RNA–Protein interactions for RNA: ENST00000259605.10

RNF38-201, Transcript of ring finger protein 38, humanhuman

TSL 1 (best) BASIC

Gene RNF38, Length 5,012 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38-201ENST00000259605 LINC01619G3V211 115 aa3.44□□□□□ -1.86
RNF38-201ENST00000259605 PHOX2AO14813 284 aa3.44□□□□□ -1.86
RNF38-201ENST00000259605 EIF3GO75821 320 aaKnown RBP eCLIP3.44□□□□□ -1.86
RNF38-201ENST00000259605 NUDT3O95989 172 aa3.44□□□□□ -1.86
RNF38-201ENST00000259605 IGHMP01871 453 aa3.44□□□□□ -1.86
RNF38-201ENST00000259605 APELAP0DMC3 54 aa3.44□□□□□ -1.86
RNF38-201ENST00000259605 RPL35AP18077 110 aaKnown RBP3.44□□□□□ -1.86
RNF38-201ENST00000259605 SSTR5P35346 364 aa3.44□□□□□ -1.86
RNF38-201ENST00000259605 PSG5Q15238 335 aa3.44□□□□□ -1.86
RNF38-201ENST00000259605 BATFQ16520 125 aa3.44□□□□□ -1.86
RNF38-201ENST00000259605 GUK1Q16774 197 aa3.44□□□□□ -1.86
RNF38-201ENST00000259605 LAX1Q8IWV1 398 aa3.44□□□□□ -1.86
RNF38-201ENST00000259605 DMRTC2Q8IXT2 367 aaPredicted RBP3.44□□□□□ -1.86
RNF38-201ENST00000259605 SVBPQ8N300 66 aa3.44□□□□□ -1.86
RNF38-201ENST00000259605 CELF2-AS1Q8N7Q2 184 aa3.44□□□□□ -1.86
RNF38-201ENST00000259605 ISOC2Q96AB3 205 aa3.44□□□□□ -1.86
RNF38-201ENST00000259605 SCARF2Q96GP6 870 aaPredicted RBP3.44□□□□□ -1.86
RNF38-201ENST00000259605 LURAP1Q96LR2 239 aa3.44□□□□□ -1.86
RNF38-201ENST00000259605 ZNF385AQ96PM9 386 aaKnown RBP3.44□□□□□ -1.86
RNF38-201ENST00000259605 RNF5Q99942 180 aa3.44□□□□□ -1.86
RNF38-201ENST00000259605 FAAP24Q9BTP7 215 aa3.44□□□□□ -1.86
RNF38-201ENST00000259605 PARP12Q9H0J9 701 aaKnown RBP3.44□□□□□ -1.86
RNF38-201ENST00000259605 MANBALQ9NQG1 85 aa3.44□□□□□ -1.86
RNF38-201ENST00000259605 GAB2Q9UQC2 676 aa3.44□□□□□ -1.86
RNF38-201ENST00000259605 CNOT1A5YKK6 2376 aaKnown RBP3.44□□□□□ -1.86
RNF38-201ENST00000259605 MYH9P35579 1960 aaKnown RBP3.43□□□□□ -1.86
RNF38-201ENST00000259605 GVINP1Q7Z2Y8 2422 aa3.43□□□□□ -1.86
RNF38-201ENST00000259605 ATRXP46100 2492 aa3.43□□□□□ -1.86
RNF38-201ENST00000259605 RBFOX2O43251 390 aaKnown RBP eCLIP3.43□□□□□ -1.86
RNF38-201ENST00000259605 RNASE1P07998 156 aaKnown RBP3.43□□□□□ -1.86
RNF38-201ENST00000259605 HOXD3P31249 432 aaPredicted RBP3.43□□□□□ -1.86
RNF38-201ENST00000259605 GPR183P32249 361 aa3.43□□□□□ -1.86
RNF38-201ENST00000259605 HSPE1P61604 102 aaKnown RBP3.43□□□□□ -1.86
RNF38-201ENST00000259605 KIAA0141Q14154 515 aaPredicted RBP3.43□□□□□ -1.86
RNF38-201ENST00000259605 MST1LQ2TV78 715 aa3.43□□□□□ -1.86
RNF38-201ENST00000259605 TMEM95Q3KNT9 176 aa3.43□□□□□ -1.86
RNF38-201ENST00000259605 SLC35E4Q6ICL7 350 aa3.43□□□□□ -1.86
RNF38-201ENST00000259605 HCP5Q6MZN7 132 aa3.43□□□□□ -1.86
RNF38-201ENST00000259605 CLEC19AQ6UXS0 136 aa3.43□□□□□ -1.86
RNF38-201ENST00000259605 Q6ZWC4 215 aa3.43□□□□□ -1.86
RNF38-201ENST00000259605 TMEM229BQ8NBD8 167 aa3.43□□□□□ -1.86
RNF38-201ENST00000259605 OR51G1Q8NGK1 321 aa3.43□□□□□ -1.86
RNF38-201ENST00000259605 HSPB7Q9UBY9 170 aa3.43□□□□□ -1.86
RNF38-201ENST00000259605 NEU3Q9UQ49 428 aa3.43□□□□□ -1.86
RNF38-201ENST00000259605 SMAD5-AS1Q9Y6J3 95 aa3.43□□□□□ -1.86
RNF38-201ENST00000259605 WDR90Q96KV7 1748 aa3.43□□□□□ -1.86
RNF38-201ENST00000259605 MED19A0JLT2 244 aaPredicted RBP3.43□□□□□ -1.86
RNF38-201ENST00000259605 IFITM5A6NNB3 132 aa3.43□□□□□ -1.86
RNF38-201ENST00000259605 A8MWL6 223 aa3.43□□□□□ -1.86
RNF38-201ENST00000259605 PYCARD-AS1I3L0S3 204 aa3.43□□□□□ -1.86
RNF38-201ENST00000259605 CELA2AP08217 269 aa3.43□□□□□ -1.86
RNF38-201ENST00000259605 PSMB6P28072 239 aa3.43□□□□□ -1.86
RNF38-201ENST00000259605 HRH1P35367 487 aa3.43□□□□□ -1.86
RNF38-201ENST00000259605 RND2P52198 227 aa3.43□□□□□ -1.86
RNF38-201ENST00000259605 CKS1BP61024 79 aa3.43□□□□□ -1.86
RNF38-201ENST00000259605 ZNF818PQ6ZRF7 136 aa3.43□□□□□ -1.86
RNF38-201ENST00000259605 LINC00518Q8N0U6 118 aa3.43□□□□□ -1.86
RNF38-201ENST00000259605 RAB37Q96AX2 223 aa3.43□□□□□ -1.86
RNF38-201ENST00000259605 SMIM12Q96EX1 92 aa3.43□□□□□ -1.86
RNF38-201ENST00000259605 LRRC3BQ96PB8 259 aa3.43□□□□□ -1.86
RNF38-201ENST00000259605 TMEM133Q9H2Q1 129 aa3.43□□□□□ -1.86
RNF38-201ENST00000259605 ZDHHC11Q9H8X9 412 aa3.43□□□□□ -1.86
RNF38-201ENST00000259605 RGPD4Q7Z3J3 1758 aa3.43□□□□□ -1.86
RNF38-201ENST00000259605 FAM186AA6NE01 2351 aa3.43□□□□□ -1.86
RNF38-201ENST00000259605 CABIN1Q9Y6J0 2220 aa3.43□□□□□ -1.86
RNF38-201ENST00000259605 ANKRD36CQ5JPF3 1778 aa3.43□□□□□ -1.86
RNF38-201ENST00000259605 TGIF2-C20orf24A0A0A6YYL0 155 aa3.43□□□□□ -1.86
RNF38-201ENST00000259605 ANKRD20A5PA0PJZ0 165 aa3.43□□□□□ -1.86
RNF38-201ENST00000259605 PPP6CO00743 305 aa3.43□□□□□ -1.86
RNF38-201ENST00000259605 KLK8O60259 260 aa3.43□□□□□ -1.86
RNF38-201ENST00000259605 RAMP3O60896 148 aa3.43□□□□□ -1.86
RNF38-201ENST00000259605 CTSDP07339 412 aaPredicted RBP3.43□□□□□ -1.86
RNF38-201ENST00000259605 LGALS3P17931 250 aaKnown RBP3.43□□□□□ -1.86
RNF38-201ENST00000259605 OR10J1P30954 320 aa3.43□□□□□ -1.86
RNF38-201ENST00000259605 CCKARP32238 428 aa3.43□□□□□ -1.86
RNF38-201ENST00000259605 HLA-DRB5Q30154 266 aa3.43□□□□□ -1.86
RNF38-201ENST00000259605 MRM1Q6IN84 353 aaKnown RBP3.43□□□□□ -1.86
RNF38-201ENST00000259605 CBLN3Q6UW01 205 aa3.43□□□□□ -1.86
RNF38-201ENST00000259605 SH2D6Q7Z4S9 175 aa3.43□□□□□ -1.86
RNF38-201ENST00000259605 LRTM2Q8N967 370 aa3.43□□□□□ -1.86
RNF38-201ENST00000259605 OR10S1Q8NGN2 331 aa3.43□□□□□ -1.86
RNF38-201ENST00000259605 TSKUQ8WUA8 353 aa3.43□□□□□ -1.86
RNF38-201ENST00000259605 PGLYRP3Q96LB9 341 aa3.43□□□□□ -1.86
RNF38-201ENST00000259605 TMEM70Q9BUB7 260 aa3.43□□□□□ -1.86
RNF38-201ENST00000259605 SLIRPQ9GZT3 109 aaKnown RBP3.43□□□□□ -1.86
RNF38-201ENST00000259605 UBR2Q8IWV8 1755 aa3.43□□□□□ -1.86
RNF38-201ENST00000259605 LINC01549A6NIU2 74 aa3.43□□□□□ -1.86
RNF38-201ENST00000259605 NPIPB8E9PQR5 432 aa3.43□□□□□ -1.86
RNF38-201ENST00000259605 NPIPB9F8W1W9 429 aa3.43□□□□□ -1.86
RNF38-201ENST00000259605 ZNF561-AS1K7EIQ3 104 aa3.43□□□□□ -1.86
RNF38-201ENST00000259605 TSPAN2O60636 221 aa3.43□□□□□ -1.86
RNF38-201ENST00000259605 NPIPB7O75200 414 aa3.43□□□□□ -1.86
RNF38-201ENST00000259605 IL4P05112 153 aa3.43□□□□□ -1.86
RNF38-201ENST00000259605 ALPLP05186 524 aa3.43□□□□□ -1.86
RNF38-201ENST00000259605 CCL3L1P16619 93 aa3.43□□□□□ -1.86
RNF38-201ENST00000259605 PAX8Q06710 450 aa3.43□□□□□ -1.86
RNF38-201ENST00000259605 IGFL3Q6UXB1 125 aa3.43□□□□□ -1.86
RNF38-201ENST00000259605 CIARTQ8N365 385 aaPredicted RBP3.43□□□□□ -1.86
RNF38-201ENST00000259605 OR4C5Q8NGB2 326 aa3.43□□□□□ -1.86
RNF38-201ENST00000259605 OR10G4Q8NGN3 311 aa3.43□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms