RNA–Protein interactions for RNA: ENST00000263966.7

USP13-201, Transcript of ubiquitin specific peptidase 13, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP13, Length 8,323 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP13-201ENST00000263966 CISD3P0C7P0 127 aa14.3□□□□□ -0.12
USP13-201ENST00000263966 SPNS2Q8IVW8 549 aa14.3□□□□□ -0.12
USP13-201ENST00000263966 ABHD1Q96SE0 405 aa14.3□□□□□ -0.12
USP13-201ENST00000263966 TGFAP01135 160 aa14.3□□□□□ -0.12
USP13-201ENST00000263966 TMEM50BP56557 158 aa14.3□□□□□ -0.12
USP13-201ENST00000263966 ITLN1Q8WWA0 313 aa14.3□□□□□ -0.12
USP13-201ENST00000263966 PXMP4Q9Y6I8 212 aa14.3□□□□□ -0.12
USP13-201ENST00000263966 IL4P05112 153 aa14.29□□□□□ -0.12
USP13-201ENST00000263966 CRHP06850 196 aa14.29□□□□□ -0.12
USP13-201ENST00000263966 RGP1Q92546 391 aaPredicted RBP14.29□□□□□ -0.12
USP13-201ENST00000263966 TMEM186Q96B77 213 aa14.29□□□□□ -0.12
USP13-201ENST00000263966 G6PC2Q9NQR9 355 aa14.29□□□□□ -0.12
USP13-201ENST00000263966 A0A0U1RQV5 110 aa14.29□□□□□ -0.12
USP13-201ENST00000263966 K7ERU9 68 aa14.29□□□□□ -0.12
USP13-201ENST00000263966 CEACAM1P13688 526 aa14.29□□□□□ -0.12
USP13-201ENST00000263966 C19orf24Q9BVV8 132 aa14.29□□□□□ -0.12
USP13-201ENST00000263966 RIF1Q5UIP0 2472 aaKnown RBP14.29□□□□□ -0.12
USP13-201ENST00000263966 IBA57Q5T440 356 aaKnown RBP14.29□□□□□ -0.12
USP13-201ENST00000263966 OVCH2Q7RTZ1 564 aa14.29□□□□□ -0.12
USP13-201ENST00000263966 PATE3B3GLJ2 98 aa14.29□□□□□ -0.12
USP13-201ENST00000263966 HYAL3O43820 417 aaPredicted RBP14.29□□□□□ -0.12
USP13-201ENST00000263966 PTPRDP23468 1912 aa14.29□□□□□ -0.12
USP13-201ENST00000263966 NRXN3Q9Y4C0 1643 aa14.29□□□□□ -0.12
USP13-201ENST00000263966 FBLL1A6NHQ2 334 aaKnown RBP14.29□□□□□ -0.12
USP13-201ENST00000263966 OR9G4Q8NGQ1 327 aa14.29□□□□□ -0.12
USP13-201ENST00000263966 VN1R17PQ8TDU5 208 aa14.29□□□□□ -0.12
USP13-201ENST00000263966 IGHV3-72A0A0B4J1Y9 119 aa14.29□□□□□ -0.12
USP13-201ENST00000263966 C5orf67F2Z3F1 127 aa14.29□□□□□ -0.12
USP13-201ENST00000263966 SERF2P84101 59 aa14.29□□□□□ -0.12
USP13-201ENST00000263966 OR9G1Q8NH87 305 aa14.29□□□□□ -0.12
USP13-201ENST00000263966 MBNL2Q5VZF2 373 aaKnown RBP14.28□□□□□ -0.12
USP13-201ENST00000263966 FRMPD3Q5JV73 1810 aa14.28□□□□□ -0.12
USP13-201ENST00000263966 TRAV8-7A0A075B6U6 113 aa14.28□□□□□ -0.12
USP13-201ENST00000263966 COL9A1P20849 921 aa14.28□□□□□ -0.12
USP13-201ENST00000263966 C12orf54Q6X4T0 127 aa14.28□□□□□ -0.12
USP13-201ENST00000263966 IGHV1-45A0A0A0MS14 117 aa14.28□□□□□ -0.12
USP13-201ENST00000263966 TRAV39A0A0B4J263 110 aa14.28□□□□□ -0.12
USP13-201ENST00000263966 TMEM42Q69YG0 159 aa14.28□□□□□ -0.12
USP13-201ENST00000263966 UCN2Q96RP3 112 aa14.28□□□□□ -0.12
USP13-201ENST00000263966 DOCK4Q8N1I0 1966 aa14.28□□□□□ -0.12
USP13-201ENST00000263966 DNAJC4Q9NNZ3 241 aa14.28□□□□□ -0.12
USP13-201ENST00000263966 CCL28Q9NRJ3 127 aa14.28□□□□□ -0.12
USP13-201ENST00000263966 CALYQ9NYX4 217 aa14.28□□□□□ -0.12
USP13-201ENST00000263966 SEMA5BQ9P283 1151 aa14.28□□□□□ -0.12
USP13-201ENST00000263966 PAGE4O60829 102 aa14.28□□□□□ -0.12
USP13-201ENST00000263966 FXYD3Q14802 87 aa14.28□□□□□ -0.12
USP13-201ENST00000263966 LDLRAD2Q5SZI1 272 aa14.28□□□□□ -0.12
USP13-201ENST00000263966 OR51G1Q8NGK1 321 aa14.28□□□□□ -0.12
USP13-201ENST00000263966 TXNDC17Q9BRA2 123 aa14.28□□□□□ -0.12
USP13-201ENST00000263966 DSPPQ9NZW4 1301 aa14.28□□□□□ -0.12
USP13-201ENST00000263966 STRCP1A6NGW2 1772 aa14.28□□□□□ -0.12
USP13-201ENST00000263966 OR4C45A6NMZ5 311 aa14.28□□□□□ -0.12
USP13-201ENST00000263966 C9JCJ5 164 aa14.28□□□□□ -0.12
USP13-201ENST00000263966 DRD3P35462 400 aa14.28□□□□□ -0.12
USP13-201ENST00000263966 MT-ND6P03923 174 aa14.28□□□□□ -0.12
USP13-201ENST00000263966 TMEM74BQ9NUR3 256 aa14.28□□□□□ -0.12
USP13-201ENST00000263966 TOMM7Q9P0U1 55 aa14.28□□□□□ -0.12
USP13-201ENST00000263966 ALX3O95076 343 aa14.27□□□□□ -0.12
USP13-201ENST00000263966 TMEM136Q6ZRR5 245 aa14.27□□□□□ -0.12
USP13-201ENST00000263966 OR1K1Q8NGR3 316 aa14.27□□□□□ -0.12
USP13-201ENST00000263966 C8orf46Q8TAG6 207 aa14.27□□□□□ -0.12
USP13-201ENST00000263966 PTGDSP41222 190 aa14.27□□□□□ -0.12
USP13-201ENST00000263966 MARVELD3Q96A59 401 aa14.27□□□□□ -0.12
USP13-201ENST00000263966 TUBD1Q9UJT1 453 aa14.27□□□□□ -0.12
USP13-201ENST00000263966 IGLV3-16A0A075B6K0 115 aa14.27□□□□□ -0.12
USP13-201ENST00000263966 CGB2Q6NT52 195 aa14.27□□□□□ -0.12
USP13-201ENST00000263966 NKX2-8O15522 239 aa14.27□□□□□ -0.13
USP13-201ENST00000263966 RBM11P57052 281 aaKnown RBP14.27□□□□□ -0.13
USP13-201ENST00000263966 FAM24BQ8N5W8 94 aa14.27□□□□□ -0.13
USP13-201ENST00000263966 FAM57AQ8TBR7 257 aa14.27□□□□□ -0.13
USP13-201ENST00000263966 C7orf69Q9H7B7 122 aa14.27□□□□□ -0.13
USP13-201ENST00000263966 KIAA1551Q9HCM1 1747 aa14.27□□□□□ -0.13
USP13-201ENST00000263966 SP9P0CG40 484 aa14.27□□□□□ -0.13
USP13-201ENST00000263966 TMEM177Q53S58 311 aa14.27□□□□□ -0.13
USP13-201ENST00000263966 SAPCD1Q5SSQ6 148 aa14.27□□□□□ -0.13
USP13-201ENST00000263966 C1QL3Q5VWW1 255 aa14.27□□□□□ -0.13
USP13-201ENST00000263966 LINC01555Q8NAE3 123 aa14.27□□□□□ -0.13
USP13-201ENST00000263966 PRSS22Q9GZN4 317 aa14.27□□□□□ -0.13
USP13-201ENST00000263966 ZNF385DQ9H6B1 395 aa14.27□□□□□ -0.13
USP13-201ENST00000263966 A0A1W2PPE3 182 aa14.27□□□□□ -0.13
USP13-201ENST00000263966 HMSDA8MTL9 139 aa14.27□□□□□ -0.13
USP13-201ENST00000263966 SEC11BP0C7V7 166 aa14.27□□□□□ -0.13
USP13-201ENST00000263966 SSTR5P35346 364 aa14.27□□□□□ -0.13
USP13-201ENST00000263966 FAM3BP58499 235 aaPredicted RBP14.27□□□□□ -0.13
USP13-201ENST00000263966 PQLC2Q6ZP29 291 aa14.27□□□□□ -0.13
USP13-201ENST00000263966 LRTM2Q8N967 370 aa14.27□□□□□ -0.13
USP13-201ENST00000263966 AANATQ16613 207 aa14.26□□□□□ -0.13
USP13-201ENST00000263966 CLEC18BQ6UXF7 455 aa14.26□□□□□ -0.13
USP13-201ENST00000263966 LINC01465Q8N7H1 131 aa14.26□□□□□ -0.13
USP13-201ENST00000263966 AKIRIN1Q9H9L7 192 aaPredicted RBP14.26□□□□□ -0.13
USP13-201ENST00000263966 ZNF385CQ66K41 422 aaPredicted RBP14.26□□□□□ -0.13
USP13-201ENST00000263966 MTURNQ8N3F0 131 aa14.26□□□□□ -0.13
USP13-201ENST00000263966 TNRC6CQ9HCJ0 1690 aaKnown RBP14.26□□□□□ -0.13
USP13-201ENST00000263966 MMP9P14780 707 aa14.26□□□□□ -0.13
USP13-201ENST00000263966 HOXD3P31249 432 aaPredicted RBP14.26□□□□□ -0.13
USP13-201ENST00000263966 FGF12P61328 243 aa14.26□□□□□ -0.13
USP13-201ENST00000263966 FAM216AQ8WUB2 273 aa14.26□□□□□ -0.13
USP13-201ENST00000263966 HSF4Q9ULV5 492 aa14.26□□□□□ -0.13
USP13-201ENST00000263966 ST6GALNAC2Q9UJ37 374 aa14.26□□□□□ -0.13
USP13-201ENST00000263966 NBASA2RRP1 2371 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms