RNA–Protein interactions for RNA: ENST00000252444.9

LDLR-201, Transcript of low density lipoprotein receptor, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene LDLR, Length 5,337 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-201ENST00000252444 GPX4P36969 197 aaPredicted RBP11.48□□□□□ -0.57
LDLR-201ENST00000252444 LYZP61626 148 aa11.48□□□□□ -0.57
LDLR-201ENST00000252444 GPR82Q96P67 336 aa11.48□□□□□ -0.57
LDLR-201ENST00000252444 RBKSQ9H477 322 aa11.48□□□□□ -0.57
LDLR-201ENST00000252444 VSIG10L2P0DP72 767 aa11.48□□□□□ -0.57
LDLR-201ENST00000252444 ZNF474Q6S9Z5 364 aaPredicted RBP11.48□□□□□ -0.57
LDLR-201ENST00000252444 PQLC2Q6ZP29 291 aa11.48□□□□□ -0.57
LDLR-201ENST00000252444 J3QLI3 93 aa11.48□□□□□ -0.57
LDLR-201ENST00000252444 ORM1P02763 201 aa11.48□□□□□ -0.57
LDLR-201ENST00000252444 CFHR2P36980 270 aa11.48□□□□□ -0.57
LDLR-201ENST00000252444 AANATQ16613 207 aa11.48□□□□□ -0.57
LDLR-201ENST00000252444 WDR73Q6P4I2 378 aa11.48□□□□□ -0.57
LDLR-201ENST00000252444 LRTM2Q8N967 370 aa11.48□□□□□ -0.57
LDLR-201ENST00000252444 CTDSP1Q9GZU7 261 aa11.48□□□□□ -0.57
LDLR-201ENST00000252444 BEX4Q9NWD9 120 aaPredicted RBP11.48□□□□□ -0.57
LDLR-201ENST00000252444 IGKV1-9A0A0C4DH69 117 aa11.47□□□□□ -0.57
LDLR-201ENST00000252444 RNASEK-C17orf49H0YIS7 233 aa11.47□□□□□ -0.57
LDLR-201ENST00000252444 SLC25A5P05141 298 aaKnown RBP11.47□□□□□ -0.57
LDLR-201ENST00000252444 UBE2L3P68036 154 aaKnown RBP11.47□□□□□ -0.57
LDLR-201ENST00000252444 SMAGPQ0VAQ4 97 aa11.47□□□□□ -0.57
LDLR-201ENST00000252444 GPR146Q96CH1 333 aa11.47□□□□□ -0.57
LDLR-201ENST00000252444 NINQ8N4C6 2090 aa11.47□□□□□ -0.57
LDLR-201ENST00000252444 TMEM131Q92545 1883 aa11.47□□□□□ -0.57
LDLR-201ENST00000252444 CEACAM18A8MTB9 384 aa11.47□□□□□ -0.57
LDLR-201ENST00000252444 KIAA1324LA8MWY0 1029 aaPredicted RBP11.47□□□□□ -0.57
LDLR-201ENST00000252444 B4DSR2 109 aa11.47□□□□□ -0.57
LDLR-201ENST00000252444 PPP5D1E7EU14 171 aa11.47□□□□□ -0.57
LDLR-201ENST00000252444 ZNF737O75373 536 aa11.47□□□□□ -0.57
LDLR-201ENST00000252444 ERVS71-1P61550 626 aa11.47□□□□□ -0.57
LDLR-201ENST00000252444 B2MP61769 119 aa11.47□□□□□ -0.57
LDLR-201ENST00000252444 H3BP45 60 aa11.47□□□□□ -0.57
LDLR-201ENST00000252444 M6PRP20645 277 aa11.47□□□□□ -0.57
LDLR-201ENST00000252444 ZFP82Q8N141 532 aa11.47□□□□□ -0.57
LDLR-201ENST00000252444 SSX3Q99909 188 aa11.47□□□□□ -0.57
LDLR-201ENST00000252444 KIR3DL3Q8N743 410 aa11.47□□□□□ -0.57
LDLR-201ENST00000252444 HEPN1Q6WQI6 88 aa11.46□□□□□ -0.57
LDLR-201ENST00000252444 C16orf82Q7Z2V1 217 aa11.46□□□□□ -0.57
LDLR-201ENST00000252444 DYNLRB2Q8TF09 96 aa11.46□□□□□ -0.57
LDLR-201ENST00000252444 NPFFR1Q9GZQ6 430 aa11.46□□□□□ -0.57
LDLR-201ENST00000252444 NAT8Q9UHE5 227 aa11.46□□□□□ -0.57
LDLR-201ENST00000252444 RHBDL1O75783 438 aa11.46□□□□□ -0.57
LDLR-201ENST00000252444 TNFSF13O75888 250 aa11.46□□□□□ -0.57
LDLR-201ENST00000252444 UNQ5815/PRO19632Q6UWF5 114 aa11.46□□□□□ -0.57
LDLR-201ENST00000252444 ZNF818PQ6ZRF7 136 aa11.46□□□□□ -0.57
LDLR-201ENST00000252444 OR11H7Q8NGC8 314 aa11.46□□□□□ -0.57
LDLR-201ENST00000252444 TCF19Q9Y242 345 aa11.46□□□□□ -0.57
LDLR-201ENST00000252444 CHEK1O14757 476 aa11.46□□□□□ -0.57
LDLR-201ENST00000252444 SLC35E3Q7Z769 313 aa11.46□□□□□ -0.57
LDLR-201ENST00000252444 C9orf62Q8N4C0 152 aa11.46□□□□□ -0.57
LDLR-201ENST00000252444 GNG4P50150 75 aa11.46□□□□□ -0.58
LDLR-201ENST00000252444 ARF6P62330 175 aa11.46□□□□□ -0.58
LDLR-201ENST00000252444 TMEM241Q24JQ0 296 aa11.46□□□□□ -0.58
LDLR-201ENST00000252444 ANKRD55Q3KP44 614 aa11.46□□□□□ -0.58
LDLR-201ENST00000252444 OR4X1Q8NH49 305 aa11.46□□□□□ -0.58
LDLR-201ENST00000252444 IGSF23A1L1A6 192 aa11.45□□□□□ -0.58
LDLR-201ENST00000252444 HELTA6NFD8 242 aa11.45□□□□□ -0.58
LDLR-201ENST00000252444 J3QKU1 62 aa11.45□□□□□ -0.58
LDLR-201ENST00000252444 ZNF205O95201 554 aa11.45□□□□□ -0.58
LDLR-201ENST00000252444 CYB5R2Q6BCY4 276 aa11.45□□□□□ -0.58
LDLR-201ENST00000252444 TMEM252Q8N6L7 170 aa11.45□□□□□ -0.58
LDLR-201ENST00000252444 OR13A1Q8NGR1 328 aa11.45□□□□□ -0.58
LDLR-201ENST00000252444 COL5A1P20908 1838 aaPredicted RBP11.45□□□□□ -0.58
LDLR-201ENST00000252444 A6NNC1 897 aa11.45□□□□□ -0.58
LDLR-201ENST00000252444 S1PR2O95136 353 aa11.45□□□□□ -0.58
LDLR-201ENST00000252444 CMC4P56277 68 aaPredicted RBP11.45□□□□□ -0.58
LDLR-201ENST00000252444 HAGHQ16775 308 aa11.45□□□□□ -0.58
LDLR-201ENST00000252444 OR1B1Q8NGR6 318 aa11.45□□□□□ -0.58
LDLR-201ENST00000252444 SMIM17P0DL12 118 aa11.45□□□□□ -0.58
LDLR-201ENST00000252444 RCC1P18754 421 aaPredicted RBP11.45□□□□□ -0.58
LDLR-201ENST00000252444 KLK2P20151 261 aa11.45□□□□□ -0.58
LDLR-201ENST00000252444 ZNF90Q03938 601 aa11.45□□□□□ -0.58
LDLR-201ENST00000252444 MYPOPQ86VE0 399 aaPredicted RBP11.45□□□□□ -0.58
LDLR-201ENST00000252444 RPUSD1Q9UJJ7 312 aaKnown RBP11.45□□□□□ -0.58
LDLR-201ENST00000252444 CD5P06127 495 aa11.45□□□□□ -0.58
LDLR-201ENST00000252444 CEBPDP49716 269 aaPredicted RBP11.45□□□□□ -0.58
LDLR-201ENST00000252444 SIRT7Q9NRC8 400 aa11.45□□□□□ -0.58
LDLR-201ENST00000252444 ZNF257Q9Y2Q1 563 aa11.45□□□□□ -0.58
LDLR-201ENST00000252444 A0A0U1RQK1 487 aa11.44□□□□□ -0.58
LDLR-201ENST00000252444 H0YL77 283 aa11.44□□□□□ -0.58
LDLR-201ENST00000252444 SULT1A2P50226 295 aa11.44□□□□□ -0.58
LDLR-201ENST00000252444 ANGPTL6Q8NI99 470 aa11.44□□□□□ -0.58
LDLR-201ENST00000252444 NPAS1Q99742 590 aa11.44□□□□□ -0.58
LDLR-201ENST00000252444 BET1LQ9NYM9 111 aa11.44□□□□□ -0.58
LDLR-201ENST00000252444 LRRK1Q38SD2 2015 aa11.44□□□□□ -0.58
LDLR-201ENST00000252444 TRAV24A0A0B4J272 114 aa11.44□□□□□ -0.58
LDLR-201ENST00000252444 MORN2Q502X0 79 aa11.44□□□□□ -0.58
LDLR-201ENST00000252444 OR4D10Q8NGI6 311 aa11.44□□□□□ -0.58
LDLR-201ENST00000252444 RBFOX3A6NFN3 312 aa11.44□□□□□ -0.58
LDLR-201ENST00000252444 OR2C1O95371 312 aa11.44□□□□□ -0.58
LDLR-201ENST00000252444 RPL7P18124 248 aaKnown RBP11.44□□□□□ -0.58
LDLR-201ENST00000252444 ECSCRQ19T08 205 aa11.44□□□□□ -0.58
LDLR-201ENST00000252444 MDC1Q14676 2089 aaKnown RBP11.44□□□□□ -0.58
LDLR-201ENST00000252444 SLC16A13Q7RTY0 426 aa11.44□□□□□ -0.58
LDLR-201ENST00000252444 C1QL2Q7Z5L3 287 aa11.44□□□□□ -0.58
LDLR-201ENST00000252444 FAM216BQ8N7L0 139 aa11.44□□□□□ -0.58
LDLR-201ENST00000252444 HABP2Q14520 560 aaPredicted RBP11.43□□□□□ -0.58
LDLR-201ENST00000252444 FGFBP3Q8TAT2 258 aa11.43□□□□□ -0.58
LDLR-201ENST00000252444 RABAC1Q9UI14 185 aa11.43□□□□□ -0.58
LDLR-201ENST00000252444 GAB2Q9UQC2 676 aa11.43□□□□□ -0.58
LDLR-201ENST00000252444 G0S2P27469 103 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 101.1 ms