RNA–Protein interactions for RNA: ENST00000229307.8

NANOG-201, Transcript of Nanog homeobox, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NANOG, Length 5,183 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NANOG-201ENST00000229307 APELAP0DMC3 54 aa6.72□□□□□ -1.33
NANOG-201ENST00000229307 AARDQ4LEZ3 155 aa6.72□□□□□ -1.33
NANOG-201ENST00000229307 BTNL8Q6UX41 500 aa6.72□□□□□ -1.33
NANOG-201ENST00000229307 ARL6IP6Q8N6S5 226 aa6.72□□□□□ -1.33
NANOG-201ENST00000229307 BLNKQ8WV28 456 aa6.72□□□□□ -1.33
NANOG-201ENST00000229307 GTF3AQ92664 365 aaKnown RBP6.72□□□□□ -1.33
NANOG-201ENST00000229307 SLC25A33Q9BSK2 321 aa6.72□□□□□ -1.33
NANOG-201ENST00000229307 MIXL1Q9H2W2 232 aa6.72□□□□□ -1.33
NANOG-201ENST00000229307 ZNF727A8MUV8 499 aa6.72□□□□□ -1.33
NANOG-201ENST00000229307 SRRM5B3KS81 715 aa6.72□□□□□ -1.33
NANOG-201ENST00000229307 SMLR1H3BR10 107 aa6.72□□□□□ -1.33
NANOG-201ENST00000229307 MAS1LP35410 378 aa6.72□□□□□ -1.33
NANOG-201ENST00000229307 FOXL2NBQ6ZUU3 175 aa6.72□□□□□ -1.33
NANOG-201ENST00000229307 HIST2H3AQ71DI3 136 aa6.72□□□□□ -1.33
NANOG-201ENST00000229307 PPP1R27Q86WC6 154 aa6.72□□□□□ -1.33
NANOG-201ENST00000229307 OR5B3Q8NH48 314 aa6.72□□□□□ -1.33
NANOG-201ENST00000229307 MITD1Q8WV92 249 aa6.72□□□□□ -1.33
NANOG-201ENST00000229307 LEAP2Q969E1 77 aa6.72□□□□□ -1.33
NANOG-201ENST00000229307 LINC00052Q96N35 136 aa6.72□□□□□ -1.33
NANOG-201ENST00000229307 PRORYQ9H606 182 aa6.72□□□□□ -1.33
NANOG-201ENST00000229307 PLSCR3Q9NRY6 295 aa6.72□□□□□ -1.33
NANOG-201ENST00000229307 CEP250Q9BV73 2442 aa6.72□□□□□ -1.33
NANOG-201ENST00000229307 KRBOX1C9JBD0 128 aa6.72□□□□□ -1.33
NANOG-201ENST00000229307 LYNX1G3V0Z9 82 aa6.72□□□□□ -1.33
NANOG-201ENST00000229307 MPDU1O75352 247 aa6.72□□□□□ -1.33
NANOG-201ENST00000229307 LYNX1P0DP58 116 aa6.72□□□□□ -1.33
NANOG-201ENST00000229307 VSIG10L2P0DP72 767 aa6.72□□□□□ -1.33
NANOG-201ENST00000229307 SLC6A1P30531 599 aa6.72□□□□□ -1.33
NANOG-201ENST00000229307 OR4D10Q8NGI6 311 aa6.72□□□□□ -1.33
NANOG-201ENST00000229307 NPVFQ9HCQ7 196 aa6.72□□□□□ -1.33
NANOG-201ENST00000229307 TRAV40A0A0B4J280 105 aa6.72□□□□□ -1.33
NANOG-201ENST00000229307 SSTP61278 116 aa6.72□□□□□ -1.33
NANOG-201ENST00000229307 HAGHQ16775 308 aa6.72□□□□□ -1.33
NANOG-201ENST00000229307 WFDC3Q8IUB2 231 aa6.72□□□□□ -1.33
NANOG-201ENST00000229307 OR13A1Q8NGR1 328 aa6.72□□□□□ -1.33
NANOG-201ENST00000229307 FGFBP3Q8TAT2 258 aa6.72□□□□□ -1.33
NANOG-201ENST00000229307 MARVELD1Q9BSK0 173 aa6.72□□□□□ -1.33
NANOG-201ENST00000229307 V9GYH0 126 aa6.72□□□□□ -1.33
NANOG-201ENST00000229307 FANCMQ8IYD8 2048 aa6.72□□□□□ -1.33
NANOG-201ENST00000229307 E7EQL1 145 aa6.71□□□□□ -1.33
NANOG-201ENST00000229307 MFNGO00587 321 aa6.71□□□□□ -1.33
NANOG-201ENST00000229307 YPEL1O60688 119 aa6.71□□□□□ -1.33
NANOG-201ENST00000229307 RAB4AP20338 218 aa6.71□□□□□ -1.33
NANOG-201ENST00000229307 DYNLT3P51808 116 aa6.71□□□□□ -1.33
NANOG-201ENST00000229307 FOXG1P55316 489 aaPredicted RBP6.71□□□□□ -1.33
NANOG-201ENST00000229307 ADIPOQQ15848 244 aa6.71□□□□□ -1.33
NANOG-201ENST00000229307 HIST3H3Q16695 136 aa6.71□□□□□ -1.33
NANOG-201ENST00000229307 WDR25Q64LD2 544 aaPredicted RBP6.71□□□□□ -1.33
NANOG-201ENST00000229307 LYZL2Q7Z4W2 148 aa6.71□□□□□ -1.33
NANOG-201ENST00000229307 TCTE3Q8IZS6 198 aa6.71□□□□□ -1.33
NANOG-201ENST00000229307 LHFPL5Q8TAF8 219 aa6.71□□□□□ -1.33
NANOG-201ENST00000229307 SPSB4Q96A44 273 aa6.71□□□□□ -1.33
NANOG-201ENST00000229307 RAX2Q96IS3 184 aa6.71□□□□□ -1.33
NANOG-201ENST00000229307 YPEL2Q96QA6 119 aa6.71□□□□□ -1.33
NANOG-201ENST00000229307 WNT2P09544 360 aa6.71□□□□□ -1.34
NANOG-201ENST00000229307 IZUMO4Q1ZYL8 232 aa6.71□□□□□ -1.34
NANOG-201ENST00000229307 MOGAT2Q3SYC2 334 aa6.71□□□□□ -1.34
NANOG-201ENST00000229307 FAM162BQ5T6X4 162 aa6.71□□□□□ -1.34
NANOG-201ENST00000229307 SSX7Q7RTT5 188 aa6.71□□□□□ -1.34
NANOG-201ENST00000229307 LRP11Q86VZ4 500 aa6.71□□□□□ -1.34
NANOG-201ENST00000229307 ARPC1AQ92747 370 aa6.71□□□□□ -1.34
NANOG-201ENST00000229307 GPR61Q9BZJ8 451 aa6.71□□□□□ -1.34
NANOG-201ENST00000229307 MAP1LC3B2A6NCE7 125 aa6.71□□□□□ -1.34
NANOG-201ENST00000229307 HELTA6NFD8 242 aa6.71□□□□□ -1.34
NANOG-201ENST00000229307 MARCH11A6NNE9 402 aa6.71□□□□□ -1.34
NANOG-201ENST00000229307 SSMEM1Q8WWF3 244 aa6.71□□□□□ -1.34
NANOG-201ENST00000229307 BSCL2Q96G97 398 aaPredicted RBP6.71□□□□□ -1.34
NANOG-201ENST00000229307 MS4A10Q96PG2 267 aa6.71□□□□□ -1.34
NANOG-201ENST00000229307 CABLES2Q9BTV7 478 aa6.71□□□□□ -1.34
NANOG-201ENST00000229307 MAP1LC3BQ9GZQ8 125 aa6.71□□□□□ -1.34
NANOG-201ENST00000229307 VSIG4Q9Y279 399 aa6.71□□□□□ -1.34
NANOG-201ENST00000229307 J3QLI3 93 aa6.71□□□□□ -1.34
NANOG-201ENST00000229307 PPP1R2P9O14990 202 aa6.71□□□□□ -1.34
NANOG-201ENST00000229307 ADAP1O75689 374 aa6.71□□□□□ -1.34
NANOG-201ENST00000229307 TNFSF13O75888 250 aa6.71□□□□□ -1.34
NANOG-201ENST00000229307 HIST1H3AP68431 136 aa6.71□□□□□ -1.34
NANOG-201ENST00000229307 LINC00518Q8N0U6 118 aa6.71□□□□□ -1.34
NANOG-201ENST00000229307 ZCCHC24Q8N2G6 241 aaKnown RBP6.71□□□□□ -1.34
NANOG-201ENST00000229307 FGFRL1Q8N441 504 aa6.71□□□□□ -1.34
NANOG-201ENST00000229307 ZNRF4Q8WWF5 429 aa6.71□□□□□ -1.34
NANOG-201ENST00000229307 PARP12Q9H0J9 701 aaKnown RBP6.71□□□□□ -1.34
NANOG-201ENST00000229307 ZNF430Q9H8G1 570 aaPredicted RBP6.71□□□□□ -1.34
NANOG-201ENST00000229307 PROK2Q9HC23 129 aa6.71□□□□□ -1.34
NANOG-201ENST00000229307 SERTM2A0A1B0GWG4 89 aa6.7□□□□□ -1.34
NANOG-201ENST00000229307 H7BYZ3 331 aa6.7□□□□□ -1.34
NANOG-201ENST00000229307 NBR2O15453 112 aa6.7□□□□□ -1.34
NANOG-201ENST00000229307 PTBP3O95758 552 aaKnown RBP6.7□□□□□ -1.34
NANOG-201ENST00000229307 WT1P19544 449 aaPredicted RBP6.7□□□□□ -1.34
NANOG-201ENST00000229307 GAMTQ14353 236 aa6.7□□□□□ -1.34
NANOG-201ENST00000229307 EFNB3Q15768 340 aa6.7□□□□□ -1.34
NANOG-201ENST00000229307 OR4A47Q6IF82 309 aa6.7□□□□□ -1.34
NANOG-201ENST00000229307 OR10J6PQ8NGY7 276 aa6.7□□□□□ -1.34
NANOG-201ENST00000229307 RPUSD4Q96CM3 377 aaKnown RBP6.7□□□□□ -1.34
NANOG-201ENST00000229307 SMIM7Q9BQ49 75 aa6.7□□□□□ -1.34
NANOG-201ENST00000229307 MANBALQ9NQG1 85 aa6.7□□□□□ -1.34
NANOG-201ENST00000229307 CBY1Q9Y3M2 126 aa6.7□□□□□ -1.34
NANOG-201ENST00000229307 DBX1A6NMT0 343 aa6.7□□□□□ -1.34
NANOG-201ENST00000229307 RD3LP0DJH9 198 aa6.7□□□□□ -1.34
NANOG-201ENST00000229307 SAMD13Q5VXD3 122 aa6.7□□□□□ -1.34
NANOG-201ENST00000229307 HCP5Q6MZN7 132 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms