGFC-201ENST00000274071 K7EN84 100 aa7.76□□□□□ -1.17
PDGFC-201ENST00000274071 DXOO77932 396 aaKnown RBP7.76□□□□□ -1.17
PDGFC-201ENST00000274071 RPS18P62269 152 aaKnown RBP7.76□□□□□ -1.17
PDGFC-201ENST00000274071 NNATQ16517 81 aa7.76□□□□□ -1.17
PDGFC-201ENST00000274071 TMEM52BQ4KMG9 183 aa7.76□□□□□ -1.17
PDGFC-201ENST00000274071 IGF2-ASQ6U949 168 aa7.76□□□□□ -1.17
PDGFC-201ENST00000274071 VN1R4Q7Z5H5 301 aa7.76□□□□□ -1.17
PDGFC-201ENST00000274071 YAF2Q8IY57 180 aa7.76□□□□□ -1.17
PDGFC-201ENST00000274071 HOXB13Q92826 284 aaPredicted RBP7.76□□□□□ -1.17
PDGFC-201ENST00000274071 FGF21Q9NSA1 209 aa7.76□□□□□ -1.17
PDGFC-201ENST00000274071 KIAA1549LQ6ZVL6 1849 aa7.76□□□□□ -1.17
PDGFC-201ENST00000274071 FBLL1A6NHQ2 334 aaKnown RBP7.76□□□□□ -1.17
PDGFC-201ENST00000274071 CRXO43186 299 aaPredicted RBP7.76□□□□□ -1.17
PDGFC-201ENST00000274071 SNAI2O43623 268 aa7.76□□□□□ -1.17
PDGFC-201ENST00000274071 HIST1H1EP10412 219 aaKnown RBP7.76□□□□□ -1.17
PDGFC-201ENST00000274071 IAPPP10997 89 aa7.76□□□□□ -1.17
PDGFC-201ENST00000274071 HERV-K104P61576 105 aa7.76□□□□□ -1.17
PDGFC-201ENST00000274071 HBG1P69891 147 aa7.76□□□□□ -1.17
PDGFC-201ENST00000274071 HBG2P69892 147 aa7.76□□□□□ -1.17
PDGFC-201ENST00000274071 SSBP2P81877 361 aaPredicted RBP7.76□□□□□ -1.17
PDGFC-201ENST00000274071 ATP5G2Q06055 141 aa7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 88.9 ms