RNA–Protein interactions for RNA: ENST00000218388.8

TIMP1-201, Transcript of TIMP metallopeptidase inhibitor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TIMP1, Length 892 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1-201ENST00000218388 SGPP2Q8IWX5 399 aa10.56□□□□□ -0.72
TIMP1-201ENST00000218388 SPAG16Q8N0X2 631 aa10.56□□□□□ -0.72
TIMP1-201ENST00000218388 CENPSQ8N2Z9 138 aa10.56□□□□□ -0.72
TIMP1-201ENST00000218388 PIFOQ8TCI5 191 aa10.56□□□□□ -0.72
TIMP1-201ENST00000218388 EAF1Q96JC9 268 aaPredicted RBP10.56□□□□□ -0.72
TIMP1-201ENST00000218388 GPHA2Q96T91 129 aa10.56□□□□□ -0.72
TIMP1-201ENST00000218388 TSNAXQ99598 290 aaKnown RBP10.56□□□□□ -0.72
TIMP1-201ENST00000218388 AIFM2Q9BRQ8 373 aa10.56□□□□□ -0.72
TIMP1-201ENST00000218388 RTBDNQ9BSG5 229 aaPredicted RBP10.56□□□□□ -0.72
TIMP1-201ENST00000218388 TNFRSF19Q9NS68 423 aa10.56□□□□□ -0.72
TIMP1-201ENST00000218388 FAM212BQ9NTI7 297 aaPredicted RBP10.56□□□□□ -0.72
TIMP1-201ENST00000218388 KCNIP3Q9Y2W7 256 aa10.56□□□□□ -0.72
TIMP1-201ENST00000218388 H0Y980 276 aa10.55□□□□□ -0.72
TIMP1-201ENST00000218388 TRIM77I1YAP6 450 aa10.55□□□□□ -0.72
TIMP1-201ENST00000218388 M0QZK8 103 aa10.55□□□□□ -0.72
TIMP1-201ENST00000218388 SHOXO15266 292 aa10.55□□□□□ -0.72
TIMP1-201ENST00000218388 CRYZL1O95825 349 aa10.55□□□□□ -0.72
TIMP1-201ENST00000218388 TCRBP04435 133 aa10.55□□□□□ -0.72
TIMP1-201ENST00000218388 ANXA3P12429 323 aa10.55□□□□□ -0.72
TIMP1-201ENST00000218388 LGALS7P47929 136 aa10.55□□□□□ -0.72
TIMP1-201ENST00000218388 LINC00205P59089 165 aa10.55□□□□□ -0.72
TIMP1-201ENST00000218388 UBE2MP61081 183 aaKnown RBP10.55□□□□□ -0.72
TIMP1-201ENST00000218388 RPL15P61313 204 aaKnown RBP10.55□□□□□ -0.72
TIMP1-201ENST00000218388 RPS16P62249 146 aaKnown RBP10.55□□□□□ -0.72
TIMP1-201ENST00000218388 HNF4GQ14541 408 aa10.55□□□□□ -0.72
TIMP1-201ENST00000218388 TMEM177Q53S58 311 aa10.55□□□□□ -0.72
TIMP1-201ENST00000218388 OSR1Q8TAX0 266 aaPredicted RBP10.55□□□□□ -0.72
TIMP1-201ENST00000218388 HARBI1Q96MB7 349 aa10.55□□□□□ -0.72
TIMP1-201ENST00000218388 RBM14Q96PK6 669 aaKnown RBP10.55□□□□□ -0.72
TIMP1-201ENST00000218388 SLC25A33Q9BSK2 321 aa10.55□□□□□ -0.72
TIMP1-201ENST00000218388 C20orf85Q9H1P6 137 aa10.55□□□□□ -0.72
TIMP1-201ENST00000218388 NAA60Q9H7X0 242 aa10.55□□□□□ -0.72
TIMP1-201ENST00000218388 KIAA1456Q9P272 454 aa10.55□□□□□ -0.72
TIMP1-201ENST00000218388 MOB4Q9Y3A3 225 aa10.55□□□□□ -0.72
TIMP1-201ENST00000218388 NUBP2Q9Y5Y2 271 aa10.55□□□□□ -0.72
TIMP1-201ENST00000218388 MXRA5Q9NR99 2828 aa10.55□□□□□ -0.72
TIMP1-201ENST00000218388 PIGBOS1A0A0B4J2F0 54 aa10.54□□□□□ -0.72
TIMP1-201ENST00000218388 C3orf85A0A1B0GTC6 90 aa10.54□□□□□ -0.72
TIMP1-201ENST00000218388 CRYM-AS1A6NIL9 109 aa10.54□□□□□ -0.72
TIMP1-201ENST00000218388 ARPC1BO15143 372 aaKnown RBP10.54□□□□□ -0.72
TIMP1-201ENST00000218388 SPDEFO95238 335 aa10.54□□□□□ -0.72
TIMP1-201ENST00000218388 HPRT1P00492 218 aa10.54□□□□□ -0.72
TIMP1-201ENST00000218388 IGKV1-16P04430 117 aa10.54□□□□□ -0.72
TIMP1-201ENST00000218388 SERPINE2P07093 398 aa10.54□□□□□ -0.72
TIMP1-201ENST00000218388 RNASE1P07998 156 aaKnown RBP10.54□□□□□ -0.72
TIMP1-201ENST00000218388 AKR1C4P17516 323 aa10.54□□□□□ -0.72
TIMP1-201ENST00000218388 UBA52P62987 128 aaKnown RBP10.54□□□□□ -0.72
TIMP1-201ENST00000218388 MMDQ15546 238 aa10.54□□□□□ -0.72
TIMP1-201ENST00000218388 TMEM128Q5BJH2 165 aa10.54□□□□□ -0.72
TIMP1-201ENST00000218388 PLET1Q6UQ28 207 aa10.54□□□□□ -0.72
TIMP1-201ENST00000218388 TMEM219Q86XT9 240 aa10.54□□□□□ -0.72
TIMP1-201ENST00000218388 Q8N6K4 173 aa10.54□□□□□ -0.72
TIMP1-201ENST00000218388 DUX5Q96PT3 197 aa10.54□□□□□ -0.72
TIMP1-201ENST00000218388 CHIAQ9BZP6 476 aa10.54□□□□□ -0.72
TIMP1-201ENST00000218388 ESM1Q9NQ30 184 aa10.54□□□□□ -0.72
TIMP1-201ENST00000218388 NUDT15Q9NV35 164 aa10.54□□□□□ -0.72
TIMP1-201ENST00000218388 COMMD9Q9P000 198 aa10.54□□□□□ -0.72
TIMP1-201ENST00000218388 NCBP2LA6PVI3 153 aaKnown RBP10.53□□□□□ -0.72
TIMP1-201ENST00000218388 NBR2O15453 112 aa10.53□□□□□ -0.72
TIMP1-201ENST00000218388 FGF16O43320 207 aa10.53□□□□□ -0.72
TIMP1-201ENST00000218388 GPR137BO60478 399 aa10.53□□□□□ -0.72
TIMP1-201ENST00000218388 ATG12O94817 140 aa10.53□□□□□ -0.72
TIMP1-201ENST00000218388 PTTG1O95997 202 aa10.53□□□□□ -0.72
TIMP1-201ENST00000218388 HRASP01112 189 aa10.53□□□□□ -0.72
TIMP1-201ENST00000218388 CRYBA1P05813 215 aa10.53□□□□□ -0.72
TIMP1-201ENST00000218388 RPA2P15927 270 aa10.53□□□□□ -0.72
TIMP1-201ENST00000218388 DHODHQ02127 395 aa10.53□□□□□ -0.72
TIMP1-201ENST00000218388 VMA21Q3ZAQ7 101 aa10.53□□□□□ -0.72
TIMP1-201ENST00000218388 CCBE1Q6UXH8 406 aaPredicted RBP10.53□□□□□ -0.72
TIMP1-201ENST00000218388 NRARPQ7Z6K4 114 aa10.53□□□□□ -0.72
TIMP1-201ENST00000218388 SLC25A42Q86VD7 318 aa10.53□□□□□ -0.72
TIMP1-201ENST00000218388 LURAP1LQ8IV03 231 aa10.53□□□□□ -0.72
TIMP1-201ENST00000218388 ADAD2Q8NCV1 583 aaKnown RBP10.53□□□□□ -0.72
TIMP1-201ENST00000218388 DUSP18Q8NEJ0 188 aa10.53□□□□□ -0.72
TIMP1-201ENST00000218388 PLEKHA2Q9HB19 425 aa10.53□□□□□ -0.72
TIMP1-201ENST00000218388 RAMP3O60896 148 aa10.52□□□□□ -0.73
TIMP1-201ENST00000218388 PEX14O75381 377 aa10.52□□□□□ -0.73
TIMP1-201ENST00000218388 H2AFB2P0C5Z0 115 aa10.52□□□□□ -0.73
TIMP1-201ENST00000218388 NQO2P16083 231 aa10.52□□□□□ -0.73
TIMP1-201ENST00000218388 VAMP1P23763 118 aa10.52□□□□□ -0.73
TIMP1-201ENST00000218388 ERVK-16P61578 105 aa10.52□□□□□ -0.73
TIMP1-201ENST00000218388 SRPXP78539 464 aa10.52□□□□□ -0.73
TIMP1-201ENST00000218388 PLGLAQ15195 96 aa10.52□□□□□ -0.73
TIMP1-201ENST00000218388 TRIM16LQ309B1 348 aa10.52□□□□□ -0.73
TIMP1-201ENST00000218388 NPBQ8NG41 125 aa10.52□□□□□ -0.73
TIMP1-201ENST00000218388 VSTM2AQ8TAG5 236 aa10.52□□□□□ -0.73
TIMP1-201ENST00000218388 TMEM230Q96A57 120 aa10.52□□□□□ -0.73
TIMP1-201ENST00000218388 GALNT14Q96FL9 552 aa10.52□□□□□ -0.73
TIMP1-201ENST00000218388 NPFFR1Q9GZQ6 430 aa10.52□□□□□ -0.73
TIMP1-201ENST00000218388 FLVCR2Q9UPI3 526 aa10.52□□□□□ -0.73
TIMP1-201ENST00000218388 TRAV6A0A075B6T7 132 aa10.51□□□□□ -0.73
TIMP1-201ENST00000218388 RRHO14718 337 aa10.51□□□□□ -0.73
TIMP1-201ENST00000218388 CREBL2O60519 120 aaPredicted RBP10.51□□□□□ -0.73
TIMP1-201ENST00000218388 S1PR2O95136 353 aa10.51□□□□□ -0.73
TIMP1-201ENST00000218388 NDUFA3O95167 84 aa10.51□□□□□ -0.73
TIMP1-201ENST00000218388 OR5AC1P0C628 307 aa10.51□□□□□ -0.73
TIMP1-201ENST00000218388 UCP1P25874 307 aa10.51□□□□□ -0.73
TIMP1-201ENST00000218388 LPAR6P43657 344 aa10.51□□□□□ -0.73
TIMP1-201ENST00000218388 BRWD1-AS2P59051 145 aa10.51□□□□□ -0.73
TIMP1-201ENST00000218388 RGS21Q2M5E4 152 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms