RNA–Protein interactions for RNA: ENST00000229239.9

GAPDH-201, Transcript of glyceraldehyde-3-phosphate dehydrogenase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GAPDH, Length 1,875 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Exosome, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPDH-201ENST00000229239 EDDM3BP56851 147 aa13.97□□□□□ -0.17
GAPDH-201ENST00000229239 RPP30P78346 268 aaKnown RBP13.97□□□□□ -0.17
GAPDH-201ENST00000229239 FLI1Q01543 452 aaPredicted RBP13.97□□□□□ -0.17
GAPDH-201ENST00000229239 OR2B11Q5JQS5 317 aa13.97□□□□□ -0.17
GAPDH-201ENST00000229239 C22orf34Q6ZV56 151 aa13.97□□□□□ -0.17
GAPDH-201ENST00000229239 CENPVQ7Z7K6 275 aaPredicted RBP13.97□□□□□ -0.17
GAPDH-201ENST00000229239 ADTRPQ96IZ2 230 aa13.97□□□□□ -0.17
GAPDH-201ENST00000229239 WDR61Q9GZS3 305 aaKnown RBP13.97□□□□□ -0.17
GAPDH-201ENST00000229239 UTP20O75691 2785 aaKnown RBP13.97□□□□□ -0.17
GAPDH-201ENST00000229239 PRR14LQ5THK1 2151 aa13.96□□□□□ -0.17
GAPDH-201ENST00000229239 SPTBN1Q01082 2364 aaKnown RBP13.96□□□□□ -0.17
GAPDH-201ENST00000229239 KBTBD11-OT1A0A1B0GTJ5 212 aa13.96□□□□□ -0.17
GAPDH-201ENST00000229239 MARCH11A6NNE9 402 aa13.96□□□□□ -0.17
GAPDH-201ENST00000229239 DEFB108AA8MXU0 73 aa13.96□□□□□ -0.17
GAPDH-201ENST00000229239 SLC38A11Q08AI6 406 aa13.96□□□□□ -0.17
GAPDH-201ENST00000229239 RHEBQ15382 184 aa13.96□□□□□ -0.17
GAPDH-201ENST00000229239 HAPLN4Q86UW8 402 aa13.96□□□□□ -0.17
GAPDH-201ENST00000229239 OR10G4Q8NGN3 311 aa13.96□□□□□ -0.17
GAPDH-201ENST00000229239 OR52E5Q8NH55 327 aa13.96□□□□□ -0.17
GAPDH-201ENST00000229239 DTD1Q8TEA8 209 aa13.96□□□□□ -0.17
GAPDH-201ENST00000229239 MBD3L1Q8WWY6 194 aa13.96□□□□□ -0.17
GAPDH-201ENST00000229239 CORO2AQ92828 525 aa13.96□□□□□ -0.17
GAPDH-201ENST00000229239 CLN8Q9UBY8 286 aa13.96□□□□□ -0.17
GAPDH-201ENST00000229239 ZNF729A6NN14 1252 aaPredicted RBP13.95□□□□□ -0.18
GAPDH-201ENST00000229239 F12P00748 615 aaPredicted RBP13.95□□□□□ -0.18
GAPDH-201ENST00000229239 MBP02144 154 aa13.95□□□□□ -0.18
GAPDH-201ENST00000229239 ERVK-16P61578 105 aa13.95□□□□□ -0.18
GAPDH-201ENST00000229239 ARL16Q0P5N6 197 aa13.95□□□□□ -0.18
GAPDH-201ENST00000229239 PMS2P11Q13670 270 aa13.95□□□□□ -0.18
GAPDH-201ENST00000229239 KHDC3LQ587J8 217 aa13.95□□□□□ -0.18
GAPDH-201ENST00000229239 SOHLH1Q5JUK2 328 aa13.95□□□□□ -0.18
GAPDH-201ENST00000229239 ZNF506Q5JVG8 444 aa13.95□□□□□ -0.18
GAPDH-201ENST00000229239 ZNF788Q6ZQV5 615 aa13.95□□□□□ -0.18
GAPDH-201ENST00000229239 SFT2D1Q8WV19 159 aa13.95□□□□□ -0.18
GAPDH-201ENST00000229239 R3HDM4Q96D70 268 aa13.95□□□□□ -0.18
GAPDH-201ENST00000229239 CLCC1Q96S66 551 aa13.95□□□□□ -0.18
GAPDH-201ENST00000229239 TMEM147Q9BVK8 224 aa13.95□□□□□ -0.18
GAPDH-201ENST00000229239 IFI27L2Q9H2X8 130 aa13.95□□□□□ -0.18
GAPDH-201ENST00000229239 GFOD1Q9NXC2 390 aa13.95□□□□□ -0.18
GAPDH-201ENST00000229239 FBXO7Q9Y3I1 522 aa13.95□□□□□ -0.18
GAPDH-201ENST00000229239 POLEQ07864 2286 aa13.95□□□□□ -0.18
GAPDH-201ENST00000229239 CACNA1DQ01668 2161 aa13.95□□□□□ -0.18
GAPDH-201ENST00000229239 DPRXA6NFQ7 191 aa13.95□□□□□ -0.18
GAPDH-201ENST00000229239 GNB2P62879 340 aa13.95□□□□□ -0.18
GAPDH-201ENST00000229239 C17orf58Q2M2W7 97 aa13.95□□□□□ -0.18
GAPDH-201ENST00000229239 PDLIM3Q53GG5 364 aaPredicted RBP13.95□□□□□ -0.18
GAPDH-201ENST00000229239 NCR3LG1Q68D85 454 aa13.95□□□□□ -0.18
GAPDH-201ENST00000229239 TMEM88Q6PEY1 159 aa13.95□□□□□ -0.18
GAPDH-201ENST00000229239 WFDC8Q8IUA0 241 aa13.95□□□□□ -0.18
GAPDH-201ENST00000229239 C15orf54Q8N8G6 183 aa13.95□□□□□ -0.18
GAPDH-201ENST00000229239 OR10P1Q8NGE3 313 aa13.95□□□□□ -0.18
GAPDH-201ENST00000229239 OR10A7Q8NGE5 316 aa13.95□□□□□ -0.18
GAPDH-201ENST00000229239 TAF15Q92804 592 aaKnown RBP eCLIP13.95□□□□□ -0.18
GAPDH-201ENST00000229239 GAFA1Q96PS6 74 aa13.95□□□□□ -0.18
GAPDH-201ENST00000229239 ABHD14AQ9BUJ0 271 aa13.95□□□□□ -0.18
GAPDH-201ENST00000229239 EGLN1Q9GZT9 426 aa13.95□□□□□ -0.18
GAPDH-201ENST00000229239 ICE1Q9Y2F5 2266 aa13.94□□□□□ -0.18
GAPDH-201ENST00000229239 C17orf100A8MU93 164 aa13.94□□□□□ -0.18
GAPDH-201ENST00000229239 ADIPOQQ15848 244 aa13.94□□□□□ -0.18
GAPDH-201ENST00000229239 LTC4SQ16873 150 aa13.94□□□□□ -0.18
GAPDH-201ENST00000229239 HFEQ30201 348 aa13.94□□□□□ -0.18
GAPDH-201ENST00000229239 TMEM41BQ5BJD5 291 aa13.94□□□□□ -0.18
GAPDH-201ENST00000229239 C1orf87Q8N0U7 546 aa13.94□□□□□ -0.18
GAPDH-201ENST00000229239 OR4C12Q96R67 309 aa13.94□□□□□ -0.18
GAPDH-201ENST00000229239 S1PR3Q99500 378 aa13.94□□□□□ -0.18
GAPDH-201ENST00000229239 RFNGQ9Y644 331 aa13.94□□□□□ -0.18
GAPDH-201ENST00000229239 ZGRF1Q86YA3 2104 aa13.94□□□□□ -0.18
GAPDH-201ENST00000229239 NKX6-3A6NJ46 265 aa13.93□□□□□ -0.18
GAPDH-201ENST00000229239 M0R1X1 148 aa13.93□□□□□ -0.18
GAPDH-201ENST00000229239 GPR37O15354 613 aa13.93□□□□□ -0.18
GAPDH-201ENST00000229239 PROP1O75360 226 aa13.93□□□□□ -0.18
GAPDH-201ENST00000229239 RBMXL2O75526 392 aaKnown RBP13.93□□□□□ -0.18
GAPDH-201ENST00000229239 THBDP07204 575 aa13.93□□□□□ -0.18
GAPDH-201ENST00000229239 NQO2P16083 231 aa13.93□□□□□ -0.18
GAPDH-201ENST00000229239 SPCS3P61009 180 aa13.93□□□□□ -0.18
GAPDH-201ENST00000229239 CBLN2Q8IUK8 224 aa13.93□□□□□ -0.18
GAPDH-201ENST00000229239 OR4S2Q8NH73 311 aa13.93□□□□□ -0.18
GAPDH-201ENST00000229239 TRAV38-1A0A0B4J264 116 aa13.93□□□□□ -0.18
GAPDH-201ENST00000229239 CYB5R3P00387 301 aaPredicted RBP13.93□□□□□ -0.18
GAPDH-201ENST00000229239 OR4A8P0C604 315 aa13.93□□□□□ -0.18
GAPDH-201ENST00000229239 TAGLN2P37802 199 aaKnown RBP13.93□□□□□ -0.18
GAPDH-201ENST00000229239 THBS3P49746 956 aa13.93□□□□□ -0.18
GAPDH-201ENST00000229239 BSPH1Q075Z2 132 aa13.93□□□□□ -0.18
GAPDH-201ENST00000229239 VWC2Q2TAL6 325 aa13.93□□□□□ -0.18
GAPDH-201ENST00000229239 RND1Q92730 232 aa13.93□□□□□ -0.18
GAPDH-201ENST00000229239 VKORC1Q9BQB6 163 aa13.93□□□□□ -0.18
GAPDH-201ENST00000229239 hADV38S2A0JD32 116 aa13.92□□□□□ -0.18
GAPDH-201ENST00000229239 CEBPZOSA8MTT3 80 aa13.92□□□□□ -0.18
GAPDH-201ENST00000229239 FCGR3BO75015 233 aa13.92□□□□□ -0.18
GAPDH-201ENST00000229239 NDUFS6O75380 124 aaKnown RBP13.92□□□□□ -0.18
GAPDH-201ENST00000229239 CCL20P78556 96 aa13.92□□□□□ -0.18
GAPDH-201ENST00000229239 MEF2CQ06413 473 aaPredicted RBP13.92□□□□□ -0.18
GAPDH-201ENST00000229239 OR4A16Q8NH70 328 aa13.92□□□□□ -0.18
GAPDH-201ENST00000229239 CLDND2Q8NHS1 167 aa13.92□□□□□ -0.18
GAPDH-201ENST00000229239 ZNF251Q9BRH9 671 aa13.92□□□□□ -0.18
GAPDH-201ENST00000229239 RSG1Q9BU20 258 aa13.92□□□□□ -0.18
GAPDH-201ENST00000229239 RPRMQ9NS64 109 aa13.92□□□□□ -0.18
GAPDH-201ENST00000229239 IDI2-AS1Q9NZ38 188 aa13.92□□□□□ -0.18
GAPDH-201ENST00000229239 USF3Q68DE3 2245 aa13.92□□□□□ -0.18
GAPDH-201ENST00000229239 MAST4O15021 2626 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms