RNA–Protein interactions for RNA: ENST00000255622.10

PDE6B-201, Transcript of phosphodiesterase 6B, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PDE6B, Length 3,280 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6B-201ENST00000255622 GAPTQ8N292 157 aa9.58□□□□□ -0.88
PDE6B-201ENST00000255622 OR2M7Q8NG81 312 aa9.58□□□□□ -0.88
PDE6B-201ENST00000255622 YAE1D1Q9NRH1 226 aa9.58□□□□□ -0.88
PDE6B-201ENST00000255622 FUT9Q9Y231 359 aa9.58□□□□□ -0.88
PDE6B-201ENST00000255622 COL27A1Q8IZC6 1860 aaPredicted RBP9.58□□□□□ -0.88
PDE6B-201ENST00000255622 BOD1L1Q8NFC6 3051 aa9.58□□□□□ -0.88
PDE6B-201ENST00000255622 NEURL1O76050 574 aa9.58□□□□□ -0.88
PDE6B-201ENST00000255622 PPP1CCP36873 323 aaKnown RBP9.58□□□□□ -0.88
PDE6B-201ENST00000255622 LHX2P50458 406 aa9.58□□□□□ -0.88
PDE6B-201ENST00000255622 EWSR1Q01844 656 aaKnown RBP eCLIP9.58□□□□□ -0.88
PDE6B-201ENST00000255622 CXorf66Q5JRM2 361 aaPredicted RBP9.58□□□□□ -0.88
PDE6B-201ENST00000255622 NIPSNAP3BQ9BS92 247 aa9.58□□□□□ -0.88
PDE6B-201ENST00000255622 PRDM14Q9GZV8 571 aa9.58□□□□□ -0.88
PDE6B-201ENST00000255622 BORCS7-ASMTA0A0B4J1R7 106 aa9.58□□□□□ -0.88
PDE6B-201ENST00000255622 IGSF23A1L1A6 192 aa9.58□□□□□ -0.88
PDE6B-201ENST00000255622 ZNF732B4DXR9 585 aa9.58□□□□□ -0.88
PDE6B-201ENST00000255622 SYNGR1O43759 233 aa9.58□□□□□ -0.88
PDE6B-201ENST00000255622 GLIPR1P48060 266 aa9.58□□□□□ -0.88
PDE6B-201ENST00000255622 PEAR1Q5VY43 1037 aaPredicted RBP9.58□□□□□ -0.88
PDE6B-201ENST00000255622 COLCA1Q6ZS62 124 aa9.58□□□□□ -0.88
PDE6B-201ENST00000255622 PPP1R35Q8TAP8 253 aa9.58□□□□□ -0.88
PDE6B-201ENST00000255622 FAM213BQ8TBF2 198 aa9.58□□□□□ -0.88
PDE6B-201ENST00000255622 REPIN1Q9BWE0 567 aaKnown RBP9.58□□□□□ -0.88
PDE6B-201ENST00000255622 TMEM222Q9H0R3 208 aa9.58□□□□□ -0.88
PDE6B-201ENST00000255622 UBE2J1Q9Y385 318 aaPredicted RBP9.58□□□□□ -0.88
PDE6B-201ENST00000255622 CNOT1A5YKK6 2376 aaKnown RBP9.58□□□□□ -0.88
PDE6B-201ENST00000255622 LAMA5O15230 3695 aa9.58□□□□□ -0.88
PDE6B-201ENST00000255622 TMEM265A0A087WTH1 108 aa9.57□□□□□ -0.88
PDE6B-201ENST00000255622 IGKV1-6A0A0C4DH72 117 aa9.57□□□□□ -0.88
PDE6B-201ENST00000255622 OR2T8A6NH00 312 aa9.57□□□□□ -0.88
PDE6B-201ENST00000255622 OR5B21A6NL26 309 aa9.57□□□□□ -0.88
PDE6B-201ENST00000255622 ADAM20O43506 726 aa9.57□□□□□ -0.88
PDE6B-201ENST00000255622 SEC11BP0C7V7 166 aa9.57□□□□□ -0.88
PDE6B-201ENST00000255622 C20orf204Q6ZNR8 217 aa9.57□□□□□ -0.88
PDE6B-201ENST00000255622 ZNF788Q6ZQV5 615 aa9.57□□□□□ -0.88
PDE6B-201ENST00000255622 LINC00696Q6ZRV3 163 aa9.57□□□□□ -0.88
PDE6B-201ENST00000255622 CCDC71LQ8N9Z2 235 aa9.57□□□□□ -0.88
PDE6B-201ENST00000255622 TMEM171Q8WVE6 324 aa9.57□□□□□ -0.88
PDE6B-201ENST00000255622 DERL1Q9BUN8 251 aa9.57□□□□□ -0.88
PDE6B-201ENST00000255622 NGBQ9NPG2 151 aa9.57□□□□□ -0.88
PDE6B-201ENST00000255622 GATA3P23771 443 aa9.57□□□□□ -0.88
PDE6B-201ENST00000255622 IL13RA2Q14627 380 aa9.57□□□□□ -0.88
PDE6B-201ENST00000255622 IL22RA1Q8N6P7 574 aa9.57□□□□□ -0.88
PDE6B-201ENST00000255622 FER1L6-AS1Q8NA97 138 aa9.57□□□□□ -0.88
PDE6B-201ENST00000255622 ABHD17AQ96GS6 310 aa9.57□□□□□ -0.88
PDE6B-201ENST00000255622 Q9N2K0 584 aa9.57□□□□□ -0.88
PDE6B-201ENST00000255622 CCL28Q9NRJ3 127 aa9.57□□□□□ -0.88
PDE6B-201ENST00000255622 SLC22A20A6NK97 555 aa9.57□□□□□ -0.88
PDE6B-201ENST00000255622 CST7O76096 145 aa9.57□□□□□ -0.88
PDE6B-201ENST00000255622 SUMO1P63165 101 aaKnown RBP9.57□□□□□ -0.88
PDE6B-201ENST00000255622 PRSS8Q16651 343 aa9.57□□□□□ -0.88
PDE6B-201ENST00000255622 SPATA45Q537H7 98 aa9.57□□□□□ -0.88
PDE6B-201ENST00000255622 GTF2H5Q6ZYL4 71 aa9.57□□□□□ -0.88
PDE6B-201ENST00000255622 ZNF695Q8IW36 515 aa9.57□□□□□ -0.88
PDE6B-201ENST00000255622 TMEM217Q8N7C4 229 aa9.57□□□□□ -0.88
PDE6B-201ENST00000255622 TVP23CQ96ET8 276 aa9.57□□□□□ -0.88
PDE6B-201ENST00000255622 PATZ1Q9HBE1 687 aaKnown RBP9.57□□□□□ -0.88
PDE6B-201ENST00000255622 MED13Q9UHV7 2174 aa9.56□□□□□ -0.88
PDE6B-201ENST00000255622 A0A1W2PNU3 283 aaPredicted RBP9.56□□□□□ -0.88
PDE6B-201ENST00000255622 G3V4G9 280 aa9.56□□□□□ -0.88
PDE6B-201ENST00000255622 HS3ST1O14792 307 aa9.56□□□□□ -0.88
PDE6B-201ENST00000255622 TMEM50AO95807 157 aa9.56□□□□□ -0.88
PDE6B-201ENST00000255622 ESDP10768 282 aa9.56□□□□□ -0.88
PDE6B-201ENST00000255622 CCL20P78556 96 aa9.56□□□□□ -0.88
PDE6B-201ENST00000255622 PRR31Q5SQ13 230 aa9.56□□□□□ -0.88
PDE6B-201ENST00000255622 ZDHHC23Q8IYP9 409 aa9.56□□□□□ -0.88
PDE6B-201ENST00000255622 OR2C3Q8N628 320 aa9.56□□□□□ -0.88
PDE6B-201ENST00000255622 ZFP62Q8NB50 900 aaPredicted RBP9.56□□□□□ -0.88
PDE6B-201ENST00000255622 UQCR10Q9UDW1 63 aa9.56□□□□□ -0.88
PDE6B-201ENST00000255622 BOKQ9UMX3 212 aaPredicted RBP9.56□□□□□ -0.88
PDE6B-201ENST00000255622 ESPL1Q14674 2120 aa9.56□□□□□ -0.88
PDE6B-201ENST00000255622 NAPSAO96009 420 aa9.56□□□□□ -0.88
PDE6B-201ENST00000255622 NKX2-1P43699 371 aaPredicted RBP9.56□□□□□ -0.88
PDE6B-201ENST00000255622 FGF12P61328 243 aa9.56□□□□□ -0.88
PDE6B-201ENST00000255622 AESQ08117 197 aa9.56□□□□□ -0.88
PDE6B-201ENST00000255622 WDR82Q6UXN9 313 aa9.56□□□□□ -0.88
PDE6B-201ENST00000255622 CACNA1GO43497 2377 aa9.56□□□□□ -0.88
PDE6B-201ENST00000255622 CLDN34H7C241 214 aa9.55□□□□□ -0.88
PDE6B-201ENST00000255622 MPLP40238 635 aa9.55□□□□□ -0.88
PDE6B-201ENST00000255622 RPL24P83731 157 aaKnown RBP9.55□□□□□ -0.88
PDE6B-201ENST00000255622 ZNF266Q14584 549 aa9.55□□□□□ -0.88
PDE6B-201ENST00000255622 IZUMO4Q1ZYL8 232 aa9.55□□□□□ -0.88
PDE6B-201ENST00000255622 SPATA46Q5T0L3 261 aa9.55□□□□□ -0.88
PDE6B-201ENST00000255622 C1orf210Q8IVY1 113 aa9.55□□□□□ -0.88
PDE6B-201ENST00000255622 ODF3L1Q8IXM7 274 aa9.55□□□□□ -0.88
PDE6B-201ENST00000255622 TMEM256Q8N2U0 113 aa9.55□□□□□ -0.88
PDE6B-201ENST00000255622 C5orf17Q8NAS9 161 aa9.55□□□□□ -0.88
PDE6B-201ENST00000255622 OR1B1Q8NGR6 318 aa9.55□□□□□ -0.88
PDE6B-201ENST00000255622 RDH5Q92781 318 aa9.55□□□□□ -0.88
PDE6B-201ENST00000255622 C11orf1Q9H5F2 150 aa9.55□□□□□ -0.88
PDE6B-201ENST00000255622 IGKV3D-15A0A087WSY6 115 aa9.55□□□□□ -0.88
PDE6B-201ENST00000255622 IGHV3-64DA0A0J9YX35 117 aa9.55□□□□□ -0.88
PDE6B-201ENST00000255622 TRAPPC2LH3BP13 241 aa9.55□□□□□ -0.88
PDE6B-201ENST00000255622 SCGB2A1O75556 95 aa9.55□□□□□ -0.88
PDE6B-201ENST00000255622 TMEM267Q0VDI3 215 aaPredicted RBP9.55□□□□□ -0.88
PDE6B-201ENST00000255622 LTC4SQ16873 150 aa9.55□□□□□ -0.88
PDE6B-201ENST00000255622 CCDC144NLQ6NUI1 221 aa9.55□□□□□ -0.88
PDE6B-201ENST00000255622 SRSF8Q9BRL6 282 aaKnown RBP9.55□□□□□ -0.88
PDE6B-201ENST00000255622 TTTY12Q9BZ98 90 aa9.55□□□□□ -0.88
PDE6B-201ENST00000255622 CEP250Q9BV73 2442 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms