RNA–Protein interactions for RNA: ENST00000273342.8

COL8A1-202, Transcript of collagen type VIII alpha 1 chain, humanhuman

APPRIS P1 TSL 2 BASIC

Gene COL8A1, Length 3,029 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-202ENST00000273342 U3KQA8 63 aa10.84□□□□□ -0.67
COL8A1-202ENST00000273342 TRAV34A0A0B4J273 112 aa10.84□□□□□ -0.67
COL8A1-202ENST00000273342 F6UZH7 168 aa10.84□□□□□ -0.67
COL8A1-202ENST00000273342 DLEU1O43261 78 aa10.84□□□□□ -0.67
COL8A1-202ENST00000273342 GNG3P63215 75 aa10.84□□□□□ -0.67
COL8A1-202ENST00000273342 HLA-DRB5Q30154 266 aa10.84□□□□□ -0.67
COL8A1-202ENST00000273342 ALKBH6Q3KRA9 238 aa10.84□□□□□ -0.67
COL8A1-202ENST00000273342 ZNF573Q86YE8 665 aa10.84□□□□□ -0.67
COL8A1-202ENST00000273342 VKORC1L1Q8N0U8 176 aa10.84□□□□□ -0.67
COL8A1-202ENST00000273342 SSMEM1Q8WWF3 244 aa10.84□□□□□ -0.67
COL8A1-202ENST00000273342 SFRP2Q96HF1 295 aa10.84□□□□□ -0.67
COL8A1-202ENST00000273342 TMEM210A6NLX4 147 aa10.84□□□□□ -0.67
COL8A1-202ENST00000273342 LRRC30A6NM36 301 aa10.84□□□□□ -0.67
COL8A1-202ENST00000273342 MARCH11A6NNE9 402 aa10.84□□□□□ -0.67
COL8A1-202ENST00000273342 TOX3O15405 576 aaPredicted RBP10.84□□□□□ -0.67
COL8A1-202ENST00000273342 CD82P27701 267 aa10.84□□□□□ -0.67
COL8A1-202ENST00000273342 AESQ08117 197 aa10.84□□□□□ -0.67
COL8A1-202ENST00000273342 Q0VFX4 171 aa10.84□□□□□ -0.67
COL8A1-202ENST00000273342 RIPPLY2Q5TAB7 128 aa10.84□□□□□ -0.67
COL8A1-202ENST00000273342 MAFAQ8NHW3 353 aaPredicted RBP10.84□□□□□ -0.67
COL8A1-202ENST00000273342 C5orf30Q96GV9 206 aa10.84□□□□□ -0.67
COL8A1-202ENST00000273342 TMEM106BQ9NUM4 274 aa10.84□□□□□ -0.67
COL8A1-202ENST00000273342 LRP5LA4QPB2 252 aa10.83□□□□□ -0.68
COL8A1-202ENST00000273342 SYNGR4O95473 234 aa10.83□□□□□ -0.68
COL8A1-202ENST00000273342 MT-CO3P00414 261 aa10.83□□□□□ -0.68
COL8A1-202ENST00000273342 IER3P46695 156 aa10.83□□□□□ -0.68
COL8A1-202ENST00000273342 SOX8P57073 446 aa10.83□□□□□ -0.68
COL8A1-202ENST00000273342 ZNF826PQ6ZT77 177 aa10.83□□□□□ -0.68
COL8A1-202ENST00000273342 OCC1Q8TAD7 63 aa10.83□□□□□ -0.68
COL8A1-202ENST00000273342 ELOVL5Q9NYP7 299 aa10.83□□□□□ -0.68
COL8A1-202ENST00000273342 TP53TG3Q9ULZ0 132 aa10.83□□□□□ -0.68
COL8A1-202ENST00000273342 RNF114Q9Y508 228 aa10.83□□□□□ -0.68
COL8A1-202ENST00000273342 ADAMTS20P59510 1910 aa10.83□□□□□ -0.68
COL8A1-202ENST00000273342 ROS1P08922 2347 aa10.83□□□□□ -0.68
COL8A1-202ENST00000273342 WNT9BO14905 357 aa10.83□□□□□ -0.68
COL8A1-202ENST00000273342 WNT2P09544 360 aa10.83□□□□□ -0.68
COL8A1-202ENST00000273342 ARL14EPLP0DKL9 152 aa10.83□□□□□ -0.68
COL8A1-202ENST00000273342 PLP2Q04941 152 aa10.83□□□□□ -0.68
COL8A1-202ENST00000273342 SRSF7Q16629 238 aaKnown RBP eCLIP10.83□□□□□ -0.68
COL8A1-202ENST00000273342 LYSMD4Q5XG99 296 aa10.83□□□□□ -0.68
COL8A1-202ENST00000273342 H2BFWTQ7Z2G1 175 aa10.83□□□□□ -0.68
COL8A1-202ENST00000273342 MRGPRDQ8TDS7 321 aa10.83□□□□□ -0.68
COL8A1-202ENST00000273342 KCNE4Q8WWG9 221 aa10.83□□□□□ -0.68
COL8A1-202ENST00000273342 SH2D2AQ9NP31 389 aa10.83□□□□□ -0.68
COL8A1-202ENST00000273342 CTNNBIP1Q9NSA3 81 aaPredicted RBP10.83□□□□□ -0.68
COL8A1-202ENST00000273342 LOC102723996A0A087X1L8 192 aa10.82□□□□□ -0.68
COL8A1-202ENST00000273342 KIR2DL5BA0A0G2JN68 375 aa10.82□□□□□ -0.68
COL8A1-202ENST00000273342 KIR2DL5BA0A0G2JPC4 375 aa10.82□□□□□ -0.68
COL8A1-202ENST00000273342 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP10.82□□□□□ -0.68
COL8A1-202ENST00000273342 CRISP2P16562 243 aa10.82□□□□□ -0.68
COL8A1-202ENST00000273342 PRR31Q5SQ13 230 aa10.82□□□□□ -0.68
COL8A1-202ENST00000273342 Q6P435 159 aa10.82□□□□□ -0.68
COL8A1-202ENST00000273342 WDR86Q86TI4 376 aa10.82□□□□□ -0.68
COL8A1-202ENST00000273342 SAXO1Q8IYX7 474 aa10.82□□□□□ -0.68
COL8A1-202ENST00000273342 KIR2DL5AQ8N109 375 aa10.82□□□□□ -0.68
COL8A1-202ENST00000273342 DCAF16Q9NXF7 216 aa10.82□□□□□ -0.68
COL8A1-202ENST00000273342 HSPB7Q9UBY9 170 aa10.82□□□□□ -0.68
COL8A1-202ENST00000273342 FCN1O00602 326 aa10.82□□□□□ -0.68
COL8A1-202ENST00000273342 AQP7O14520 342 aa10.82□□□□□ -0.68
COL8A1-202ENST00000273342 PSPNO60542 156 aa10.82□□□□□ -0.68
COL8A1-202ENST00000273342 TYMSP04818 313 aa10.82□□□□□ -0.68
COL8A1-202ENST00000273342 EPHA8P29322 1005 aaPredicted RBP10.82□□□□□ -0.68
COL8A1-202ENST00000273342 FOLR3P41439 243 aa10.82□□□□□ -0.68
COL8A1-202ENST00000273342 MSMO1Q15800 293 aa10.82□□□□□ -0.68
COL8A1-202ENST00000273342 MIC13Q5XKP0 118 aa10.82□□□□□ -0.68
COL8A1-202ENST00000273342 Q6ZVH6 145 aa10.82□□□□□ -0.68
COL8A1-202ENST00000273342 VAMP8Q9BV40 100 aa10.82□□□□□ -0.68
COL8A1-202ENST00000273342 PMS2P5A8MQ11 134 aa10.82□□□□□ -0.68
COL8A1-202ENST00000273342 TCF21O43680 179 aa10.82□□□□□ -0.68
COL8A1-202ENST00000273342 RAC2P15153 192 aa10.82□□□□□ -0.68
COL8A1-202ENST00000273342 TCL1AP56279 114 aa10.82□□□□□ -0.68
COL8A1-202ENST00000273342 BRWD1-AS2P59051 145 aa10.82□□□□□ -0.68
COL8A1-202ENST00000273342 DCAF10Q5QP82 559 aa10.82□□□□□ -0.68
COL8A1-202ENST00000273342 SCCPDHQ8NBX0 429 aa10.82□□□□□ -0.68
COL8A1-202ENST00000273342 BTF3L4Q96K17 158 aa10.82□□□□□ -0.68
COL8A1-202ENST00000273342 POM121L2Q96KW2 1035 aa10.82□□□□□ -0.68
COL8A1-202ENST00000273342 QTRT1Q9BXR0 403 aaKnown RBP10.82□□□□□ -0.68
COL8A1-202ENST00000273342 MRPL18Q9H0U6 180 aaKnown RBP10.82□□□□□ -0.68
COL8A1-202ENST00000273342 LPAR2Q9HBW0 351 aa10.82□□□□□ -0.68
COL8A1-202ENST00000273342 KIAA1549Q9HCM3 1950 aa10.81□□□□□ -0.68
COL8A1-202ENST00000273342 MLNRO43193 412 aa10.81□□□□□ -0.68
COL8A1-202ENST00000273342 GABRA2P47869 451 aa10.81□□□□□ -0.68
COL8A1-202ENST00000273342 PCP4P48539 62 aa10.81□□□□□ -0.68
COL8A1-202ENST00000273342 LINC00310P59036 64 aa10.81□□□□□ -0.68
COL8A1-202ENST00000273342 LCN2P80188 198 aa10.81□□□□□ -0.68
COL8A1-202ENST00000273342 MMDQ15546 238 aa10.81□□□□□ -0.68
COL8A1-202ENST00000273342 KRTCAP3Q53RY4 240 aa10.81□□□□□ -0.68
COL8A1-202ENST00000273342 ATOH7Q8N100 152 aa10.81□□□□□ -0.68
COL8A1-202ENST00000273342 OR2Y1Q8NGV0 311 aa10.81□□□□□ -0.68
COL8A1-202ENST00000273342 DCTN5Q9BTE1 182 aa10.81□□□□□ -0.68
COL8A1-202ENST00000273342 SIT1Q9Y3P8 196 aa10.81□□□□□ -0.68
COL8A1-202ENST00000273342 TIMM9Q9Y5J7 89 aa10.81□□□□□ -0.68
COL8A1-202ENST00000273342 RRHO14718 337 aa10.81□□□□□ -0.68
COL8A1-202ENST00000273342 VENTXO95231 258 aa10.81□□□□□ -0.68
COL8A1-202ENST00000273342 IGHEP01854 428 aa10.81□□□□□ -0.68
COL8A1-202ENST00000273342 TRA2AQ13595 282 aaKnown RBP eCLIP10.81□□□□□ -0.68
COL8A1-202ENST00000273342 ZNF497Q6ZNH5 498 aa10.81□□□□□ -0.68
COL8A1-202ENST00000273342 TUBG2Q9NRH3 451 aa10.81□□□□□ -0.68
COL8A1-202ENST00000273342 LINC00473A8K010 186 aa10.8□□□□□ -0.68
COL8A1-202ENST00000273342 SH2D1BO14796 132 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms