RNA–Protein interactions for RNA: ENST00000220959.8

UBR5-201, Transcript of ubiquitin protein ligase E3 component n-recognin 5, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBR5, Length 9,418 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR5-201ENST00000220959 KLK13Q9UKR3 277 aa12.82□□□□□ -0.36
UBR5-201ENST00000220959 OR51G1Q8NGK1 321 aa12.82□□□□□ -0.36
UBR5-201ENST00000220959 NRTNQ99748 197 aa12.82□□□□□ -0.36
UBR5-201ENST00000220959 LOXL4Q96JB6 756 aa12.82□□□□□ -0.36
UBR5-201ENST00000220959 AMY1AP04745 511 aa12.81□□□□□ -0.36
UBR5-201ENST00000220959 ZNF826PQ6ZT77 177 aa12.81□□□□□ -0.36
UBR5-201ENST00000220959 QTRT1Q9BXR0 403 aaKnown RBP12.81□□□□□ -0.36
UBR5-201ENST00000220959 IGHV3OR16-10A0A075B7F0 116 aa12.81□□□□□ -0.36
UBR5-201ENST00000220959 OR51M1Q9H341 326 aa12.81□□□□□ -0.36
UBR5-201ENST00000220959 SOX21Q9Y651 276 aaPredicted RBP12.81□□□□□ -0.36
UBR5-201ENST00000220959 PKD1L3Q7Z443 1732 aa12.81□□□□□ -0.36
UBR5-201ENST00000220959 TMEM45BQ96B21 275 aa12.81□□□□□ -0.36
UBR5-201ENST00000220959 PKIBQ9C010 78 aa12.81□□□□□ -0.36
UBR5-201ENST00000220959 DDA1Q9BW61 102 aa12.81□□□□□ -0.36
UBR5-201ENST00000220959 MRPL18Q9H0U6 180 aaKnown RBP12.81□□□□□ -0.36
UBR5-201ENST00000220959 SPINT1O43278 529 aa12.81□□□□□ -0.36
UBR5-201ENST00000220959 RHOVQ96L33 236 aa12.81□□□□□ -0.36
UBR5-201ENST00000220959 TNFRSF18Q9Y5U5 241 aa12.81□□□□□ -0.36
UBR5-201ENST00000220959 CYB561D1Q8N8Q1 229 aa12.81□□□□□ -0.36
UBR5-201ENST00000220959 C9JCJ5 164 aa12.8□□□□□ -0.36
UBR5-201ENST00000220959 MEGF10Q96KG7 1140 aa12.8□□□□□ -0.36
UBR5-201ENST00000220959 YLPM1P49750 1951 aaKnown RBP12.8□□□□□ -0.36
UBR5-201ENST00000220959 PRR19A6NJB7 356 aa12.8□□□□□ -0.36
UBR5-201ENST00000220959 GFRA3O60609 400 aa12.8□□□□□ -0.36
UBR5-201ENST00000220959 CEACAM4O75871 244 aa12.8□□□□□ -0.36
UBR5-201ENST00000220959 HLA-DQA1P01909 254 aa12.8□□□□□ -0.36
UBR5-201ENST00000220959 HOXB1P14653 301 aaPredicted RBP12.8□□□□□ -0.36
UBR5-201ENST00000220959 DNASE2BQ8WZ79 361 aa12.8□□□□□ -0.36
UBR5-201ENST00000220959 TXNDC17Q9BRA2 123 aa12.8□□□□□ -0.36
UBR5-201ENST00000220959 RUNX1Q01196 453 aa12.8□□□□□ -0.36
UBR5-201ENST00000220959 OR4D5Q8NGN0 318 aa12.8□□□□□ -0.36
UBR5-201ENST00000220959 HEATR5AQ86XA9 2040 aa12.8□□□□□ -0.36
UBR5-201ENST00000220959 A0A1W2PPV9 198 aa12.8□□□□□ -0.36
UBR5-201ENST00000220959 F11RQ9Y624 299 aaKnown RBP12.8□□□□□ -0.36
UBR5-201ENST00000220959 WNK2Q9Y3S1 2297 aa12.8□□□□□ -0.36
UBR5-201ENST00000220959 C8orf88P0DMB2 117 aa12.8□□□□□ -0.36
UBR5-201ENST00000220959 NRIP2Q9BQI9 281 aa12.8□□□□□ -0.36
UBR5-201ENST00000220959 ODAMA1E959 279 aa12.8□□□□□ -0.36
UBR5-201ENST00000220959 FOLR2P14207 255 aa12.8□□□□□ -0.36
UBR5-201ENST00000220959 IL11P20809 199 aa12.8□□□□□ -0.36
UBR5-201ENST00000220959 ZNF501Q96CX3 271 aaPredicted RBP12.8□□□□□ -0.36
UBR5-201ENST00000220959 EFNB2P52799 333 aa12.8□□□□□ -0.36
UBR5-201ENST00000220959 FGFRL1Q8N441 504 aa12.8□□□□□ -0.36
UBR5-201ENST00000220959 BEND2Q8NDZ0 799 aa12.8□□□□□ -0.36
UBR5-201ENST00000220959 C5orf67F2Z3F1 127 aa12.79□□□□□ -0.36
UBR5-201ENST00000220959 MDKP21741 143 aaPredicted RBP12.79□□□□□ -0.36
UBR5-201ENST00000220959 HIST1H1AQ02539 215 aaPredicted RBP12.79□□□□□ -0.36
UBR5-201ENST00000220959 TLNRD1Q9H1K6 362 aa12.79□□□□□ -0.36
UBR5-201ENST00000220959 NRXN3Q9Y4C0 1643 aa12.79□□□□□ -0.36
UBR5-201ENST00000220959 IGHV1-69-2A0A0G2JMI3 117 aa12.79□□□□□ -0.36
UBR5-201ENST00000220959 NPIPB11E5RHQ5 1161 aa12.79□□□□□ -0.36
UBR5-201ENST00000220959 FXYD3Q14802 87 aa12.79□□□□□ -0.36
UBR5-201ENST00000220959 CLEC7AQ9BXN2 247 aa12.79□□□□□ -0.36
UBR5-201ENST00000220959 UNC119Q13432 240 aa12.79□□□□□ -0.36
UBR5-201ENST00000220959 V9GYH0 126 aa12.79□□□□□ -0.36
UBR5-201ENST00000220959 FAM209AQ5JX71 171 aa12.79□□□□□ -0.36
UBR5-201ENST00000220959 MIC13Q5XKP0 118 aa12.79□□□□□ -0.36
UBR5-201ENST00000220959 TAF15Q92804 592 aaKnown RBP eCLIP12.79□□□□□ -0.363e-6■■■■□ 20.4
UBR5-201ENST00000220959 LINC00470Q9BZP3 86 aa12.79□□□□□ -0.36
UBR5-201ENST00000220959 DSPPQ9NZW4 1301 aa12.79□□□□□ -0.36
UBR5-201ENST00000220959 C1QAP02745 245 aa12.79□□□□□ -0.36
UBR5-201ENST00000220959 HSPE1P61604 102 aaKnown RBP12.79□□□□□ -0.36
UBR5-201ENST00000220959 CELA2AP08217 269 aa12.79□□□□□ -0.36
UBR5-201ENST00000220959 VAX1Q5SQQ9 334 aa12.79□□□□□ -0.36
UBR5-201ENST00000220959 C1orf53Q5VUE5 145 aa12.79□□□□□ -0.36
UBR5-201ENST00000220959 FOXC2Q99958 501 aa12.79□□□□□ -0.36
UBR5-201ENST00000220959 TRGV3P03979 118 aa12.78□□□□□ -0.36
UBR5-201ENST00000220959 TMEM170BQ5T4T1 132 aa12.78□□□□□ -0.36
UBR5-201ENST00000220959 ITLN2Q8WWU7 325 aaPredicted RBP12.78□□□□□ -0.36
UBR5-201ENST00000220959 KCNK7Q9Y2U2 307 aa12.78□□□□□ -0.36
UBR5-201ENST00000220959 H7C1H1 209 aa12.78□□□□□ -0.36
UBR5-201ENST00000220959 FOXS1O43638 330 aa12.78□□□□□ -0.36
UBR5-201ENST00000220959 TMEM252Q8N6L7 170 aa12.78□□□□□ -0.36
UBR5-201ENST00000220959 JKAMPQ9P055 326 aa12.78□□□□□ -0.36
UBR5-201ENST00000220959 TRBV20OR9-2A0A075B6H5 130 aa12.78□□□□□ -0.36
UBR5-201ENST00000220959 ZNHIT1O43257 154 aa12.78□□□□□ -0.36
UBR5-201ENST00000220959 HLA-DRB1P01911 266 aa12.78□□□□□ -0.36
UBR5-201ENST00000220959 ZNF345Q14585 488 aa12.78□□□□□ -0.36
UBR5-201ENST00000220959 BHLHA9Q7RTU4 235 aa12.78□□□□□ -0.36
UBR5-201ENST00000220959 POLR2AP24928 1970 aaKnown RBP12.78□□□□□ -0.36
UBR5-201ENST00000220959 SYNGR3O43761 229 aa12.78□□□□□ -0.36
UBR5-201ENST00000220959 PTP4A3O75365 173 aa12.78□□□□□ -0.36
UBR5-201ENST00000220959 ARL14EPLP0DKL9 152 aa12.78□□□□□ -0.36
UBR5-201ENST00000220959 KCNK17Q96T54 332 aa12.78□□□□□ -0.36
UBR5-201ENST00000220959 TUBD1Q9UJT1 453 aa12.78□□□□□ -0.36
UBR5-201ENST00000220959 RECKO95980 971 aa12.78□□□□□ -0.36
UBR5-201ENST00000220959 OR9G1Q8NH87 305 aa12.78□□□□□ -0.36
UBR5-201ENST00000220959 HTN3P15516 51 aa12.78□□□□□ -0.36
UBR5-201ENST00000220959 STARD6P59095 220 aa12.78□□□□□ -0.36
UBR5-201ENST00000220959 C9orf62Q8N4C0 152 aa12.78□□□□□ -0.36
UBR5-201ENST00000220959 TMEM186Q96B77 213 aa12.78□□□□□ -0.36
UBR5-201ENST00000220959 MIXL1Q9H2W2 232 aa12.78□□□□□ -0.36
UBR5-201ENST00000220959 IL4P05112 153 aa12.78□□□□□ -0.36
UBR5-201ENST00000220959 SPSB4Q96A44 273 aa12.78□□□□□ -0.36
UBR5-201ENST00000220959 TRAF4Q9BUZ4 470 aaPredicted RBP12.78□□□□□ -0.36
UBR5-201ENST00000220959 C11orf68Q9H3H3 251 aaKnown RBP12.78□□□□□ -0.36
UBR5-201ENST00000220959 RREB1Q92766 1687 aa12.77□□□□□ -0.36
UBR5-201ENST00000220959 ARFGEF3Q5TH69 2177 aa12.77□□□□□ -0.36
UBR5-201ENST00000220959 USP54Q70EL1 1684 aa12.77□□□□□ -0.36
UBR5-201ENST00000220959 CD1AP06126 327 aa12.77□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms