RNA–Protein interactions for RNA: ENST00000253812.7

PCDHGA3-201, Transcript of protocadherin gamma subfamily A, 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGA3, Length 4,771 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3-201ENST00000253812 FER1L6Q2WGJ9 1857 aa11.37□□□□□ -0.59
PCDHGA3-201ENST00000253812 PRSS8Q16651 343 aa11.36□□□□□ -0.59
PCDHGA3-201ENST00000253812 FAM117AQ9C073 453 aa11.36□□□□□ -0.59
PCDHGA3-201ENST00000253812 PCOLCE2Q9UKZ9 415 aa11.36□□□□□ -0.59
PCDHGA3-201ENST00000253812 COLQQ9Y215 455 aaPredicted RBP11.36□□□□□ -0.59
PCDHGA3-201ENST00000253812 C5orf67F2Z3F1 127 aa11.36□□□□□ -0.59
PCDHGA3-201ENST00000253812 TBX6O95947 436 aaPredicted RBP11.36□□□□□ -0.59
PCDHGA3-201ENST00000253812 AMBPP02760 352 aa11.36□□□□□ -0.59
PCDHGA3-201ENST00000253812 RPL31P62899 125 aaKnown RBP11.36□□□□□ -0.59
PCDHGA3-201ENST00000253812 SRSF4Q08170 494 aaKnown RBP11.36□□□□□ -0.59
PCDHGA3-201ENST00000253812 RTP5Q14D33 572 aa11.36□□□□□ -0.59
PCDHGA3-201ENST00000253812 TMEM95Q3KNT9 176 aa11.36□□□□□ -0.59
PCDHGA3-201ENST00000253812 FGF16O43320 207 aa11.36□□□□□ -0.59
PCDHGA3-201ENST00000253812 FTH1P19P0C7X4 201 aa11.36□□□□□ -0.59
PCDHGA3-201ENST00000253812 CEACAM3P40198 252 aa11.36□□□□□ -0.59
PCDHGA3-201ENST00000253812 PRSS12P56730 875 aa11.36□□□□□ -0.59
PCDHGA3-201ENST00000253812 RNPS1Q15287 305 aaKnown RBP11.36□□□□□ -0.59
PCDHGA3-201ENST00000253812 LINC01555Q8NAE3 123 aa11.36□□□□□ -0.59
PCDHGA3-201ENST00000253812 SFXN3Q9BWM7 321 aa11.36□□□□□ -0.59
PCDHGA3-201ENST00000253812 TWSG1Q9GZX9 223 aa11.36□□□□□ -0.59
PCDHGA3-201ENST00000253812 KLHDC2Q9Y2U9 406 aa11.36□□□□□ -0.59
PCDHGA3-201ENST00000253812 NPIPB6E9PJ23 425 aa11.36□□□□□ -0.59
PCDHGA3-201ENST00000253812 ATP5LO75964 103 aa11.36□□□□□ -0.59
PCDHGA3-201ENST00000253812 PATE4P0C8F1 98 aa11.36□□□□□ -0.59
PCDHGA3-201ENST00000253812 CEACAM1P13688 526 aa11.36□□□□□ -0.59
PCDHGA3-201ENST00000253812 EGR1P18146 543 aa11.36□□□□□ -0.59
PCDHGA3-201ENST00000253812 GNB2P62879 340 aa11.36□□□□□ -0.59
PCDHGA3-201ENST00000253812 ZIC1Q15915 447 aa11.36□□□□□ -0.59
PCDHGA3-201ENST00000253812 ZNF788Q6ZQV5 615 aa11.36□□□□□ -0.59
PCDHGA3-201ENST00000253812 SFTPA2Q8IWL1 248 aa11.36□□□□□ -0.59
PCDHGA3-201ENST00000253812 TMEM186Q96B77 213 aa11.36□□□□□ -0.59
PCDHGA3-201ENST00000253812 NHP2Q9NX24 153 aaKnown RBP11.36□□□□□ -0.59
PCDHGA3-201ENST00000253812 CT62P0C5K7 136 aa11.35□□□□□ -0.59
PCDHGA3-201ENST00000253812 LIMS1P48059 325 aa11.35□□□□□ -0.59
PCDHGA3-201ENST00000253812 SELENOHQ8IZQ5 122 aaKnown RBP11.35□□□□□ -0.59
PCDHGA3-201ENST00000253812 VSTM2LQ96N03 204 aa11.35□□□□□ -0.59
PCDHGA3-201ENST00000253812 SSBP3Q9BWW4 388 aaPredicted RBP11.35□□□□□ -0.59
PCDHGA3-201ENST00000253812 A0A1W2PQD3 144 aa11.35□□□□□ -0.59
PCDHGA3-201ENST00000253812 PGPEP1LA6NFU8 196 aa11.35□□□□□ -0.59
PCDHGA3-201ENST00000253812 TSPAN2O60636 221 aa11.35□□□□□ -0.59
PCDHGA3-201ENST00000253812 PSG6Q00889 435 aa11.35□□□□□ -0.59
PCDHGA3-201ENST00000253812 UNC119Q13432 240 aa11.35□□□□□ -0.59
PCDHGA3-201ENST00000253812 EIF4EBP2Q13542 120 aaPredicted RBP11.35□□□□□ -0.59
PCDHGA3-201ENST00000253812 PAPPA-AS1Q5QFB9 102 aa11.35□□□□□ -0.59
PCDHGA3-201ENST00000253812 FGFRL1Q8N441 504 aa11.35□□□□□ -0.59
PCDHGA3-201ENST00000253812 ST20Q9HBF5 79 aa11.35□□□□□ -0.59
PCDHGA3-201ENST00000253812 TRBV24-1A0A075B6N3 115 aa11.35□□□□□ -0.59
PCDHGA3-201ENST00000253812 TRAV39A0A0B4J263 110 aa11.35□□□□□ -0.59
PCDHGA3-201ENST00000253812 ACSF3Q4G176 576 aaPredicted RBP11.35□□□□□ -0.59
PCDHGA3-201ENST00000253812 C19orf48Q6RUI8 117 aa11.35□□□□□ -0.59
PCDHGA3-201ENST00000253812 RFLNBQ8N5W9 214 aa11.35□□□□□ -0.59
PCDHGA3-201ENST00000253812 GTSF1LQ9H1H1 148 aa11.35□□□□□ -0.59
PCDHGA3-201ENST00000253812 FOCADQ5VW36 1801 aa11.35□□□□□ -0.59
PCDHGA3-201ENST00000253812 ZNFX1Q9P2E3 1918 aaKnown RBP11.35□□□□□ -0.59
PCDHGA3-201ENST00000253812 CASP8AP2Q9UKL3 1982 aa11.35□□□□□ -0.59
PCDHGA3-201ENST00000253812 LIPT2A6NK58 231 aa11.35□□□□□ -0.59
PCDHGA3-201ENST00000253812 CEACAM18A8MTB9 384 aa11.35□□□□□ -0.59
PCDHGA3-201ENST00000253812 KLF4O43474 513 aa11.35□□□□□ -0.59
PCDHGA3-201ENST00000253812 SSTR5P35346 364 aa11.35□□□□□ -0.59
PCDHGA3-201ENST00000253812 TMEM249Q2WGJ8 235 aa11.35□□□□□ -0.59
PCDHGA3-201ENST00000253812 VN1R4Q7Z5H5 301 aa11.35□□□□□ -0.59
PCDHGA3-201ENST00000253812 DMRTA2Q96SC8 542 aa11.35□□□□□ -0.59
PCDHGA3-201ENST00000253812 ZPBPQ9BS86 351 aa11.35□□□□□ -0.59
PCDHGA3-201ENST00000253812 SARGQ9BW04 601 aa11.35□□□□□ -0.59
PCDHGA3-201ENST00000253812 TMEM187Q14656 261 aa11.34□□□□□ -0.59
PCDHGA3-201ENST00000253812 GAGE13Q4V321 117 aa11.34□□□□□ -0.59
PCDHGA3-201ENST00000253812 CLDND2Q8NHS1 167 aa11.34□□□□□ -0.59
PCDHGA3-201ENST00000253812 SCN4AP35499 1836 aa11.34□□□□□ -0.59
PCDHGA3-201ENST00000253812 GOLGB1Q14789 3259 aaKnown RBP11.34□□□□□ -0.59
PCDHGA3-201ENST00000253812 PGLYRP1O75594 196 aaPredicted RBP11.34□□□□□ -0.59
PCDHGA3-201ENST00000253812 GCHFRP30047 84 aa11.34□□□□□ -0.59
PCDHGA3-201ENST00000253812 UCP3P55916 312 aa11.34□□□□□ -0.59
PCDHGA3-201ENST00000253812 P2RY6Q15077 328 aa11.34□□□□□ -0.59
PCDHGA3-201ENST00000253812 C19orf54Q5BKX5 351 aa11.34□□□□□ -0.59
PCDHGA3-201ENST00000253812 WIPI1Q5MNZ9 446 aaPredicted RBP11.34□□□□□ -0.59
PCDHGA3-201ENST00000253812 OR13C6PQ8NH95 151 aa11.34□□□□□ -0.59
PCDHGA3-201ENST00000253812 SP7Q8TDD2 431 aaPredicted RBP11.34□□□□□ -0.59
PCDHGA3-201ENST00000253812 C11orf68Q9H3H3 251 aaKnown RBP11.34□□□□□ -0.59
PCDHGA3-201ENST00000253812 A0A1W2PP11 408 aa11.34□□□□□ -0.59
PCDHGA3-201ENST00000253812 LILRA5A6NI73 299 aa11.34□□□□□ -0.59
PCDHGA3-201ENST00000253812 K7EQS6 105 aa11.34□□□□□ -0.59
PCDHGA3-201ENST00000253812 CDIPTO14735 213 aa11.34□□□□□ -0.59
PCDHGA3-201ENST00000253812 TFF2Q03403 129 aa11.34□□□□□ -0.59
PCDHGA3-201ENST00000253812 GCSAMLQ5JQS6 135 aa11.34□□□□□ -0.59
PCDHGA3-201ENST00000253812 MBNL2Q5VZF2 373 aaKnown RBP11.34□□□□□ -0.59
PCDHGA3-201ENST00000253812 UNQ5815/PRO19632Q6UWF5 114 aa11.34□□□□□ -0.59
PCDHGA3-201ENST00000253812 ZADH2Q8N4Q0 377 aa11.34□□□□□ -0.59
PCDHGA3-201ENST00000253812 NRTNQ99748 197 aa11.34□□□□□ -0.59
PCDHGA3-201ENST00000253812 TRAV14DV4A0A0A6YYC5 116 aa11.33□□□□□ -0.59
PCDHGA3-201ENST00000253812 A0A0U1RQV5 110 aa11.33□□□□□ -0.59
PCDHGA3-201ENST00000253812 A8MWV9 139 aa11.33□□□□□ -0.59
PCDHGA3-201ENST00000253812 ITGB1BP1O14713 200 aa11.33□□□□□ -0.59
PCDHGA3-201ENST00000253812 UPK3AO75631 287 aa11.33□□□□□ -0.59
PCDHGA3-201ENST00000253812 C6orf15Q6UXA7 325 aaPredicted RBP11.33□□□□□ -0.59
PCDHGA3-201ENST00000253812 OR4C13Q8NGP0 309 aa11.33□□□□□ -0.59
PCDHGA3-201ENST00000253812 GNRHR2Q96P88 292 aa11.33□□□□□ -0.59
PCDHGA3-201ENST00000253812 POU2F2P09086 479 aa11.33□□□□□ -0.6
PCDHGA3-201ENST00000253812 ESDP10768 282 aa11.33□□□□□ -0.6
PCDHGA3-201ENST00000253812 RPL23P62829 140 aaKnown RBP11.33□□□□□ -0.6
PCDHGA3-201ENST00000253812 MESP2Q0VG99 397 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms