RNA–Protein interactions for RNA: ENST00000217402.2

CHMP4B-201, Transcript of charged multivesicular body protein 4B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP4B, Length 1,646 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4B-201ENST00000217402 BEX1Q9HBH7 125 aa21.82■■□□□ 1.08
CHMP4B-201ENST00000217402 NUBP2Q9Y5Y2 271 aa21.82■■□□□ 1.08
CHMP4B-201ENST00000217402 CUBNO60494 3623 aa21.81■■□□□ 1.08
CHMP4B-201ENST00000217402 C3orf85A0A1B0GTC6 90 aa21.81■■□□□ 1.08
CHMP4B-201ENST00000217402 RRASP10301 218 aa21.81■■□□□ 1.08
CHMP4B-201ENST00000217402 SPNP16150 400 aa21.81■■□□□ 1.08
CHMP4B-201ENST00000217402 KIR2DS2P43631 304 aa21.81■■□□□ 1.08
CHMP4B-201ENST00000217402 RAB25P57735 213 aa21.81■■□□□ 1.08
CHMP4B-201ENST00000217402 SLC9A3R2Q15599 337 aa21.81■■□□□ 1.08
CHMP4B-201ENST00000217402 SP6Q3SY56 376 aa21.81■■□□□ 1.08
CHMP4B-201ENST00000217402 CCBE1Q6UXH8 406 aaPredicted RBP21.81■■□□□ 1.08
CHMP4B-201ENST00000217402 SGPP2Q8IWX5 399 aa21.81■■□□□ 1.08
CHMP4B-201ENST00000217402 OR4S2Q8NH73 311 aa21.81■■□□□ 1.08
CHMP4B-201ENST00000217402 FLYWCH2Q96CP2 140 aaKnown RBP21.81■■□□□ 1.08
CHMP4B-201ENST00000217402 TP53RKQ96S44 253 aa21.81■■□□□ 1.08
CHMP4B-201ENST00000217402 VPREB3Q9UKI3 123 aa21.81■■□□□ 1.08
CHMP4B-201ENST00000217402 PTTG1O95997 202 aa21.8■■□□□ 1.08
CHMP4B-201ENST00000217402 EBI3Q14213 229 aa21.8■■□□□ 1.08
CHMP4B-201ENST00000217402 DUSP18Q8NEJ0 188 aa21.8■■□□□ 1.08
CHMP4B-201ENST00000217402 CHIAQ9BZP6 476 aa21.8■■□□□ 1.08
CHMP4B-201ENST00000217402 POMT1Q9Y6A1 747 aa21.8■■□□□ 1.08
CHMP4B-201ENST00000217402 A6NDX4 124 aa21.8■■□□□ 1.08
CHMP4B-201ENST00000217402 H2AFB2P0C5Z0 115 aa21.8■■□□□ 1.08
CHMP4B-201ENST00000217402 OR5AC1P0C628 307 aa21.8■■□□□ 1.08
CHMP4B-201ENST00000217402 TAS2R31P59538 309 aa21.8■■□□□ 1.08
CHMP4B-201ENST00000217402 HILS1P60008 231 aa21.8■■□□□ 1.08
CHMP4B-201ENST00000217402 RPS16P62249 146 aaKnown RBP21.8■■□□□ 1.08
CHMP4B-201ENST00000217402 RGS21Q2M5E4 152 aa21.8■■□□□ 1.08
CHMP4B-201ENST00000217402 PLET1Q6UQ28 207 aa21.8■■□□□ 1.08
CHMP4B-201ENST00000217402 SLC25A42Q86VD7 318 aa21.8■■□□□ 1.08
CHMP4B-201ENST00000217402 OR4C13Q8NGP0 309 aa21.8■■□□□ 1.08
CHMP4B-201ENST00000217402 H0Y980 276 aa21.79■■□□□ 1.08
CHMP4B-201ENST00000217402 VAMP1P23763 118 aa21.79■■□□□ 1.08
CHMP4B-201ENST00000217402 TMEM128Q5BJH2 165 aa21.79■■□□□ 1.08
CHMP4B-201ENST00000217402 DHRS7BQ6IAN0 325 aaPredicted RBP21.79■■□□□ 1.08
CHMP4B-201ENST00000217402 HARBI1Q96MB7 349 aa21.79■■□□□ 1.08
CHMP4B-201ENST00000217402 PITPNC1Q9UKF7 332 aa21.79■■□□□ 1.08
CHMP4B-201ENST00000217402 SHOXO15266 292 aa21.78■■□□□ 1.08
CHMP4B-201ENST00000217402 VSIG10L2P0DP72 767 aa21.78■■□□□ 1.08
CHMP4B-201ENST00000217402 CNTFRP26992 372 aa21.78■■□□□ 1.08
CHMP4B-201ENST00000217402 SUPT4H1P63272 117 aaKnown RBP21.78■■□□□ 1.08
CHMP4B-201ENST00000217402 PPP1R1AQ13522 171 aa21.78■■□□□ 1.08
CHMP4B-201ENST00000217402 TMEM86BQ8N661 226 aa21.78■■□□□ 1.08
CHMP4B-201ENST00000217402 Q8N6K4 173 aa21.78■■□□□ 1.08
CHMP4B-201ENST00000217402 CD300LFQ8TDQ1 290 aa21.78■■□□□ 1.08
CHMP4B-201ENST00000217402 SLC25A33Q9BSK2 321 aa21.78■■□□□ 1.08
CHMP4B-201ENST00000217402 RBFOX2O43251 390 aaKnown RBP eCLIP21.77■■□□□ 1.08
CHMP4B-201ENST00000217402 S1PR2O95136 353 aa21.77■■□□□ 1.08
CHMP4B-201ENST00000217402 LPAR6P43657 344 aa21.77■■□□□ 1.08
CHMP4B-201ENST00000217402 MMDQ15546 238 aa21.77■■□□□ 1.08
CHMP4B-201ENST00000217402 ZNF585BQ52M93 769 aa21.77■■□□□ 1.08
CHMP4B-201ENST00000217402 TMEM177Q53S58 311 aa21.77■■□□□ 1.08
CHMP4B-201ENST00000217402 PRR13Q9NZ81 148 aa21.77■■□□□ 1.08
CHMP4B-201ENST00000217402 NIPBLQ6KC79 2804 aaeCLIP21.77■■□□□ 1.081e-6■■■■□ 20.9
CHMP4B-201ENST00000217402 TCF21O43680 179 aa21.77■■□□□ 1.07
CHMP4B-201ENST00000217402 CHST1O43916 411 aa21.77■■□□□ 1.07
CHMP4B-201ENST00000217402 SERPINE2P07093 398 aa21.77■■□□□ 1.07
CHMP4B-201ENST00000217402 F2RL1P55085 397 aa21.77■■□□□ 1.07
CHMP4B-201ENST00000217402 C4orf46Q504U0 113 aa21.77■■□□□ 1.07
CHMP4B-201ENST00000217402 TCTEX1D1Q8N7M0 179 aa21.77■■□□□ 1.07
CHMP4B-201ENST00000217402 KCNIP3Q9Y2W7 256 aa21.77■■□□□ 1.07
CHMP4B-201ENST00000217402 NCBP2LA6PVI3 153 aaKnown RBP21.76■■□□□ 1.07
CHMP4B-201ENST00000217402 DHODHQ02127 395 aa21.76■■□□□ 1.07
CHMP4B-201ENST00000217402 TRIM16LQ309B1 348 aa21.76■■□□□ 1.07
CHMP4B-201ENST00000217402 RBM14Q96PK6 669 aaKnown RBP21.76■■□□□ 1.07
CHMP4B-201ENST00000217402 JMJD8Q96S16 334 aa21.76■■□□□ 1.07
CHMP4B-201ENST00000217402 OR2F2O95006 317 aa21.75■■□□□ 1.07
CHMP4B-201ENST00000217402 HPRT1P00492 218 aa21.75■■□□□ 1.07
CHMP4B-201ENST00000217402 OR4E1P0C645 316 aa21.75■■□□□ 1.07
CHMP4B-201ENST00000217402 C11orf88Q6PI97 169 aa21.75■■□□□ 1.07
CHMP4B-201ENST00000217402 VKORC1L1Q8N0U8 176 aa21.75■■□□□ 1.07
CHMP4B-201ENST00000217402 OSR1Q8TAX0 266 aaPredicted RBP21.75■■□□□ 1.07
CHMP4B-201ENST00000217402 TMEM222Q9H0R3 208 aa21.75■■□□□ 1.07
CHMP4B-201ENST00000217402 SRRM4A7MD48 611 aaKnown RBP21.74■■□□□ 1.07
CHMP4B-201ENST00000217402 IFNA2P01563 188 aa21.74■■□□□ 1.07
CHMP4B-201ENST00000217402 HLA-AP01891 365 aaKnown RBP21.74■■□□□ 1.07
CHMP4B-201ENST00000217402 UBE2MP61081 183 aaKnown RBP21.74■■□□□ 1.07
CHMP4B-201ENST00000217402 CASTOR1Q8WTX7 329 aa21.74■■□□□ 1.07
CHMP4B-201ENST00000217402 GLYATL2Q8WU03 294 aa21.74■■□□□ 1.07
CHMP4B-201ENST00000217402 GALNT14Q96FL9 552 aa21.74■■□□□ 1.07
CHMP4B-201ENST00000217402 NBR2O15453 112 aa21.73■■□□□ 1.07
CHMP4B-201ENST00000217402 B3GALNT1O75752 331 aa21.73■■□□□ 1.07
CHMP4B-201ENST00000217402 RPA2P15927 270 aa21.73■■□□□ 1.07
CHMP4B-201ENST00000217402 UCP1P25874 307 aa21.73■■□□□ 1.07
CHMP4B-201ENST00000217402 ZFAND2BQ8WV99 257 aa21.73■■□□□ 1.07
CHMP4B-201ENST00000217402 TSNAXQ99598 290 aaKnown RBP21.73■■□□□ 1.07
CHMP4B-201ENST00000217402 PLEKHA2Q9HB19 425 aa21.73■■□□□ 1.07
CHMP4B-201ENST00000217402 FAM212BQ9NTI7 297 aaPredicted RBP21.73■■□□□ 1.07
CHMP4B-201ENST00000217402 MOB4Q9Y3A3 225 aa21.73■■□□□ 1.07
CHMP4B-201ENST00000217402 INMT-MINDY4F8WBC2 141 aa21.73■■□□□ 1.07
CHMP4B-201ENST00000217402 CLDN34H7C241 214 aa21.73■■□□□ 1.07
CHMP4B-201ENST00000217402 GPR137BO60478 399 aa21.73■■□□□ 1.07
CHMP4B-201ENST00000217402 SFT2D2O95562 160 aa21.73■■□□□ 1.07
CHMP4B-201ENST00000217402 IGLV2-23P01705 113 aa21.73■■□□□ 1.07
CHMP4B-201ENST00000217402 ANXA3P12429 323 aa21.73■■□□□ 1.07
CHMP4B-201ENST00000217402 UBA52P62987 128 aaKnown RBP21.73■■□□□ 1.07
CHMP4B-201ENST00000217402 SRSF2Q01130 221 aaKnown RBP21.73■■□□□ 1.07
CHMP4B-201ENST00000217402 LIAT1Q6ZQX7 453 aa21.73■■□□□ 1.07
CHMP4B-201ENST00000217402 SSX9Q7RTT3 188 aa21.73■■□□□ 1.07
CHMP4B-201ENST00000217402 OR52B4Q8NGK2 314 aa21.73■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms