RNA–Protein interactions for RNA: ENST00000258772.9

DDX56-201, Transcript of DEAD-box helicase 56, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX56, Length 2,336 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-201ENST00000258772 SRD5A3Q9H8P0 318 aa12.71□□□□□ -0.38
DDX56-201ENST00000258772 ZNF729A6NN14 1252 aaPredicted RBP12.7□□□□□ -0.38
DDX56-201ENST00000258772 NDUFS6O75380 124 aaKnown RBP12.7□□□□□ -0.38
DDX56-201ENST00000258772 FOXF2Q12947 444 aa12.7□□□□□ -0.38
DDX56-201ENST00000258772 OR51G1Q8NGK1 321 aa12.7□□□□□ -0.38
DDX56-201ENST00000258772 OR4X1Q8NH49 305 aa12.7□□□□□ -0.38
DDX56-201ENST00000258772 DCTN5Q9BTE1 182 aa12.7□□□□□ -0.38
DDX56-201ENST00000258772 WASF3Q9UPY6 502 aa12.7□□□□□ -0.38
DDX56-201ENST00000258772 PRRC2CQ9Y520 2896 aaKnown RBP12.7□□□□□ -0.38
DDX56-201ENST00000258772 A6NJY4 79 aa12.7□□□□□ -0.38
DDX56-201ENST00000258772 C15orf65H3BRN8 121 aa12.7□□□□□ -0.38
DDX56-201ENST00000258772 SPINT2O43291 252 aa12.7□□□□□ -0.38
DDX56-201ENST00000258772 CECR9P0C854 216 aa12.7□□□□□ -0.38
DDX56-201ENST00000258772 FABP4P15090 132 aa12.7□□□□□ -0.38
DDX56-201ENST00000258772 TUBG1P23258 451 aa12.7□□□□□ -0.38
DDX56-201ENST00000258772 TUBG2Q9NRH3 451 aa12.7□□□□□ -0.38
DDX56-201ENST00000258772 INTS1Q8N201 2190 aaKnown RBP12.69□□□□□ -0.38
DDX56-201ENST00000258772 C17orf112F2Z3M2 114 aa12.69□□□□□ -0.38
DDX56-201ENST00000258772 PAGE4O60829 102 aa12.69□□□□□ -0.38
DDX56-201ENST00000258772 ADH4P08319 380 aa12.69□□□□□ -0.38
DDX56-201ENST00000258772 HTD2P86397 168 aa12.69□□□□□ -0.38
DDX56-201ENST00000258772 ZNF718Q3SXZ3 478 aa12.69□□□□□ -0.38
DDX56-201ENST00000258772 CD177Q8N6Q3 437 aa12.69□□□□□ -0.38
DDX56-201ENST00000258772 C9orf106Q8NAJ2 232 aa12.69□□□□□ -0.38
DDX56-201ENST00000258772 NECAP1Q8NC96 275 aa12.69□□□□□ -0.38
DDX56-201ENST00000258772 C1orf162Q8NEQ5 155 aaPredicted RBP12.69□□□□□ -0.38
DDX56-201ENST00000258772 SNX22Q96L94 193 aa12.69□□□□□ -0.38
DDX56-201ENST00000258772 QTRT1Q9BXR0 403 aaKnown RBP12.69□□□□□ -0.38
DDX56-201ENST00000258772 PITPNC1Q9UKF7 332 aa12.69□□□□□ -0.38
DDX56-201ENST00000258772 CACNA1GO43497 2377 aa12.69□□□□□ -0.38
DDX56-201ENST00000258772 C15orf62A8K5M9 175 aa12.68□□□□□ -0.38
DDX56-201ENST00000258772 H7BYZ3 331 aa12.68□□□□□ -0.38
DDX56-201ENST00000258772 PROP1O75360 226 aa12.68□□□□□ -0.38
DDX56-201ENST00000258772 OR9G9P0C7N8 305 aa12.68□□□□□ -0.38
DDX56-201ENST00000258772 DEFA4P12838 97 aa12.68□□□□□ -0.38
DDX56-201ENST00000258772 HIST1H1BP16401 226 aaKnown RBP12.68□□□□□ -0.38
DDX56-201ENST00000258772 GCH1P30793 250 aa12.68□□□□□ -0.38
DDX56-201ENST00000258772 R3HDM4Q96D70 268 aa12.68□□□□□ -0.38
DDX56-201ENST00000258772 M0R296 226 aa12.68□□□□□ -0.38
DDX56-201ENST00000258772 GZMHP20718 246 aa12.68□□□□□ -0.38
DDX56-201ENST00000258772 DUTP33316 252 aaKnown RBP12.68□□□□□ -0.38
DDX56-201ENST00000258772 GALR1P47211 349 aa12.68□□□□□ -0.38
DDX56-201ENST00000258772 CCL11P51671 97 aa12.68□□□□□ -0.38
DDX56-201ENST00000258772 PAX5Q02548 391 aa12.68□□□□□ -0.38
DDX56-201ENST00000258772 ACOT6Q3I5F7 207 aaPredicted RBP12.68□□□□□ -0.38
DDX56-201ENST00000258772 C9orf152Q5JTZ5 239 aa12.68□□□□□ -0.38
DDX56-201ENST00000258772 TRAT1Q6PIZ9 186 aa12.68□□□□□ -0.38
DDX56-201ENST00000258772 TGIF2LYQ8IUE0 185 aa12.68□□□□□ -0.38
DDX56-201ENST00000258772 Q8N7P7 452 aa12.68□□□□□ -0.38
DDX56-201ENST00000258772 LRRC29Q8WV35 223 aa12.68□□□□□ -0.38
DDX56-201ENST00000258772 PFDN5Q99471 154 aa12.68□□□□□ -0.38
DDX56-201ENST00000258772 PRDM13Q9H4Q3 707 aa12.68□□□□□ -0.38
DDX56-201ENST00000258772 PRDX2P32119 198 aa12.67□□□□□ -0.38
DDX56-201ENST00000258772 CDC34P49427 236 aaPredicted RBP12.67□□□□□ -0.38
DDX56-201ENST00000258772 EDDM3AQ14507 147 aa12.67□□□□□ -0.38
DDX56-201ENST00000258772 RTP5Q14D33 572 aa12.67□□□□□ -0.38
DDX56-201ENST00000258772 LTC4SQ16873 150 aa12.67□□□□□ -0.38
DDX56-201ENST00000258772 NEIL1Q96FI4 390 aaPredicted RBP12.67□□□□□ -0.38
DDX56-201ENST00000258772 OR5B12Q96R08 314 aa12.67□□□□□ -0.38
DDX56-201ENST00000258772 OR6C3Q9NZP0 311 aa12.67□□□□□ -0.38
DDX56-201ENST00000258772 GAB2Q9UQC2 676 aa12.67□□□□□ -0.38
DDX56-201ENST00000258772 NKX2-8O15522 239 aa12.67□□□□□ -0.38
DDX56-201ENST00000258772 CD1BP29016 333 aa12.67□□□□□ -0.38
DDX56-201ENST00000258772 GPR12P47775 334 aa12.67□□□□□ -0.38
DDX56-201ENST00000258772 MBNL2Q5VZF2 373 aaKnown RBP12.67□□□□□ -0.38
DDX56-201ENST00000258772 FDCSPQ8NFU4 85 aa12.67□□□□□ -0.38
DDX56-201ENST00000258772 ANAPC16Q96DE5 110 aa12.67□□□□□ -0.38
DDX56-201ENST00000258772 DIRC2Q96SL1 478 aa12.67□□□□□ -0.38
DDX56-201ENST00000258772 HIST1H2BLQ99880 126 aa12.67□□□□□ -0.38
DDX56-201ENST00000258772 WDR83OSQ9Y284 106 aa12.67□□□□□ -0.38
DDX56-201ENST00000258772 IGHV2OR16-5A0A0B4J2B6 119 aa12.66□□□□□ -0.38
DDX56-201ENST00000258772 IGLV1-44P01699 117 aa12.66□□□□□ -0.38
DDX56-201ENST00000258772 GYPAP02724 150 aa12.66□□□□□ -0.38
DDX56-201ENST00000258772 AARDQ4LEZ3 155 aa12.66□□□□□ -0.38
DDX56-201ENST00000258772 DNLZQ5SXM8 178 aa12.66□□□□□ -0.38
DDX56-201ENST00000258772 PLPPR2Q96GM1 343 aa12.66□□□□□ -0.38
DDX56-201ENST00000258772 PACRGQ96M98 296 aaPredicted RBP12.66□□□□□ -0.38
DDX56-201ENST00000258772 ELOVL1Q9BW60 279 aa12.66□□□□□ -0.38
DDX56-201ENST00000258772 A0A1B0GWJ7 208 aa12.66□□□□□ -0.38
DDX56-201ENST00000258772 SMCO3A2RU48 225 aa12.66□□□□□ -0.38
DDX56-201ENST00000258772 C11orf94C9JXX5 98 aa12.66□□□□□ -0.38
DDX56-201ENST00000258772 AQP7O14520 342 aa12.66□□□□□ -0.38
DDX56-201ENST00000258772 FCGR3BO75015 233 aa12.66□□□□□ -0.38
DDX56-201ENST00000258772 HPRT1P00492 218 aa12.66□□□□□ -0.38
DDX56-201ENST00000258772 NPPCP23582 126 aa12.66□□□□□ -0.38
DDX56-201ENST00000258772 TMEM95Q3KNT9 176 aa12.66□□□□□ -0.38
DDX56-201ENST00000258772 MORN2Q502X0 79 aa12.66□□□□□ -0.38
DDX56-201ENST00000258772 TMEM183AQ8IXX5 376 aa12.66□□□□□ -0.38
DDX56-201ENST00000258772 PLSCR4Q9NRQ2 329 aa12.66□□□□□ -0.38
DDX56-201ENST00000258772 TET2Q6N021 2002 aaPredicted RBP12.65□□□□□ -0.38
DDX56-201ENST00000258772 IGHV1-18A0A0C4DH31 117 aa12.65□□□□□ -0.38
DDX56-201ENST00000258772 PPP5D1E7EU14 171 aa12.65□□□□□ -0.38
DDX56-201ENST00000258772 GATCO43716 136 aaKnown RBP12.65□□□□□ -0.38
DDX56-201ENST00000258772 VENTXO95231 258 aa12.65□□□□□ -0.38
DDX56-201ENST00000258772 HRASP01112 189 aa12.65□□□□□ -0.38
DDX56-201ENST00000258772 EGR1P18146 543 aa12.65□□□□□ -0.38
DDX56-201ENST00000258772 GCSAMLQ5JQS6 135 aa12.65□□□□□ -0.38
DDX56-201ENST00000258772 PCGF1Q9BSM1 259 aa12.65□□□□□ -0.38
DDX56-201ENST00000258772 GFOD1Q9NXC2 390 aa12.65□□□□□ -0.38
DDX56-201ENST00000258772 GNG12Q9UBI6 72 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms