RNA–Protein interactions for RNA: ENST00000217133.1

TUBB1-201, Transcript of tubulin beta 1 class VI, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBB1, Length 3,496 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB1-201ENST00000217133 ZNF292O60281 2723 aa8.16□□□□□ -1.1
TUBB1-201ENST00000217133 LNP1A1A4G5 178 aa8.15□□□□□ -1.1
TUBB1-201ENST00000217133 MLNRO43193 412 aa8.15□□□□□ -1.1
TUBB1-201ENST00000217133 SRYQ05066 204 aa8.15□□□□□ -1.1
TUBB1-201ENST00000217133 TMEM144Q7Z5S9 345 aa8.15□□□□□ -1.1
TUBB1-201ENST00000217133 C11orf42Q8N5U0 333 aa8.15□□□□□ -1.1
TUBB1-201ENST00000217133 SIGLECL1Q8N7X8 197 aa8.15□□□□□ -1.1
TUBB1-201ENST00000217133 ZNF114Q8NC26 417 aa8.15□□□□□ -1.1
TUBB1-201ENST00000217133 OR1L1Q8NH94 360 aa8.15□□□□□ -1.1
TUBB1-201ENST00000217133 ZDHHC16Q969W1 377 aa8.15□□□□□ -1.1
TUBB1-201ENST00000217133 CIB3Q96Q77 187 aaPredicted RBP8.15□□□□□ -1.1
TUBB1-201ENST00000217133 HSPB7Q9UBY9 170 aa8.15□□□□□ -1.1
TUBB1-201ENST00000217133 CACNA1DQ01668 2161 aa8.15□□□□□ -1.1
TUBB1-201ENST00000217133 ODAMA1E959 279 aa8.15□□□□□ -1.1
TUBB1-201ENST00000217133 FCN1O00602 326 aa8.15□□□□□ -1.1
TUBB1-201ENST00000217133 GDF9O60383 454 aa8.15□□□□□ -1.1
TUBB1-201ENST00000217133 CATR1Q13166 79 aa8.15□□□□□ -1.1
TUBB1-201ENST00000217133 GCSAMLQ5JQS6 135 aa8.15□□□□□ -1.1
TUBB1-201ENST00000217133 COLCA1Q6ZS62 124 aa8.15□□□□□ -1.1
TUBB1-201ENST00000217133 H2BFWTQ7Z2G1 175 aa8.15□□□□□ -1.1
TUBB1-201ENST00000217133 MRPL18Q9H0U6 180 aaKnown RBP8.15□□□□□ -1.1
TUBB1-201ENST00000217133 KCNIP2Q9NS61 270 aa8.15□□□□□ -1.1
TUBB1-201ENST00000217133 KCNIP1Q9NZI2 227 aa8.15□□□□□ -1.1
TUBB1-201ENST00000217133 URB1O60287 2271 aaKnown RBP8.15□□□□□ -1.11
TUBB1-201ENST00000217133 IGHV1-45A0A0A0MS14 117 aa8.15□□□□□ -1.11
TUBB1-201ENST00000217133 IGHV5-10-1A0A0J9YXX1 117 aa8.15□□□□□ -1.11
TUBB1-201ENST00000217133 LRRC30A6NM36 301 aa8.15□□□□□ -1.11
TUBB1-201ENST00000217133 RAMP3O60896 148 aa8.15□□□□□ -1.11
TUBB1-201ENST00000217133 IGLV2-14P01704 120 aa8.15□□□□□ -1.11
TUBB1-201ENST00000217133 GDF1P27539 372 aa8.15□□□□□ -1.11
TUBB1-201ENST00000217133 EPHA8P29322 1005 aaPredicted RBP8.15□□□□□ -1.11
TUBB1-201ENST00000217133 CDKN1AP38936 164 aa8.15□□□□□ -1.11
TUBB1-201ENST00000217133 SAP25Q8TEE9 199 aa8.15□□□□□ -1.11
TUBB1-201ENST00000217133 OR5P3Q8WZ94 311 aa8.15□□□□□ -1.11
TUBB1-201ENST00000217133 OR2D2Q9H210 308 aa8.15□□□□□ -1.11
TUBB1-201ENST00000217133 TUBG2Q9NRH3 451 aa8.15□□□□□ -1.11
TUBB1-201ENST00000217133 OCIAD1Q9NX40 245 aa8.15□□□□□ -1.11
TUBB1-201ENST00000217133 ZNF586Q9NXT0 402 aa8.15□□□□□ -1.11
TUBB1-201ENST00000217133 A0A0G2JMM0 328 aa8.14□□□□□ -1.11
TUBB1-201ENST00000217133 IGHV3-64DA0A0J9YX35 117 aa8.14□□□□□ -1.11
TUBB1-201ENST00000217133 A0A1W2PPB8 328 aa8.14□□□□□ -1.11
TUBB1-201ENST00000217133 A0A1W2PQM1 296 aa8.14□□□□□ -1.11
TUBB1-201ENST00000217133 A0A1W2PRS3 328 aa8.14□□□□□ -1.11
TUBB1-201ENST00000217133 OR5B21A6NL26 309 aa8.14□□□□□ -1.11
TUBB1-201ENST00000217133 KIR3DP1A8MWS1 328 aa8.14□□□□□ -1.11
TUBB1-201ENST00000217133 TMPRSS2O15393 492 aa8.14□□□□□ -1.11
TUBB1-201ENST00000217133 RBFOX2O43251 390 aaKnown RBP eCLIP8.14□□□□□ -1.11
TUBB1-201ENST00000217133 RHBDL1O75783 438 aa8.14□□□□□ -1.11
TUBB1-201ENST00000217133 CA6P23280 308 aa8.14□□□□□ -1.11
TUBB1-201ENST00000217133 PDLIM3Q53GG5 364 aaPredicted RBP8.14□□□□□ -1.11
TUBB1-201ENST00000217133 TPTE2P1Q5T6R2 138 aa8.14□□□□□ -1.11
TUBB1-201ENST00000217133 MRPL14Q6P1L8 145 aaKnown RBP8.14□□□□□ -1.11
TUBB1-201ENST00000217133 TEX43Q6ZNM6 134 aa8.14□□□□□ -1.11
TUBB1-201ENST00000217133 GGNQ86UU5 652 aa8.14□□□□□ -1.11
TUBB1-201ENST00000217133 TXN2Q99757 166 aa8.14□□□□□ -1.11
TUBB1-201ENST00000217133 A8MXE2 369 aa8.14□□□□□ -1.11
TUBB1-201ENST00000217133 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP8.14□□□□□ -1.11
TUBB1-201ENST00000217133 UMODP07911 640 aa8.14□□□□□ -1.11
TUBB1-201ENST00000217133 WNT2P09544 360 aa8.14□□□□□ -1.11
TUBB1-201ENST00000217133 RAB7AP51149 207 aa8.14□□□□□ -1.11
TUBB1-201ENST00000217133 HTD2P86397 168 aa8.14□□□□□ -1.11
TUBB1-201ENST00000217133 NINJ1Q92982 152 aa8.14□□□□□ -1.11
TUBB1-201ENST00000217133 DNAJC4Q9NNZ3 241 aa8.14□□□□□ -1.11
TUBB1-201ENST00000217133 MRPS18CQ9Y3D5 142 aaKnown RBP8.14□□□□□ -1.11
TUBB1-201ENST00000217133 CEP192Q8TEP8 1941 aa8.14□□□□□ -1.11
TUBB1-201ENST00000217133 AHCTF1Q8WYP5 2266 aa8.13□□□□□ -1.11
TUBB1-201ENST00000217133 S1PR2O95136 353 aa8.13□□□□□ -1.11
TUBB1-201ENST00000217133 RFPL3SP0C7P2 107 aa8.13□□□□□ -1.11
TUBB1-201ENST00000217133 IER3P46695 156 aa8.13□□□□□ -1.11
TUBB1-201ENST00000217133 B3GALT5-AS1P59052 145 aa8.13□□□□□ -1.11
TUBB1-201ENST00000217133 IGFBP7Q16270 282 aa8.13□□□□□ -1.11
TUBB1-201ENST00000217133 OR1L6Q8NGR2 347 aa8.13□□□□□ -1.11
TUBB1-201ENST00000217133 IMMP1LQ96LU5 166 aa8.13□□□□□ -1.11
TUBB1-201ENST00000217133 PRRG4Q9BZD6 226 aa8.13□□□□□ -1.11
TUBB1-201ENST00000217133 NPIPB11E5RHQ5 1161 aa8.13□□□□□ -1.11
TUBB1-201ENST00000217133 COX6A1P12074 109 aa8.13□□□□□ -1.11
TUBB1-201ENST00000217133 CHRNB4P30926 498 aa8.13□□□□□ -1.11
TUBB1-201ENST00000217133 YPEL3P61236 119 aaPredicted RBP8.13□□□□□ -1.11
TUBB1-201ENST00000217133 SUMO1P63165 101 aaKnown RBP8.13□□□□□ -1.11
TUBB1-201ENST00000217133 WIPI2Q9Y4P8 454 aa8.13□□□□□ -1.11
TUBB1-201ENST00000217133 SNURFLB1AK76 121 aa8.13□□□□□ -1.11
TUBB1-201ENST00000217133 DIRC3C9JPN6 131 aa8.13□□□□□ -1.11
TUBB1-201ENST00000217133 SLC17A3O00476 420 aa8.13□□□□□ -1.11
TUBB1-201ENST00000217133 NXPH2O95156 264 aa8.13□□□□□ -1.11
TUBB1-201ENST00000217133 OR2H2O95918 312 aa8.13□□□□□ -1.11
TUBB1-201ENST00000217133 MRPS11P82912 194 aaKnown RBP8.13□□□□□ -1.11
TUBB1-201ENST00000217133 RPL19P84098 196 aaKnown RBP8.13□□□□□ -1.11
TUBB1-201ENST00000217133 SPATA46Q5T0L3 261 aa8.13□□□□□ -1.11
TUBB1-201ENST00000217133 TMPRSS7Q7RTY8 843 aa8.13□□□□□ -1.11
TUBB1-201ENST00000217133 LRFN3Q9BTN0 628 aa8.13□□□□□ -1.11
TUBB1-201ENST00000217133 QTRT1Q9BXR0 403 aaKnown RBP8.13□□□□□ -1.11
TUBB1-201ENST00000217133 MPC1Q9Y5U8 109 aa8.13□□□□□ -1.11
TUBB1-201ENST00000217133 USF3Q68DE3 2245 aa8.12□□□□□ -1.11
TUBB1-201ENST00000217133 FRYQ5TBA9 3013 aa8.12□□□□□ -1.11
TUBB1-201ENST00000217133 SCO2A0A1W2PP80 73 aa8.12□□□□□ -1.11
TUBB1-201ENST00000217133 CD1BP29016 333 aa8.12□□□□□ -1.11
TUBB1-201ENST00000217133 OR4B1Q8NGF8 309 aa8.12□□□□□ -1.11
TUBB1-201ENST00000217133 OCC1Q8TAD7 63 aa8.12□□□□□ -1.11
TUBB1-201ENST00000217133 FOXJ2Q9P0K8 574 aa8.12□□□□□ -1.11
TUBB1-201ENST00000217133 LOC102723996A0A087X1L8 192 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms