RNA–Protein interactions for RNA: ENST00000230085.12

SNX3-201, Transcript of sorting nexin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX3, Length 1,755 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-201ENST00000230085 SLC38A11Q08AI6 406 aa17.24■□□□□ 0.35
SNX3-201ENST00000230085 ADIRFQ15847 76 aa17.24■□□□□ 0.35
SNX3-201ENST00000230085 C1orf185Q5T7R7 199 aa17.24■□□□□ 0.35
SNX3-201ENST00000230085 MED12LQ86YW9 2145 aa17.24■□□□□ 0.35
SNX3-201ENST00000230085 DIRC2Q96SL1 478 aa17.24■□□□□ 0.35
SNX3-201ENST00000230085 LAMP3Q9UQV4 416 aa17.24■□□□□ 0.35
SNX3-201ENST00000230085 DIDO1Q9BTC0 2240 aaKnown RBP17.23■□□□□ 0.35
SNX3-201ENST00000230085 CCL21O00585 134 aa17.23■□□□□ 0.35
SNX3-201ENST00000230085 TNFSF12O43508 249 aa17.23■□□□□ 0.35
SNX3-201ENST00000230085 GZMHP20718 246 aa17.23■□□□□ 0.35
SNX3-201ENST00000230085 FGF8P55075 233 aaPredicted RBP17.23■□□□□ 0.35
SNX3-201ENST00000230085 OR51H1Q8NH63 302 aa17.23■□□□□ 0.35
SNX3-201ENST00000230085 MISP3Q96FF7 219 aa17.23■□□□□ 0.35
SNX3-201ENST00000230085 LURAP1Q96LR2 239 aa17.23■□□□□ 0.35
SNX3-201ENST00000230085 TMEM147Q9BVK8 224 aa17.23■□□□□ 0.35
SNX3-201ENST00000230085 OR51I2Q9H344 312 aa17.23■□□□□ 0.35
SNX3-201ENST00000230085 CLCF1Q9UBD9 225 aa17.23■□□□□ 0.35
SNX3-201ENST00000230085 TMPRSS2O15393 492 aa17.23■□□□□ 0.35
SNX3-201ENST00000230085 NDUFB7P17568 137 aa17.23■□□□□ 0.35
SNX3-201ENST00000230085 MDKP21741 143 aaPredicted RBP17.23■□□□□ 0.35
SNX3-201ENST00000230085 IQCJQ1A5X6 159 aa17.23■□□□□ 0.35
SNX3-201ENST00000230085 BEND4Q6ZU67 534 aa17.23■□□□□ 0.35
SNX3-201ENST00000230085 FAM58AQ8N1B3 248 aa17.23■□□□□ 0.35
SNX3-201ENST00000230085 VKORC1Q9BQB6 163 aa17.23■□□□□ 0.35
SNX3-201ENST00000230085 PARLQ9H300 379 aa17.23■□□□□ 0.35
SNX3-201ENST00000230085 MBNL3Q9NUK0 354 aaKnown RBP17.23■□□□□ 0.35
SNX3-201ENST00000230085 IL36RNQ9UBH0 155 aa17.23■□□□□ 0.35
SNX3-201ENST00000230085 GAB2Q9UQC2 676 aa17.23■□□□□ 0.35
SNX3-201ENST00000230085 DOCK7Q96N67 2140 aa17.22■□□□□ 0.35
SNX3-201ENST00000230085 NXPH3O95157 252 aa17.22■□□□□ 0.35
SNX3-201ENST00000230085 IGKV1D-33P01593 117 aa17.22■□□□□ 0.35
SNX3-201ENST00000230085 IGKV1-33P01594 117 aa17.22■□□□□ 0.35
SNX3-201ENST00000230085 CD55P08174 381 aa17.22■□□□□ 0.35
SNX3-201ENST00000230085 GNG3P63215 75 aa17.22■□□□□ 0.35
SNX3-201ENST00000230085 CHD3Q12873 2000 aaKnown RBP17.22■□□□□ 0.35
SNX3-201ENST00000230085 Q6P435 159 aa17.22■□□□□ 0.35
SNX3-201ENST00000230085 ZNF66Q6ZN08 573 aa17.22■□□□□ 0.35
SNX3-201ENST00000230085 DMRTC2Q8IXT2 367 aaPredicted RBP17.22■□□□□ 0.35
SNX3-201ENST00000230085 TCTEX1D1Q8N7M0 179 aa17.22■□□□□ 0.35
SNX3-201ENST00000230085 OR2T10Q8NGZ9 312 aa17.22■□□□□ 0.35
SNX3-201ENST00000230085 MLNRO43193 412 aa17.21■□□□□ 0.35
SNX3-201ENST00000230085 NUTF2P61970 127 aaKnown RBP17.21■□□□□ 0.35
SNX3-201ENST00000230085 TNFRSF9Q07011 255 aa17.21■□□□□ 0.35
SNX3-201ENST00000230085 C9orf106Q8NAJ2 232 aa17.21■□□□□ 0.35
SNX3-201ENST00000230085 PRRG4Q9BZD6 226 aa17.21■□□□□ 0.35
SNX3-201ENST00000230085 CRIM1Q9NZV1 1036 aa17.21■□□□□ 0.35
SNX3-201ENST00000230085 WIPI2Q9Y4P8 454 aa17.21■□□□□ 0.35
SNX3-201ENST00000230085 KIAA2026Q5HYC2 2103 aa17.21■□□□□ 0.34
SNX3-201ENST00000230085 PMS2P5A8MQ11 134 aa17.2■□□□□ 0.34
SNX3-201ENST00000230085 SYNGR1O43759 233 aa17.2■□□□□ 0.34
SNX3-201ENST00000230085 SYNGR4O95473 234 aa17.2■□□□□ 0.34
SNX3-201ENST00000230085 IAPPP10997 89 aa17.2■□□□□ 0.34
SNX3-201ENST00000230085 ARR3P36575 388 aa17.2■□□□□ 0.34
SNX3-201ENST00000230085 KCNIP4Q6PIL6 250 aa17.2■□□□□ 0.34
SNX3-201ENST00000230085 ZNF497Q6ZNH5 498 aa17.2■□□□□ 0.34
SNX3-201ENST00000230085 TMEM144Q7Z5S9 345 aa17.2■□□□□ 0.34
SNX3-201ENST00000230085 Q8IYB0 196 aa17.2■□□□□ 0.34
SNX3-201ENST00000230085 NEIL1Q96FI4 390 aaPredicted RBP17.2■□□□□ 0.34
SNX3-201ENST00000230085 MBD3L4A6NDZ8 208 aaPredicted RBP17.2■□□□□ 0.34
SNX3-201ENST00000230085 MBD3L3A6NE82 208 aaPredicted RBP17.2■□□□□ 0.34
SNX3-201ENST00000230085 MBD3L5A6NJ08 208 aaPredicted RBP17.2■□□□□ 0.34
SNX3-201ENST00000230085 J3QKU1 62 aa17.2■□□□□ 0.34
SNX3-201ENST00000230085 ARF1P84077 181 aaKnown RBP17.2■□□□□ 0.34
SNX3-201ENST00000230085 ACSM6Q6P461 480 aa17.2■□□□□ 0.34
SNX3-201ENST00000230085 GBGT1Q8N5D6 347 aa17.2■□□□□ 0.34
SNX3-201ENST00000230085 MBD3L2Q8NHZ7 208 aaPredicted RBP17.2■□□□□ 0.34
SNX3-201ENST00000230085 ABHD3Q8WU67 409 aa17.2■□□□□ 0.34
SNX3-201ENST00000230085 RAB1CQ92928 201 aa17.2■□□□□ 0.34
SNX3-201ENST00000230085 POM121L2Q96KW2 1035 aa17.2■□□□□ 0.34
SNX3-201ENST00000230085 TXNDC17Q9BRA2 123 aa17.2■□□□□ 0.34
SNX3-201ENST00000230085 J3QT63 122 aa17.19■□□□□ 0.34
SNX3-201ENST00000230085 TIMP3P35625 211 aa17.19■□□□□ 0.34
SNX3-201ENST00000230085 GCNT2Q8N0V5 402 aa17.19■□□□□ 0.34
SNX3-201ENST00000230085 COL12A1Q99715 3063 aa17.19■□□□□ 0.34
SNX3-201ENST00000230085 KIR2DL5BA0A0G2JN68 375 aa17.18■□□□□ 0.34
SNX3-201ENST00000230085 KIR2DL5BA0A0G2JPC4 375 aa17.18■□□□□ 0.34
SNX3-201ENST00000230085 UBE2L5PA0A1B0GUS4 154 aa17.18■□□□□ 0.34
SNX3-201ENST00000230085 J3QW42 95 aa17.18■□□□□ 0.34
SNX3-201ENST00000230085 SLC33A1O00400 549 aaPredicted RBP17.18■□□□□ 0.34
SNX3-201ENST00000230085 COX5AP20674 150 aa17.18■□□□□ 0.34
SNX3-201ENST00000230085 FOXL1Q12952 345 aa17.18■□□□□ 0.34
SNX3-201ENST00000230085 EIF4EBP1Q13541 118 aaPredicted RBP17.18■□□□□ 0.34
SNX3-201ENST00000230085 KIR2DL5AQ8N109 375 aa17.18■□□□□ 0.34
SNX3-201ENST00000230085 CIB3Q96Q77 187 aaPredicted RBP17.18■□□□□ 0.34
SNX3-201ENST00000230085 INTS1Q8N201 2190 aaKnown RBP17.18■□□□□ 0.34
SNX3-201ENST00000230085 MYO18BQ8IUG5 2567 aa17.18■□□□□ 0.34
SNX3-201ENST00000230085 MRPL33O75394 65 aaKnown RBP17.17■□□□□ 0.34
SNX3-201ENST00000230085 GYPAP02724 150 aa17.17■□□□□ 0.34
SNX3-201ENST00000230085 RPL15P61313 204 aaKnown RBP17.17■□□□□ 0.34
SNX3-201ENST00000230085 P2RY6Q15077 328 aa17.17■□□□□ 0.34
SNX3-201ENST00000230085 SPANXN5Q5MJ07 72 aa17.17■□□□□ 0.34
SNX3-201ENST00000230085 PCGF1Q9BSM1 259 aa17.17■□□□□ 0.34
SNX3-201ENST00000230085 OR1A1Q9P1Q5 309 aa17.17■□□□□ 0.34
SNX3-201ENST00000230085 A0A0G2JNJ9 132 aa17.17■□□□□ 0.34
SNX3-201ENST00000230085 ANKRD30BLA7E2S9 258 aa17.17■□□□□ 0.34
SNX3-201ENST00000230085 PDE6DO43924 150 aa17.17■□□□□ 0.34
SNX3-201ENST00000230085 CEACAM8P31997 349 aaPredicted RBP17.17■□□□□ 0.34
SNX3-201ENST00000230085 FOXF2Q12947 444 aa17.17■□□□□ 0.34
SNX3-201ENST00000230085 IZUMO4Q1ZYL8 232 aa17.17■□□□□ 0.34
SNX3-201ENST00000230085 C1orf194Q5T5A4 169 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms